Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01207 ATGGTTTCAAGATCTTATTCAAATCTAGTGGAGTTAGCTTCTGGTGAAACTCCATCATTTGGTTTAGTAAACAGAAGAATTCCAAGGATTATGACTGTTGCTGGTTTGATATCTGATGTTAATGTTGATGATGATCAAGTGGAGAGTGTGGCTTCTGATCTATCTTCTTCTTCGGTGCACCGCGACCGAATCATAATAGTGGCTAATCAGCTTCCTATAAAAGCTCAAAAGAATCAAGATGGTAATAGGAGTTTTTGGTCTTTTGATTGGGATGAAGATTCATTACTTCAATTGAAAGATGGAATAGGTGATGAAGATATTGAGGTTATTTATGTTGGTTGCTTAAAAGAAGATGTTCCTTTAAATGAACAAGATGAGGTTTCAATGATACTTCTTGAGAATTACAAATGTGTCCCTACTTTTCTTCCACCTGAGATGTTTACTAAGTACTATCATGGTTTTTGTAAACAACAATTATGGCCACTTTTTCATTACATGTTACCTTTGTCGCCGGGACTCGGTGGTAGGTTTAATAGGTCTTTGTGGCAAGCTTATGTATCTGTTAATAAGATTTTTGCTGATAGGATTATGGAAGTTATTAACCCTGAAGATGATTATGTTTGGATACATGATTATCATCTTATGGTGTTACCAACTTTCTTGAGGAAGAGGTTTAATAGAGTGAAACTCGGTTTTTTCCTTCATAGTCCATTTCCTTCATCAGAAATCTACAAAACATTGCCTATTAGGGAAGAGCTCTTGAGAGCTTTACTTAATTCCGATTTGATCGGATTTCATACTTTTGATTATGCACGGCATTTCCTCTCGTGTTGCAGTCGGATGTTAGGTCTTACCTATGAATCAAAGCGAGGGTATATTGGGATTGAGTATTATGGTAGGACGGTTAATATCAAGATTCTTCCTGTTGGTATACATATGGGTCAGATTCAATCGGTTTTGAGGCTGCCAGAAACCGAGGAAAAAGTTTGCGAGCTCATTCAACAGTTTTCTGATCAAGGTAGGACAATGCTGCTTGGTGTGGATGATATGGATATATTTAAGGGGATAAGTTTGAAGCTTTTGGCCATGGAGCAGCTTCTCGTTCAGCATCCTGAGTATCGTGGAAAAGTGGTATTGGTTCAGATAGCGAATCCTGCTAGGGGACGAGGGAAAGATGTGAAAGAAATGCAAGATGAGACGAAGGCAACGGCAAAACGGATCAACGAAACATTTGGGAGACCAGGGTATGATCCTGTTATTTTGATTGAGAAGCCGTTGAAGTTTTATGAGAGAGTTGCTTACTATGTTGTTGCCGAGTGTTGTTTAGTCACTGCAGTAAGAGATGGAATGAATCTCATACCGTACGAATATATAGTCGGTCGTCAAGGAAACGAAACATTGGATAAAGTTTTGAAAATAGGTTCCTCCCTTAAGAAAAAAAGCACGTTAGTTGTGTCTGAATTCATCGGCTGTTCTCCGTCTTTAAGTGGAGCAATCAGAGTGAACCCGTGGAATATCGATGCTGTGGCGGATGCGATGGATTCTGCGTTAGGAATGGCTGATTCAGAAAAAGAGCTTCGGCATGAAAAGCATTATAGATATGTTAGTACTCATGATGTCGGGTATTGGGCTCGGAGCTTTTTACAAGATTTGGAAAGGGCTTGTTGTGATCATGTACGACGAAGGTGGTGGGGAATTGGGTTTGGATTAAGTTTTAAAGTCGTAGCACTCGACCCAAACTTTAGGAAGCTCTCAATGGATCACATAGTTTCTGCTTACAAAAGGACAACAAATAGGGCTATCCTTCTAGACTATGATGGTACACTAATGCCTCAGGTTTCTATTAATAAGAGTCCAATAGGTAAATCCATCGAAATTCTTAATAGCTTGTGTAGAGATAAGAACAACGTGGTGTTTCTTGTTAGTGCCAGAAGCCGAACAACACTCTCTGAATGGTTTTCTCCTTGCGAGAATTTGGGAATCGCAGCCGAGCACGGTTACTTTCTGAGAATGAAGCGAGACGATGAATGGGAAACTTGTGTTCCTGCAACAGATTGTAGTTGGAAACAAATTGCAGTGCCTGTGATGAAACTTTATACCGAAACAACTGATGGATCCACCATTGAAGATAAGGAGACTGCACTTGTTTGGTGTTATGAAGATGCAGATCCAGATTTTGGATCATGCCAAGCTAAGGAGCTTCTCGATCATCTCGAGAGTGTTCTGGCAAATGAACCTGTAACTGTCAAAAGTGGCCAGAATTATGTAGAGGTTAAACCGCAGGGTGTGAGCAAGGGATTAGTGGCGACACGCCTATTTTCATCGATGCAAGAAACGGGAATGTCACCTGATTTTGTTTTGTGTATAGGAGATGACAGATCTGATGAAGATATGTTTGAGGTTATCACGAGTTCGATGAACGGTCCAATAGCGCCGAAAGCTGAAGTATTTGCTTGCACCGTTTGTCGGAAACCAAGTAAGGCTAAGTACTATCTTGATGATACTGCTGAAATAGTGAGATTGATTCAAGGTTTAGCATGTGTTTCAGATAAAAAAAGTTTATGCTAA 