LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre2g01141	ATGAACACTTATTATCATGTCATGGGATTGGTGTTGTTATTCATGGTTTACTTTGTTTTTGGAGCAACAAAAGCCAAGGTAATTAACTGTCCACAAGACATATCATGTGGAAATCAAGTTATCAAATTCCCTTTCCAAATCAAAAACCAAAATCCAACTTCACCTATGTGTGGTGGCTATCCAGGATTTGAGTTAATTTGTTCATCAAACCAAACAATGATTGAACTTCCTCACAAAGTGAAACTCAATGTCAAAAACATTGACTACAAGCACCAAACTATTCAACTTTTAGATCCACAAAAATGCCTTTACAAACATATCCACAACCTCAATCTTTCAGAATCTCATTTCAACTACTTGAAAAGTGATTATGATGATTTTATTGACTATCACTTTTTCAATTGTTCACTTTTGATTAGAAATGAAATAGATTCATATTTAGTTCCTTGTCTAAGCACCTCAACTTCTCAAACATTTGTTATACCCTCTTCTCTATATATTGAAGACCTTCCTCTCTCCTTTTGCACCAAAATGTTTAATGTTTCATTCAAACGTTCCGATTCTATTCGTTTGAGTTGGTCTGAGCCTAATTGTAAAGAGTGTGAATCAAAAGGAAACATATGTAGATGGAAGAATACTACTAGTAGTACCAACAAGAAAATTCATTGTTTCCCCAAAAACAAGAAAGGTTCTTCACCGGCTCTAGTCAACACAGGGTCAATTCTAGGATCATTGTTTTTTATCTTGCTGACTGGAGCAGCCTACCATATTTATGACTCCTACGTTCTGAAGAAAGCAAAACAAGCGATTATAGAAAAACAACCTAGGAGAAATGGTGGACTTGCAACTACTAGACAACTAACTCAAGAGTTGGATGTCATTGAAGAGTTAGAATGA	897	0.3456	MNTYYHVMGLVLLFMVYFVFGATKAKVINCPQDISCGNQVIKFPFQIKNQNPTSPMCGGYPGFELICSSNQTMIELPHKVKLNVKNIDYKHQTIQLLDPQKCLYKHIHNLNLSESHFNYLKSDYDDFIDYHFFNCSLLIRNEIDSYLVPCLSTSTSQTFVIPSSLYIEDLPLSFCTKMFNVSFKRSDSIRLSWSEPNCKECESKGNICRWKNTTSSTNKKIHCFPKNKKGSSPALVNTGSILGSLFFILLTGAAYHIYDSYVLKKAKQAIIEKQPRRNGGLATTRQLTQELDVIEELE	298

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre2g01141	298	Pfam	Wall-associated receptor kinase galacturonan-binding	30	98	IPR025287	GO:0030247
	Trre2g01141	298	PANTHER	RING/U-BOX SUPERFAMILY PROTEIN	12	270	IPR046948	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre2g01141	Trre-Chr2	9166921	9169616	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre2g01141	35	273	C3H Transcription Factor Family	AT2G25410	29.924	3.39e-22	93.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre2g01141	-		-	lja:Lj0g3v0257919.2	290.812