Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01144 ATGACAACAACTTCCACTTCATTACACACTTTAGCAGTGAACCAAACGATCCGAGATGGTGGTGGTGAGAGTTTAGTTTCAGTAAGTGGGATCACTGAATTAGGTTTCTTCAGCCCCGGGAGTTCAAAAGGTCGATATTTGGGTGTATGGTACAGGAATGTAACCCCTTTAACAGTCATATGGGTGGCCAATAGAGAAACACCTCTAAAAAACCATTCAGGAGTGTTAAAGCTCAATCCAAACGGGATTTTTCAGCTTCGCAATGGCCCTGCTAACGGCGCTATAATTTGGTCATCGAATACTACAACAAGCAAATCAGGGAATCTGAATAATCCTATAGCTCGGCTCCTTGATTCAGGAAATTTGGTAGTGAAAAATGGACAGCAAACTGATGAGTTTTTGTGGCAGAGTTTTGATTATCCCTCTGATACATTGATGTCCGGAATGAAACTTGGATGGAACTTAGAAATTGGTCTAGAAAGATTCACATCATCATGGAAAAGTGATGATGACCCTGCTGAGGGAGAATATGCTATGAAACTTGACCTTAGAGGATATCCTCAGATAATTATATTCAAAGGGTCTGATATAGATACTAGACCAGGGCCATGGGTCGGCGAGTTCATTGCTGGATCTCAAGAACCAACTCCGGGAGCGGAGCAGAGATTTGTGTTCAATGAAAAAGAAGTGTATTATGAATACGAGAGTAATGAAAGCTCAACTATCGCGTTAACTAAACTGGCTCCTTCAGGTGATGAGCAGATTCTGTATTGGGTTGTTGGAACGGGCAATAGGCTAGTGTACTCAGATGGGAAGGATGAATGCGAAGACTACGCCTATTGTGGTACAAATTCTATATGCACCATGGATGGTAGCCTTCCAACTTGTGAGTGCTTGAAAGGGTATGTTCCCAAGATTCCTCAACAGTGGAAGCTGTCTCACTGGAAAGACGGTTGTGTACCGAGGAATGAATCTAATTGCAAAAGCAGTACAGAGGGGTTCTTCAAGTACAGACACATGAAGTATCCAGATACATCTTCATCATGGTTTGATAAGAGCTTGAACCTCGAGGAATGTAAGGCGATGTGTCTCAGAAACTGTTCCTGTGTAGCCTATGCTAATTTAGATACCCGCAATGGCGGAACTGGGTGTCTTCTTTGGTTTAATTATCTTGTTGATGTGAGAGAATTCACTAAATGGGGACAAGATATTTATGTCAAAGTCCCTCTTTCAGAACTAGATGTAGATAACCATGGAAACATCAAGAAGATAGTCGGAATCACAGTTGCTGTGATTATTATTATTGGATTCATTACATGTGGATCGATATGTTGGATTAAAAATCGTCCAGGGGCTGCAAGAAATACTTTCAGTTTCAACAAGCGTTATGAAAGAAACCTAAGGAAGGAAGAAGATGTTGACTTGACAACATTCGATTTCTCGGTCTTGGCTTATGCCACTAACAACTTTTCAAGCAGTAACAAACTAGGAGAAGGTGGTTTTGGACCAGTATACAAGGGAATGTTGATGGATGGACAAGAGATAGCTGTGAAAAGACTTTCAAAAAGATCTGGACAAGGCTTGAAAGAATTTAAAAATGAAGTGGCACTGATTGCAAAACTTCAGCACCGTAATCTCATAAAGCTTCTTGGCTGTTGTATTCAAGGAGAAGAAACAATGTTGATCTATGAATACATGCCGAACAAAAGCTTGGACTACTTTGTTTTTGATGACACCAAAACGATGTCACTGGATTGGCTTAGGCGTTTCAATATTATTGGTGGCATTGCTCGAGGACTTCTTTATCTTCATCAAGACTCAAGAGTGAGGATTATTCACAGAGATCTAAAAACTAGCAATATATTACTAGACGTAAATATGGAGCCGAAAATATCAGACTTTGGCTTGGCTCGAATCTTTTTGGGGGACCAAATCGAGGAAAACACAAATAGAGTGGCTGGAACTTATGGCTACATATCTCCAGAGTATGCTGTCCATGGGCATTTCTCAGCGAAATCAGATGTATTTAGTTATGGCGTGATTGTACTAGAGATTGTAAGTGGGAAAAGGAATAGGGGATTTTCAAAACTCGAACAGTGCAATAATCTTCTTGGATATGCATGGAGATTATGGTCGGAAGAGAGAGCCCTGGAACTATTGGATGAAGTGTTACGGGAACAATATACAGCATTTGAAGTCATACGAAGTATACAGGTGGGCTTGTTATGTGTGCAACAAAGCCCAGAAGATAGACCAGACATGTCATCTGTGGTTCTAATGCTAAATGGTCAGAAAATATTGCCAGAGCCAACGTTTCCTGGCTTTTACGCGGAAAAAGATCTACGTACCGAATCAGATTCTTCAGTCGCAACTCACAAATTCTGCTCAACTAATGAAATATCCATTACAGAGTTAGATGCGAGATAG 2427 0.4075 