Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01164 ATGGAAAGAGATTTTATGGGTCTATCCTCAAAAGAATCATTACCTATTGCAAAACAAGAGATTAACAATGAAGGCTTCAAAGACTCAGGAGGTTTTACAAAAGTTTCGGCAGTAAAATGGCCGTTCATGAACAAAGTTTCTGGTCATCCATATTTGATGCCTTTTAATGTTTCCGAAGAAGATAAGGCTAAAATGACATCTTCTGGTTTCATAGAGAAATCTTTCAAACATGATGGACAAGGTGGCTTTCATTTTTCCGCAAATCCGTATCATGTACAACATGATGTGAATTATATGAATCGTCCTCATGATGCAAAGATGTTTTCAGTTTCCAATCAAGCAATTTCAGTTTCTGCGGGACATTCGTTCCTAAAGAATCATTATGCAACTTTTGGTCAGAACATGAATGGCGCTAATGTGAAGCAACCACTACTTGGGGGATTCTCTGTTACAAAACCTCATCCAGTTCTTCCAATCGGTGGTACCGTTGCTGGTTTGACCGAACCATGTGTGAAACCATCTGCGCCTGCTTCTCAACTTACCATGTTCTATGCCGGTACTGTGAACATCTTCAATGATATCACTCCTGAGAAGGCACAAGCCATCATGTTGTTGGCTGGAAGTGGCATATCTGCAGCTTCAAACATGGTTCAATCTGAAGTTCCGGTACCTAGTTCAAAGTTCGCGTCGGGTGATGATGGTGTGCCTATGAGTCCACCTGTAAATATACCACCCTCCTCTGGTATTTCTAGTCCTTTATCTGTTTCTTCACACACCGGTCCACAGTCAGGGAGTGGCTCAAGTAGTAGTGATGAATTTCTTGCTGCTAAAACATCTAGAGGTCCTACTCCTACAACTTCTGCTAGCAAAGTGGAGACTCCAAAAGTACTCGATGCAACCACCATGTTTCCGTCAGCTATACCGCAGGCTCGCAAAGCATCATTGGCTCGATTTTTGGAGAAACGCAAGGAGAGGGTGATGAGTGCAGCACCATATAACCTCAACAACAAGAAATCCGAGGATGCTCCAATGCCAAATTCAATGGTTGCAGCGAAGCAAGGATAA 1065 0.4263 MERDFMGLSSKESLPIAKQEINNEGFKDSGGFTKVSAVKWPFMNKVSGHPYLMPFNVSEEDKAKMTSSGFIEKSFKHDGQGGFHFSANPYHVQHDVNYMNRPHDAKMFSVSNQAISVSAGHSFLKNHYATFGQNMNGANVKQPLLGGFSVTKPHPVLPIGGTVAGLTEPCVKPSAPASQLTMFYAGTVNIFNDITPEKAQAIMLLAGSGISAASNMVQSEVPVPSSKFASGDDGVPMSPPVNIPPSSGISSPLSVSSHTGPQSGSGSSSSDEFLAAKTSRGPTPTTSASKVETPKVLDATTMFPSAIPQARKASLARFLEKRKERVMSAAPYNLNNKKSEDAPMPNSMVAAKQG 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01164 354 MobiDBLite consensus disorder prediction 224 293 - -
Trre2g01164 354 MobiDBLite consensus disorder prediction 329 354 - -
Trre2g01164 354 SMART tify_2 173 208 IPR010399 -
Trre2g01164 354 Pfam tify domain 175 207 IPR010399 -
Trre2g01164 354 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 118 341 IPR040390 -
Trre2g01164 354 MobiDBLite consensus disorder prediction 247 293 - -
Trre2g01164 354 ProSiteProfiles Tify domain profile. 173 208 IPR010399 -
Trre2g01164 354 Pfam Jas motif 308 332 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01164 Trre-Chr2 9302571 9305964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01164 38 342 Tify Gene Family AT3G17860 35.890 6.12e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Trre2g01164 tify 7.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01164 K13464 - gmx:100787821 350.903