Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01081 ATGGCATCATCTAAAGTCAATAAGAAAGTGTTTGATCCAGAAGAAGCTTTAGCAACGGTTAAGGATCTAAGAACAACGTTTGACTCTGGTAAAACACAAAGCTATGAATGGAGAGTTTCTCAATTGAAAGCACTTTTGGAGTTAACTGAACAGAAGGAGCAAGAGATTGTTAAAGCTCTCTACTCTGACTTATCCAAATCCGAAGCTGAATCATACATCCAAGAGGTCTACTTAGATGAATTCTAA 246 0.3699 MASSKVNKKVFDPEEALATVKDLRTTFDSGKTQSYEWRVSQLKALLELTEQKEQEIVKALYSDLSKSEAESYIQEVYLDEF 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01081 81 PANTHER ALDEHYDE DEHYDROGENASE 17 76 IPR012394 GO:0006081
Trre2g01081 81 SUPERFAMILY ALDH-like 10 77 IPR016161 GO:0016491
Trre2g01081 81 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 77 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01081 Trre-Chr2 8654405 8656870 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01081 11 76 Aldehyde Dehydrogenase Gene Family AT4G34240 46.970 9.74e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01081 K00128 - pvu:PHAVU_001G0727000 90.1225