Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01110 ATGGGTGAATTAACATATTTTGAGAAAGCTAATGCATGGTTAAGAAATTCAAAGTCATATTTGCTAATAATTAGCTTACAATTTGGCTCAGCTGGCATGTATGTTCTTACCATGGATGCCCTTAATAAGGGCATGAGTCATTATATTTTTGTGGTATATCGTAATGTCATCGCCACTATAGCTCTTGCTCCCTTCGCATTTTTTCTTGAAAGGAAAATTAGGCCCAAGATGACAGTTCGGATATTCTCAGAAATATTTGCACTAGCTTTTGTTGAGATAATACTTGATCAGTGTTTCACGTTCTTGGGGATGAAGCTAACATCAGCGTCATTTGCATCTGCCGTGATGAATTCCGTACCATCTATTACCTTTGTACTTGCAATCATTTTTAGATTGGAGCGCATGAAAATTAAGGAGATAGGATGTCAAGCTAAAGTGATTGGCACAGTCGTGAGTTTGGGAGGTGCATTTCTAATGGCTTTATACAAAGGTCCAGTTCTACAAATTGCTGGGTCATCAGCAGCTACTCAAGTGCACCAGCCTGAAAATGTGAATGACCCTAGTGGTTCACATTGGCTCCTTGGTGCATTGTTCCTTCTCATTGGTTGCGCCGGCTTCTCTGCTTTCTACATTTTACAAGCCATAACATTAAGAAAGTATCCAGCAGAGATGTCACTAGCCACGTGGGTTTGTTTTATTGGTGCACTTCAAAGTAGTGCTGTGACAATTTTCATGGAGCGCAAAAGCCCTGATGCATGGGCTTTGGGCCTGGATTCAAGACTCTTCGCTTCGGTCTATGCGGGAATAGTAACTTCAGCAATTCAATTTTATGTGCAAGGCTCAGTAATTAAAACTATGGGCCCTGTTTTTGTGACTGCTTTTAATCCACTGCGTATGATTATAGTCACAGCCTTGGCTTGTATCTTCCTCTCGGAGAAACTCCACCTCGGAAGCATTGTTGGAGGAGTGGTAGTGGTTACAGGGTTATATCTTGTTGTATGGGGAAAATCCAAAGAACAAAAAAGAATAATGTTAGAAGAAGAGGCTCCACAAAAAATTTCCCAACAAGGACAACAACAACTACCAATAACTGTCCCCAAAGTTGATGTCAATGATAATAACAATAAACATCAATTGGTCATAGTTGGAGACCAAACAAGCACATAG 1167 0.4036 MGELTYFEKANAWLRNSKSYLLIISLQFGSAGMYVLTMDALNKGMSHYIFVVYRNVIATIALAPFAFFLERKIRPKMTVRIFSEIFALAFVEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLERMKIKEIGCQAKVIGTVVSLGGAFLMALYKGPVLQIAGSSAATQVHQPENVNDPSGSHWLLGALFLLIGCAGFSAFYILQAITLRKYPAEMSLATWVCFIGALQSSAVTIFMERKSPDAWALGLDSRLFASVYAGIVTSAIQFYVQGSVIKTMGPVFVTAFNPLRMIIVTALACIFLSEKLHLGSIVGGVVVVTGLYLVVWGKSKEQKRIMLEEEAPQKISQQGQQQLPITVPKVDVNDNNNKHQLVIVGDQTST 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01110 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Trre2g01110 388 PANTHER WAT1-RELATED PROTEIN 21 347 IPR030184 GO:0016020|GO:0022857
Trre2g01110 388 Pfam EamA-like transporter family 19 160 IPR000620 GO:0016020
Trre2g01110 388 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020
Trre2g01110 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01110 Trre-Chr2 8902741 8905973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01110 9 385 Nodulin-like Gene Family AT2G37460 43.077 2.16e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01110 - - gmx:100813852 588.186