2568 0.3991 MVSRSYSNLVELASGETPSFGLVNRRIPRIMTVAGLISDVNVDDDQVESVASDLSSSSVHRDRIIIVANQLPIKAQKNQDGNRSFWSFDWDEDSLLQLKDGIGDEDIEVIYVGCLKEDVPLNEQDEVSMILLENYKCVPTFLPPEMFTKYYHGFCKQQLWPLFHYMLPLSPGLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVNIKILPVGIHMGQIQSVLRLPETEEKVCELIQQFSDQGRTMLLGVDDMDIFKGISLKLLAMEQLLVQHPEYRGKVVLVQIANPARGRGKDVKEMQDETKATAKRINETFGRPGYDPVILIEKPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVGRQGNETLDKVLKIGSSLKKKSTLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALGMADSEKELRHEKHYRYVSTHDVGYWARSFLQDLERACCDHVRRRWWGIGFGLSFKVVALDPNFRKLSMDHIVSAYKRTTNRAILLDYDGTLMPQVSINKSPIGKSIEILNSLCRDKNNVVFLVSARSRTTLSEWFSPCENLGIAAEHGYFLRMKRDDEWETCVPATDCSWKQIAVPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNYVEVKPQGVSKGLVATRLFSSMQETGMSPDFVLCIGDDRSDEDMFEVITSSMNGPIAPKAEVFACTVCRKPSKAKYYLDDTAEIVRLIQGLACVSDKKSLC 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01207 855 FunFam Alpha,alpha-trehalose-phosphate synthase 319 536 - -
Trre2g01207 855 Gene3D - 727 854 IPR023214 -
Trre2g01207 855 Gene3D - 598 726 IPR023214 -
Trre2g01207 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 317 - -
Trre2g01207 855 Gene3D Glycogen Phosphorylase B; 318 536 - -
Trre2g01207 855 CDD GT20_TPS 63 552 IPR001830 GO:0003824|GO:0005992
Trre2g01207 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 598 715 - -
Trre2g01207 855 Pfam Glycosyltransferase family 20 63 552 IPR001830 GO:0003824|GO:0005992
Trre2g01207 855 CDD HAD_TPP 600 840 - -
Trre2g01207 855 Gene3D Glycogen Phosphorylase B; 55 317 - -
Trre2g01207 855 NCBIfam trehalose-phosphatase 598 845 IPR003337 GO:0003824|GO:0005992
Trre2g01207 855 NCBIfam HAD-IIB family hydrolase 601 802 IPR006379 -
Trre2g01207 855 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 846 IPR001830 GO:0003824|GO:0005992
Trre2g01207 855 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 555 - -
Trre2g01207 855 Pfam Trehalose-phosphatase 602 835 IPR003337 GO:0003824|GO:0005992
Trre2g01207 855 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 728 854 - -
Trre2g01207 855 SUPERFAMILY HAD-like 599 846 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01207 Trre-Chr2 9751034 9754442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01207 1 851 Trehalose Biosynthesis Gene Families AT1G68020 80.347 0.0 1438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01207 K16055 - gmx:100818822 1521.14