Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre2g01154 | ATGTTGGCGACCACAATCTCAATCCTAACACCCTCTTCCAACCTCAACCCTCCTCATTTCCCGCCCTTAACAACAACCAGAGTCACACTCTCACCCTATTCTTCAAAATCACTCTCCAAACTCCCTCTTCTTGCCAGGCTCAGTCACAGTATCAACAGTAACGGTGGTGGTCCTGATCGCGCCGTTGGTCCCACCTCACCTGAAATTGATGAAGTAGAAAGTGAAACATCTTCTGACTTTGGTGATAGCTATGTGGCCTTGTTTGTTCGTATGCTAGGCCTAGATCACGGTCCACCTGATAGAGAACAAGCTATAATTACTCTTTGGCAATATTCACTTGGTGGAAAAAAGTGCATTGACAATATAATGCAATATCCTGGTTGTATTAATCTTGTTGTCAACCTCCTTAGGTCAGAGTCTAGTACGTCCTGCGAGGCAGCTGCAGGCCTTCTGCGTTCGGTATCTTCAATCGACCTATATAGAGATTCTGTAGCAGATAGTGGAGCTATAGAAGAGATAAATAGATTGCTGACTCAATCTGACTTGGCTCTTGAGGTAACCGTGCAGAGTCTGAATATACTGTGGAATTTATCTTTTGATGGGAAGCTCCGTGTTAAACTTGCAAAGAGTGACATTCATTTGTTAGCTATTAAGTACCTTGATGATGAAGATAAGATAGTGAAAGAAGCTGCAGCAGGTGTTTTGGCGAATTTAGCATTGAGCCAAGTTAACCACGACATAATGGTTGAAGCAGGTGTTATTCCGAAATTGGCAAAGTTCTTAACATCTGACTCAGAAGGATCTCCAGTCATTAGAAAGGAAGCAAGGAACGCATTGCTTGAACTTGCGAAGGACGATTATTACAGAATTCTTGTTATCGAGGAAGGTTTAGTTCCTGTGCCATTAATAGGTGCTGCAGCCTATAAGTCATACATTCCGCATAAATATGAGCCGCTTGTATTTCCAGATGGTACAGAAATTGAAAAGACTTATAACAAACCTTCTAAATATGGCGCGTCAGAATTTCTTTTTGGATTAAATGTCGATAATAATGCTAACATAGATGAAGCAAAAATCAACGCAATTATCGGCCAGACACAACAGCAATTCCTTGTTAGTGCCGGTGCTATAGAAAGGGAAGAAACAGAACCTCGTTCTGAAAGTTCAGATGATCAACAGCGTCTTACACTTTTACATTGGATTGATGGTGTTGCTCGTTTAGTACTGATACTAGAACTAGAAGATATGGCAGCAATAATAAGAGCTGCAGAGTCAATTGCTAGTGCATGTATCAACGAACATATGCGTATTGCATTCAAGGAGGCTGGTGCAGTTAATCATTTACTACGGCTTTTGTCTTCCGATGATAATGCAGTCCAGCTGGCAGCAACTCAAGCTTTGGAAAAGCTGGCTGTTAGCAATGTTGTTTGTCGTGTAATTGAAGCTGAGGGTGGTTTAGGTCCTTTAGCTAGTATTTTAAAATGCTCAGACGTATCCGGAGCTATTGTGGAAAAGTCTTTGAACGTACTTGCTCAGATATTAGACCCTAATAAAGCGATGCAATTGAAGTTTTATGATGGACCAGTTAATGGATCTGAAAAGGCATTTGGTGGAGACAACAATGATGGTTCAACGGGATTAAGTAGCACTGACCAAGCCGTATCGGAAACAAAGCCAAGGAACGATATACTGGACTCGGTTTTCACTGCACGCCTTGTTGAGCTTTTAAAGTGCTCTTCACCCAGTTTACAAGAAAAGGCTGCATCTGTTCTGGAGTTTGTGGCATTGGCGGACCCAACACTGGCTCCAATTATATCCGTGGATATTGAAAATGGTCTCAATTATGCTTTTCAGCAAAACTTCTCGAAAATTTCAGCAGACACAGAATCTGATGTGGAAGATCAGTTTTCAGCGGCATATGCTATTAAATTTGAAGAAGCTGGTCTTGCAATATCTGCAGCATCCCGGTTATTGACAAGACTACTTGACTCTAAGCAGTTTTGCGACAAATTAAATTTCTCCCGTTTCATTGACACGCTCCGCGAAATCCTCAAGTCCAATATTCCCCTACACAGTAAAGATTGGGTAGCTGCTTGTCTAGTTAAACTAAGTTCTCTCTCTGATTACGACATGAGTTCTAATCCAATCAATGTGGAAGTTACACTTTATGAGAAAATTCCAAGACTTGTAGAACAGATCAAAACTTCATTCTCCTTAGAAGCACAGGAAAATGCTGTTGTAGAACTTAATAGAATAGTATCTGAAGGGGTGGTAGATTCCACAGTGGCTATTATTTCTGAAGGGGCGGTGTATCCTTTGGTGAAACTTATTGAAGAAGGTAGTGCAAAAGGCGTTGAAGCAAGCTTGACAATACTGTATAATCTGAGTATGGACAGTGAGAACCATGCAGCACTTGTAGCTGCTGGAGCAGTTCCAGCTTTAAAAAGAATTGTTCTGTCAGAAAAACCACAGTGGCAAAAGGCACTTCATTTGCTCAGGAGTTTGCAAACATGA | 2514 | 0.4133 | MLATTISILTPSSNLNPPHFPPLTTTRVTLSPYSSKSLSKLPLLARLSHSINSNGGGPDRAVGPTSPEIDEVESETSSDFGDSYVALFVRMLGLDHGPPDREQAIITLWQYSLGGKKCIDNIMQYPGCINLVVNLLRSESSTSCEAAAGLLRSVSSIDLYRDSVADSGAIEEINRLLTQSDLALEVTVQSLNILWNLSFDGKLRVKLAKSDIHLLAIKYLDDEDKIVKEAAAGVLANLALSQVNHDIMVEAGVIPKLAKFLTSDSEGSPVIRKEARNALLELAKDDYYRILVIEEGLVPVPLIGAAAYKSYIPHKYEPLVFPDGTEIEKTYNKPSKYGASEFLFGLNVDNNANIDEAKINAIIGQTQQQFLVSAGAIEREETEPRSESSDDQQRLTLLHWIDGVARLVLILELEDMAAIIRAAESIASACINEHMRIAFKEAGAVNHLLRLLSSDDNAVQLAATQALEKLAVSNVVCRVIEAEGGLGPLASILKCSDVSGAIVEKSLNVLAQILDPNKAMQLKFYDGPVNGSEKAFGGDNNDGSTGLSSTDQAVSETKPRNDILDSVFTARLVELLKCSSPSLQEKAASVLEFVALADPTLAPIISVDIENGLNYAFQQNFSKISADTESDVEDQFSAAYAIKFEEAGLAISAASRLLTRLLDSKQFCDKLNFSRFIDTLREILKSNIPLHSKDWVAACLVKLSSLSDYDMSSNPINVEVTLYEKIPRLVEQIKTSFSLEAQENAVVELNRIVSEGVVDSTVAIISEGAVYPLVKLIEEGSAKGVEASLTILYNLSMDSENHAALVAAGAVPALKRIVLSEKPQWQKALHLLRSLQT | 837 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre2g01154 | 837 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 443 | 485 | IPR000225 | GO:0005515 | |
| Trre2g01154 | 837 | SUPERFAMILY | ARM repeat | 88 | 303 | IPR016024 | - | |
| Trre2g01154 | 837 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 168 | 198 | IPR000225 | GO:0005515 | |
| Trre2g01154 | 837 | Gene3D | - | 79 | 307 | IPR011989 | - | |
| Trre2g01154 | 837 | MobiDBLite | consensus disorder prediction | 535 | 558 | - | - | |
| Trre2g01154 | 837 | SMART | arm_5 | 757 | 797 | IPR000225 | GO:0005515 | |
| Trre2g01154 | 837 | SMART | arm_5 | 241 | 284 | IPR000225 | GO:0005515 | |
| Trre2g01154 | 837 | SMART | arm_5 | 798 | 837 | IPR000225 | GO:0005515 | |
| Trre2g01154 | 837 | SMART | arm_5 | 555 | 596 | IPR000225 | GO:0005515 | |
| Trre2g01154 | 837 | SMART | arm_5 | 432 | 472 | IPR000225 | GO:0005515 |
Showing 1 to 10 of 18 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre2g01154 | - | - | gmx:100793128 | 1070.07 |
Showing 1 to 1 of 1 entries