Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01119 ATGAAGAAGTTGGGAGCGGAGAGAAAGAAAGTGAGTGCAAGATCTGCTTCCCGTGAAATCTCCTTTTTTCAGGTGTTTCTTTTGATTTCTTTGGAGGGGAAAACAACGAAGATGAAGACTCCGAGCAAGAAAAACAAAAGTACTAAAGACAACAAGGGTAAAATCAATGGAGAAGGTGATTCATATATGTCCGAAAGCAATGTAGTTGATGATCTGCCTTTGGCCAAACGTAATGATGATCTACATTTGGTTAAAAGCAATAAAAGTGAAGATGGCGAGCAGGGCAAGAAGAAAAATAAAAAGAAGAAACTGAGTGAAGAAAGCAAACATAAGGAGTATAAGGAGTTCAAAAGCAATGAATGTGAAGATGATAACCAAGGAAAAAAGATGAAAAAGAAGCAGAAGCTAATTGAAGGAAACACACTGAAGGAGTGTAATGACTTTAGAAGCAATGGAGGTGAAGATGGTGGGCAAGACAAGAAGATGAAGAAAAAGAAACTAAGTGAAGAAAGTAAGCATAAGGAGTATAGCGAGTTTAGAAGCAATGAATGTGAAGATGATGGCCAAGGAAAGAAAATGAAGAAGAAACTAATTGAGGAAGGCAAACATAAGGAGTATAATGACATTATAAGCAATGAAGGTGGAGATGCTGACCAATGCAAGACGATGAAGAAGAATAAACTGAGTCACAAAAGGAAAAGTAAGGAGAATAATGATCAAGTCAAAAAGAAGAAAAAAAAGGAAGCAAAGGCGGTTACAAGCGAGTCTCCTAACTATGCACATAATGAATCTCCTAACTTAGAACCTAATGGATCATGCAAACCCAAACATGTAACTTTTTCTGATGAAGTGGAAATGGTCTGTTGTGATGGCTTATTACGTGGGAAAAGGTTTACACCCGAAGAAGATGAGAAGATCAAAGAGTCTGTTTTTGACTTTATAGATTCTCGTGGTTTGGGAGATAACGGCCTGGATAAGATTCTTCATTCCAAATCACACGCCGAGACTAGAGGCTGTTGGAAAATAATCGCAAAAGTCCTACCTCATAGGCCCATCCGTAGTGTGTGTCTACGTGCTCATAAGTTATTGGAAACTAGTGGGAGGTGTAGATGGACACCTGATGAGCTTAAATTTATACGGAAGTCCTACGAGCAACATGGAGCTAAATTCAGACTAGTAGCTGATGCTTTGGGTAAAAGTCGAGAACAAGTAAAAAGTGCGTGGCGTAGATTAAAATTTGAAAATGCAAAACTAGGACCATGGTCCCAAGAAGAGTATCAAACTTTATTTAATTTAGTAAACCTGGATCTGCGCGCAAGGTCTTCAGAGCCTTATAGAAAATCAAAACATGGTATGTTGCGAGATAATATTAGTTGGGATGCAATTGCTCACAAATTGGAAACCCGAAACAGTGCATTTTGCTGCCTGAGGTGGTATGATAAGTTAACATCGCCAATGGTTGCTACTGGTGATTGGTGTGATACTGACGACTTCCGCTTGATAAATGCGTTATATACTTTGGATGCTTGTTGCATGGAGGAGGTAAACTGGGACAAGCTACTTGAGCATAGGTCTGGTGACGTATGCAGAAAACGATGGGATCTAATGGTCAATCATATTGGGGAGCATGCAAGAAAGCCATTTATTGAGCAGGTTGAAATTCTCACAAAGAGATTCTGCCCTGACTTGTTGGAAGCAAGAGAGGCCTTTGACAACAAACCTGTGATTTGTTGA 1734 0.3939 MKKLGAERKKVSARSASREISFFQVFLLISLEGKTTKMKTPSKKNKSTKDNKGKINGEGDSYMSESNVVDDLPLAKRNDDLHLVKSNKSEDGEQGKKKNKKKKLSEESKHKEYKEFKSNECEDDNQGKKMKKKQKLIEGNTLKECNDFRSNGGEDGGQDKKMKKKKLSEESKHKEYSEFRSNECEDDGQGKKMKKKLIEEGKHKEYNDIISNEGGDADQCKTMKKNKLSHKRKSKENNDQVKKKKKKEAKAVTSESPNYAHNESPNLEPNGSCKPKHVTFSDEVEMVCCDGLLRGKRFTPEEDEKIKESVFDFIDSRGLGDNGLDKILHSKSHAETRGCWKIIAKVLPHRPIRSVCLRAHKLLETSGRCRWTPDELKFIRKSYEQHGAKFRLVADALGKSREQVKSAWRRLKFENAKLGPWSQEEYQTLFNLVNLDLRARSSEPYRKSKHGMLRDNISWDAIAHKLETRNSAFCCLRWYDKLTSPMVATGDWCDTDDFRLINALYTLDACCMEEVNWDKLLEHRSGDVCRKRWDLMVNHIGEHARKPFIEQVEILTKRFCPDLLEAREAFDNKPVIC 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01119 577 MobiDBLite consensus disorder prediction 37 56 - -
Trre2g01119 577 SUPERFAMILY Homeodomain-like 462 540 IPR009057 -
Trre2g01119 577 MobiDBLite consensus disorder prediction 232 252 - -
Trre2g01119 577 MobiDBLite consensus disorder prediction 72 211 - -
Trre2g01119 577 ProSiteProfiles Myb-like domain profile. 413 482 IPR001005 -
Trre2g01119 577 Gene3D - 411 486 - -
Trre2g01119 577 ProSiteProfiles Myb-like domain profile. 484 537 IPR001005 -
Trre2g01119 577 Pfam Myb-like DNA-binding domain 371 429 - -
Trre2g01119 577 MobiDBLite consensus disorder prediction 34 271 - -
Trre2g01119 577 PANTHER GB|AAC33480.1 32 576 - -
Trre2g01119 577 SMART sant 294 365 IPR001005 -
Trre2g01119 577 SMART sant 417 484 IPR001005 -
Trre2g01119 577 SMART sant 367 414 IPR001005 -
Trre2g01119 577 SUPERFAMILY Homeodomain-like 342 424 IPR009057 -
Trre2g01119 577 CDD SANT 370 412 IPR001005 -
Trre2g01119 577 Gene3D - 372 410 - -
Trre2g01119 577 MobiDBLite consensus disorder prediction 255 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01119 Trre-Chr2 8999841 9005882 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre2g01119 Myb_DNA-bind_6 2.9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01119 - - mtr:112416380 584.719