MTTTSTSLHTLAVNQTIRDGGGESLVSVSGITELGFFSPGSSKGRYLGVWYRNVTPLTVIWVANRETPLKNHSGVLKLNPNGIFQLRNGPANGAIIWSSNTTTSKSGNLNNPIARLLDSGNLVVKNGQQTDEFLWQSFDYPSDTLMSGMKLGWNLEIGLERFTSSWKSDDDPAEGEYAMKLDLRGYPQIIIFKGSDIDTRPGPWVGEFIAGSQEPTPGAEQRFVFNEKEVYYEYESNESSTIALTKLAPSGDEQILYWVVGTGNRLVYSDGKDECEDYAYCGTNSICTMDGSLPTCECLKGYVPKIPQQWKLSHWKDGCVPRNESNCKSSTEGFFKYRHMKYPDTSSSWFDKSLNLEECKAMCLRNCSCVAYANLDTRNGGTGCLLWFNYLVDVREFTKWGQDIYVKVPLSELDVDNHGNIKKIVGITVAVIIIIGFITCGSICWIKNRPGAARNTFSFNKRYERNLRKEEDVDLTTFDFSVLAYATNNFSSSNKLGEGGFGPVYKGMLMDGQEIAVKRLSKRSGQGLKEFKNEVALIAKLQHRNLIKLLGCCIQGEETMLIYEYMPNKSLDYFVFDDTKTMSLDWLRRFNIIGGIARGLLYLHQDSRVRIIHRDLKTSNILLDVNMEPKISDFGLARIFLGDQIEENTNRVAGTYGYISPEYAVHGHFSAKSDVFSYGVIVLEIVSGKRNRGFSKLEQCNNLLGYAWRLWSEERALELLDEVLREQYTAFEVIRSIQVGLLCVQQSPEDRPDMSSVVLMLNGQKILPEPTFPGFYAEKDLRTESDSSVATHKFCSTNEISITELDAR 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01144 808 CDD STKc_IRAK 496 763 - -
Trre2g01144 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 566 769 - -
Trre2g01144 808 Pfam Protein tyrosine and serine/threonine kinase 493 759 IPR001245 GO:0004672|GO:0006468
Trre2g01144 808 ProSiteProfiles PAN/Apple domain profile. 327 409 IPR003609 -
Trre2g01144 808 Pfam S-locus glycoprotein domain 200 305 IPR000858 GO:0048544
Trre2g01144 808 ProSiteProfiles Bulb-type lectin domain profile. 2 137 IPR001480 -
Trre2g01144 808 Pfam D-mannose binding lectin 58 167 IPR001480 -
Trre2g01144 808 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 752 - -
Trre2g01144 808 ProSiteProfiles Protein kinase domain profile. 490 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01144 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 454 565 - -
Trre2g01144 808 CDD B_lectin 20 141 IPR001480 -
Trre2g01144 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 3 138 - -
Trre2g01144 808 ProSiteProfiles EGF-like domain profile. 271 308 IPR000742 -
Trre2g01144 808 SUPERFAMILY Protein kinase-like (PK-like) 473 771 IPR011009 -
Trre2g01144 808 Gene3D Transferase(Phosphotransferase) domain 1 566 768 - -
Trre2g01144 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 172 IPR036426 -
Trre2g01144 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Trre2g01144 808 Gene3D Hepatocyte Growth Factor 325 406 - -
Trre2g01144 808 SMART blect_4 16 141 IPR001480 -
Trre2g01144 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 326 408 - -
Trre2g01144 808 SMART serkin_6 490 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01144 808 Pfam PAN-like domain 327 394 IPR003609 -
Trre2g01144 808 Gene3D Phosphorylase Kinase; domain 1 464 565 - -
Trre2g01144 808 CDD PAN_AP_plant 325 409 - -
Trre2g01144 808 Gene3D - 4 138 IPR036426 -
Trre2g01144 808 PIRSF SRK 1 808 IPR024171 GO:0004674
Trre2g01144 808 SMART ntp_6 329 408 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01144 Trre-Chr2 9173139 9176256 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01144 424 776 Receptor kinase-like Gene Family AT4G23190 53.591 9.33e-130 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre2g01144 PK_Tyr_Ser-Thr 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01144 - - gmx:100815430 1060.83