Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g01144 | ATGACAACAACTTCCACTTCATTACACACTTTAGCAGTGAACCAAACGATCCGAGATGGTGGTGGTGAGAGTTTAGTTTCAGTAAGTGGGATCACTGAATTAGGTTTCTTCAGCCCCGGGAGTTCAAAAGGTCGATATTTGGGTGTATGGTACAGGAATGTAACCCCTTTAACAGTCATATGGGTGGCCAATAGAGAAACACCTCTAAAAAACCATTCAGGAGTGTTAAAGCTCAATCCAAACGGGATTTTTCAGCTTCGCAATGGCCCTGCTAACGGCGCTATAATTTGGTCATCGAATACTACAACAAGCAAATCAGGGAATCTGAATAATCCTATAGCTCGGCTCCTTGATTCAGGAAATTTGGTAGTGAAAAATGGACAGCAAACTGATGAGTTTTTGTGGCAGAGTTTTGATTATCCCTCTGATACATTGATGTCCGGAATGAAACTTGGATGGAACTTAGAAATTGGTCTAGAAAGATTCACATCATCATGGAAAAGTGATGATGACCCTGCTGAGGGAGAATATGCTATGAAACTTGACCTTAGAGGATATCCTCAGATAATTATATTCAAAGGGTCTGATATAGATACTAGACCAGGGCCATGGGTCGGCGAGTTCATTGCTGGATCTCAAGAACCAACTCCGGGAGCGGAGCAGAGATTTGTGTTCAATGAAAAAGAAGTGTATTATGAATACGAGAGTAATGAAAGCTCAACTATCGCGTTAACTAAACTGGCTCCTTCAGGTGATGAGCAGATTCTGTATTGGGTTGTTGGAACGGGCAATAGGCTAGTGTACTCAGATGGGAAGGATGAATGCGAAGACTACGCCTATTGTGGTACAAATTCTATATGCACCATGGATGGTAGCCTTCCAACTTGTGAGTGCTTGAAAGGGTATGTTCCCAAGATTCCTCAACAGTGGAAGCTGTCTCACTGGAAAGACGGTTGTGTACCGAGGAATGAATCTAATTGCAAAAGCAGTACAGAGGGGTTCTTCAAGTACAGACACATGAAGTATCCAGATACATCTTCATCATGGTTTGATAAGAGCTTGAACCTCGAGGAATGTAAGGCGATGTGTCTCAGAAACTGTTCCTGTGTAGCCTATGCTAATTTAGATACCCGCAATGGCGGAACTGGGTGTCTTCTTTGGTTTAATTATCTTGTTGATGTGAGAGAATTCACTAAATGGGGACAAGATATTTATGTCAAAGTCCCTCTTTCAGAACTAGATGTAGATAACCATGGAAACATCAAGAAGATAGTCGGAATCACAGTTGCTGTGATTATTATTATTGGATTCATTACATGTGGATCGATATGTTGGATTAAAAATCGTCCAGGGGCTGCAAGAAATACTTTCAGTTTCAACAAGCGTTATGAAAGAAACCTAAGGAAGGAAGAAGATGTTGACTTGACAACATTCGATTTCTCGGTCTTGGCTTATGCCACTAACAACTTTTCAAGCAGTAACAAACTAGGAGAAGGTGGTTTTGGACCAGTATACAAGGGAATGTTGATGGATGGACAAGAGATAGCTGTGAAAAGACTTTCAAAAAGATCTGGACAAGGCTTGAAAGAATTTAAAAATGAAGTGGCACTGATTGCAAAACTTCAGCACCGTAATCTCATAAAGCTTCTTGGCTGTTGTATTCAAGGAGAAGAAACAATGTTGATCTATGAATACATGCCGAACAAAAGCTTGGACTACTTTGTTTTTGATGACACCAAAACGATGTCACTGGATTGGCTTAGGCGTTTCAATATTATTGGTGGCATTGCTCGAGGACTTCTTTATCTTCATCAAGACTCAAGAGTGAGGATTATTCACAGAGATCTAAAAACTAGCAATATATTACTAGACGTAAATATGGAGCCGAAAATATCAGACTTTGGCTTGGCTCGAATCTTTTTGGGGGACCAAATCGAGGAAAACACAAATAGAGTGGCTGGAACTTATGGCTACATATCTCCAGAGTATGCTGTCCATGGGCATTTCTCAGCGAAATCAGATGTATTTAGTTATGGCGTGATTGTACTAGAGATTGTAAGTGGGAAAAGGAATAGGGGATTTTCAAAACTCGAACAGTGCAATAATCTTCTTGGATATGCATGGAGATTATGGTCGGAAGAGAGAGCCCTGGAACTATTGGATGAAGTGTTACGGGAACAATATACAGCATTTGAAGTCATACGAAGTATACAGGTGGGCTTGTTATGTGTGCAACAAAGCCCAGAAGATAGACCAGACATGTCATCTGTGGTTCTAATGCTAAATGGTCAGAAAATATTGCCAGAGCCAACGTTTCCTGGCTTTTACGCGGAAAAAGATCTACGTACCGAATCAGATTCTTCAGTCGCAACTCACAAATTCTGCTCAACTAATGAAATATCCATTACAGAGTTAGATGCGAGATAG | 2427 | 0.4075 | MTTTSTSLHTLAVNQTIRDGGGESLVSVSGITELGFFSPGSSKGRYLGVWYRNVTPLTVIWVANRETPLKNHSGVLKLNPNGIFQLRNGPANGAIIWSSNTTTSKSGNLNNPIARLLDSGNLVVKNGQQTDEFLWQSFDYPSDTLMSGMKLGWNLEIGLERFTSSWKSDDDPAEGEYAMKLDLRGYPQIIIFKGSDIDTRPGPWVGEFIAGSQEPTPGAEQRFVFNEKEVYYEYESNESSTIALTKLAPSGDEQILYWVVGTGNRLVYSDGKDECEDYAYCGTNSICTMDGSLPTCECLKGYVPKIPQQWKLSHWKDGCVPRNESNCKSSTEGFFKYRHMKYPDTSSSWFDKSLNLEECKAMCLRNCSCVAYANLDTRNGGTGCLLWFNYLVDVREFTKWGQDIYVKVPLSELDVDNHGNIKKIVGITVAVIIIIGFITCGSICWIKNRPGAARNTFSFNKRYERNLRKEEDVDLTTFDFSVLAYATNNFSSSNKLGEGGFGPVYKGMLMDGQEIAVKRLSKRSGQGLKEFKNEVALIAKLQHRNLIKLLGCCIQGEETMLIYEYMPNKSLDYFVFDDTKTMSLDWLRRFNIIGGIARGLLYLHQDSRVRIIHRDLKTSNILLDVNMEPKISDFGLARIFLGDQIEENTNRVAGTYGYISPEYAVHGHFSAKSDVFSYGVIVLEIVSGKRNRGFSKLEQCNNLLGYAWRLWSEERALELLDEVLREQYTAFEVIRSIQVGLLCVQQSPEDRPDMSSVVLMLNGQKILPEPTFPGFYAEKDLRTESDSSVATHKFCSTNEISITELDAR | 808 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g01144 | 808 | CDD | STKc_IRAK | 496 | 763 | - | - | |
