Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01068 ATGATTCATAACCAATTCATTTTCTTCTTCCTTTTCACCTTTTTCATAGCTTCTCATGGTGCTCCTCCTCCTTCTGAAGCATCATGTCCTATGGATCTTAGCTATGTTGAAACCTTTCCATGGGACACATCAACATGCAGAGATCCAATTGACTCAGAACACTGTTGTCAATCTCTTCTAAGTCTCTTTGGTATAGGACTTGCAAAACATCTCAAAGAAACTTCAATCTTTCAACTTCCAAATGAAAACATTTCCACAAGATGTTTACAAGATTTCAAACTCAACCTTTCATCCTTAAAAATTCAACCATCATTAGTCCCTAGTTGTTTTCAAAACTCAACTCAGTTTGTCACAAACACATCAAGTTGTGCAGGTATAACAAACATGACAGATTGGAAACAAAAAGTTGGTATGTTAAGTCCTTTAGATACTTCTTGTAATGGTGATTTGAGTTCTGAAACTAGTTGCAATATTTGTACTGAAGCTGGTTTTAAAGTCACTGCTCAACTTAGAAGTGCTGTTGTTGGTGTTATTTTAGCTTTTGTGTTGATTGTTATGTATAGAAAATGGAATAAGATGAGGAGAGAAAATCTTTATCATAGATCAGTTGAAAATAGTGTTAGAGATAGTGTTTTGCCTAATACAGGTGCTAAATGGTTTCATATATCAGAACTTGAAAAAGCTACTAATAAGTTTTCACAGAAGAATATGATTGGTCAAGGTGGTGATGGAGTTGTTTACAAAGGAACACTTTCTGATGGAACTTTGGTTGCAGTGAAAGAAATTTTTGATTTAGATACAAGAGGTGATGAAGAGTTTTGTTATGAAGTTGAGATTATAAGCAAAATTAAGCATAGGAATCTTCTTGCTTTAAGAGGATGTTGTGTTACAAGTCACAGTGTTAAAGGAAAAGTTGATGAAATATTTGATGAAGCAGTTAAAGATGAAGGGCCAGAGAAAATTATGGAAAGATTTGTACTAGTTGGAATTCTCTGTGCTCATGCAATGGTTGCATTAAGGCCTACAATTGCAGAAGCACTTAAGATGTTAGAAGGTGATATTGATATTCCTAATTTACCTGATAGATCTGTTCCACTTGGTCATGAATCATTTCAATCTTCACTTTTGCAAGGAAGTGGAAGAACAACACCTTATACTTCATTTTATTCTTCTTCAAATATTAGCACAATTAGTAGAAATTGA 1203 0.3392 MIHNQFIFFFLFTFFIASHGAPPPSEASCPMDLSYVETFPWDTSTCRDPIDSEHCCQSLLSLFGIGLAKHLKETSIFQLPNENISTRCLQDFKLNLSSLKIQPSLVPSCFQNSTQFVTNTSSCAGITNMTDWKQKVGMLSPLDTSCNGDLSSETSCNICTEAGFKVTAQLRSAVVGVILAFVLIVMYRKWNKMRRENLYHRSVENSVRDSVLPNTGAKWFHISELEKATNKFSQKNMIGQGGDGVVYKGTLSDGTLVAVKEIFDLDTRGDEEFCYEVEIISKIKHRNLLALRGCCVTSHSVKGKVDEIFDEAVKDEGPEKIMERFVLVGILCAHAMVALRPTIAEALKMLEGDIDIPNLPDRSVPLGHESFQSSLLQGSGRTTPYTSFYSSSNISTISRN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01068 400 ProSiteProfiles Protein kinase domain profile. 232 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01068 400 FunFam Receptor-like serine/threonine-protein kinase At4g25390 197 307 - -
Trre2g01068 400 Gene3D Phosphorylase Kinase; domain 1 193 301 - -
Trre2g01068 400 PANTHER OS01G0750732 PROTEIN 302 363 - -
Trre2g01068 400 Pfam SPARK 25 172 IPR043891 -
Trre2g01068 400 Pfam Protein tyrosine and serine/threonine kinase 234 299 IPR001245 GO:0004672|GO:0006468
Trre2g01068 400 SUPERFAMILY Protein kinase-like (PK-like) 210 299 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01068 Trre-Chr2 8484993 8486840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01068 303 382 Receptor kinase-like Gene Family AT1G11050 53.488 5.17e-21 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Trre2g01068 SPARK 5.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01068 - - mtr:25482441 486.878