Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01058 ATGTCATTGATTATATCTCCGGAGTTGGCTGATGCATCATACAGGAATGCCAAGCTATACTCGTTAAAGGGAACCGATGTTACACCTGGCTTGTCCTCTCATAATTTTGCTCCGGATAAGCACAGAAGTATGTACATGAATGATTCTTACTCGAGTGAGAGTTATGAAAAATACTTCCTTGATTCACCGACAGAAGAACTGATAGAACCATCTAGTTCTGGTATATCAGGAAATTCGGTTCATGCTGATAGTGATTCTTCTTACCAGCTCAGAGCTAATTCTGGAGGTTCAATGGTCACTGATAATCCATTTGATACTTATGTATCGTCTACAAGGAAACGTGATGCCTATCAGTCAAAATTTGAATCAGATTTGTTTGAAAATGAGAGCCCAGATTGCTTTGAATTTGACGGTGAAATGCGATTGAAACTACAAGAATTGGAGAGGGCATTGCTTGGTGACAATAATGATGATTGCGATGACGATGGGGAAAACATATTTAGGACTGTACAGAGCATGGATATTGATCCTGACTTTGCTGAGTGCGCCAATCCTGCTCAGAACATGTCACTTCACGACTCACCAAAGGAATCTTTGTCATCAGATTCCAATCTTAGTTGCAGCAGCAGCTGCAAAGAAATATCGCAAAAATCTCCTCGGACCCCGAAGCAGTTACTCTATGAATGTGCTAGTGCACTTTCAGAAGGAAATGAAGTAAAAGCCTCAGCTATGATAGACGATCTCAGGCAAATGGTTTCGATTCAGGGAGATCCTTCCACAAGAATTGCAGCCTACATGGTGGAAGGACTTGCAGCTCGTTTGGCTTCATCTGGAAAATCTATTTATAAAGCTTTGAGATGCAAGGAACCTCCTTCTTCCGATCGTCTAGCAGCAATGCAGATACTATTCGAGGTGTGCCCGTGTTTTAAATTTGGATTCATTGCTGCAAATGGTGCTATTGCTGAGGCTATTAAAGATGATAAGAAGGTTCACATAATAGATTTTGATATCAACCAAGGAAGTCAATATATAACCCTAATACAAACACTTGCTTCTAGGCCGGGGAAACCGCCTTTTGTGAGATTGACCGGCGTTGATGATCCTGAATCGGTGCAGCGGTCTGTTGGAGGCCTAAGTATTATAGGACAGAGACTTGAAAAGCTAGCAGAAGTACTCGGATTGCCATTTGAATTCCGTGCCGTAGCGTCAAGTTCTTCAGTTGTTACTCCATCAATGCTCAACTGTCGTCCCGGGGAAGCAATTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCGTGACGAAAGTGTATCAACAGTAAATGAGCGAGACCAGCTTCTTCGAATGGTTAAGAGCCTTAATCCAAAACTTGTAACAGTTGTGGAACAAGACGTAAACACAAACACTTCTCCGTTTCTCCCACGATTTGTTGAAGCCTACAATTACTATTCTGCCGTGTTTGAGTCGCTCGACGCCACTCTTCCGAGAGAGAGTCAGGATAGGGTGAATGTTGAAAGGCAATGCTTGGCAAGGGACATTGTCAATATCATTGCGTGCGAGGGCGAGGATAGAATAGAACGGTATGAGGTTGCCGGAAAATGGAGGGCAAGGATGAAAATGGCTGGATTTACTTCATCACCAATGAGTACAAATGTGGAAGAAGCAATTAAGGAACTCATTAGGCAGTATTGTGACAAGTACAAGATAAATAGAGAAATGGGGGCACTTCATTTTGGATGGGAAGACAAAAACTTGATTGTTGCTTCAGCATGGAAGTGA 1779 0.425 MSLIISPELADASYRNAKLYSLKGTDVTPGLSSHNFAPDKHRSMYMNDSYSSESYEKYFLDSPTEELIEPSSSGISGNSVHADSDSSYQLRANSGGSMVTDNPFDTYVSSTRKRDAYQSKFESDLFENESPDCFEFDGEMRLKLQELERALLGDNNDDCDDDGENIFRTVQSMDIDPDFAECANPAQNMSLHDSPKESLSSDSNLSCSSSCKEISQKSPRTPKQLLYECASALSEGNEVKASAMIDDLRQMVSIQGDPSTRIAAYMVEGLAARLASSGKSIYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAIAEAIKDDKKVHIIDFDINQGSQYITLIQTLASRPGKPPFVRLTGVDDPESVQRSVGGLSIIGQRLEKLAEVLGLPFEFRAVASSSSVVTPSMLNCRPGEAIVVNFAFQLHHMRDESVSTVNERDQLLRMVKSLNPKLVTVVEQDVNTNTSPFLPRFVEAYNYYSAVFESLDATLPRESQDRVNVERQCLARDIVNIIACEGEDRIERYEVAGKWRARMKMAGFTSSPMSTNVEEAIKELIRQYCDKYKINREMGALHFGWEDKNLIVASAWK 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01058 592 ProSiteProfiles GRAS family profile. 213 592 IPR005202 -
Trre2g01058 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 201 587 IPR005202 -
Trre2g01058 592 Pfam GRAS domain family 223 592 IPR005202 -
Trre2g01058 592 MobiDBLite consensus disorder prediction 67 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01058 Trre-Chr2 8404102 8405880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01058 1 592 GRAS Transcription Factor Family AT1G21450 61.398 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre2g01058 GRAS 1.7e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01058 - - gmx:100807048 900.197