Trre2g01144 | 808 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 566 | 769 | - | - | |
Trre2g01144 | 808 | Pfam | Protein tyrosine and serine/threonine kinase | 493 | 759 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g01144 | 808 | ProSiteProfiles | PAN/Apple domain profile. | 327 | 409 | IPR003609 | - | |
Trre2g01144 | 808 | Pfam | S-locus glycoprotein domain | 200 | 305 | IPR000858 | GO:0048544 | |
Trre2g01144 | 808 | ProSiteProfiles | Bulb-type lectin domain profile. | 2 | 137 | IPR001480 | - | |
Trre2g01144 | 808 | Pfam | D-mannose binding lectin | 58 | 167 | IPR001480 | - | |
Trre2g01144 | 808 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 8 | 752 | - | - | |
Trre2g01144 | 808 | ProSiteProfiles | Protein kinase domain profile. | 490 | 772 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g01144 | 808 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 454 | 565 | - | - | |
Trre2g01144 | 808 | CDD | B_lectin | 20 | 141 | IPR001480 | - | |
Trre2g01144 | 808 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 3 | 138 | - | - | |
Trre2g01144 | 808 | ProSiteProfiles | EGF-like domain profile. | 271 | 308 | IPR000742 | - | |
Trre2g01144 | 808 | SUPERFAMILY | Protein kinase-like (PK-like) | 473 | 771 | IPR011009 | - | |
Trre2g01144 | 808 | Gene3D | Transferase(Phosphotransferase) domain 1 | 566 | 768 | - | - | |
Trre2g01144 | 808 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 59 | 172 | IPR036426 | - | |
Trre2g01144 | 808 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 611 | 623 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g01144 | 808 | Gene3D | Hepatocyte Growth Factor | 325 | 406 | - | - | |
Trre2g01144 | 808 | SMART | blect_4 | 16 | 141 | IPR001480 | - | |
Trre2g01144 | 808 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 326 | 408 | - | - | |
Trre2g01144 | 808 | SMART | serkin_6 | 490 | 739 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g01144 | 808 | Pfam | PAN-like domain | 327 | 394 | IPR003609 | - | |
Trre2g01144 | 808 | Gene3D | Phosphorylase Kinase; domain 1 | 464 | 565 | - | - | |
Trre2g01144 | 808 | CDD | PAN_AP_plant | 325 | 409 | - | - | |
Trre2g01144 | 808 | Gene3D | - | 4 | 138 | IPR036426 | - | |
Trre2g01144 | 808 | PIRSF | SRK | 1 | 808 | IPR024171 | GO:0004674 | |
Trre2g01144 | 808 | SMART | ntp_6 | 329 | 408 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g01144 | Trre-Chr2 | 9173139 | 9176256 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g01144 | 424 | 776 | Receptor kinase-like Gene Family | AT4G23190 | 53.591 | 9.33e-130 | 398 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Trre2g01144 | PK_Tyr_Ser-Thr | 5.9e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g01144 | - | - | gmx:100815430 | 1060.83 |