Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01056 ATGGTGCCTCCGGGGCAGCCGAATCCGATTGGTGGTGCCCCATCTTTGTCGCCTTCGCTTATGAGAACGAATTCCGGGATGATGGGTGGTCAAGGAGGACAAGCTTCTTTTCCTTCGTTGGTTTCGCAGCGAAATCAGTTTAATAACATGAATATGTTGGGCAATATGTCTAATGTTGCTTCCATGATGAATCAGTCTTTTTCCAATGGGATTCCGAACTCGGGGCTCGGTGGATTGGGAAGTGGTCAGAGGGGTGGTATGGATGCTGGGGCTGAACAGGACCCTTTGTCTGGTGTTGGTAATGGAATGGGATTTGGTAATCCTTCGTCGTCGTTTGGGCAAGCTAATGTTGCTAACCCTGGTTCATCCGGTCAAGGCCAAGGTCAGGGTCAGCAATTTTCAAACCCTTCTGGTAACCAGTTGTTGTCGGATCAACAACATTCACAACAACTTGATGTTCAAAATTTCCAACATAATCAGCAGCAGTCAGCGCAGCAGTTTTCGGCTCCAATGAACACTCAACAACAACAACAGCAACATCATCAGCAGCAGCAACAGCATTTTCAATCAATGCGAGGAGGGATAGGTGGTATTGGACCGGTGAAAATGGAGCCACAGGTAAACAGCGATCAGTTTGGGCAGCAGCAGCAATTATCATCGCTGAGGAGTCTTGCTCAGGTAAAATTAGAACCGCAACAACTTCAATCAATGAGAGGTATGGCTACTGTAAAAATGGAGCCTCAGCATAGCGATCAGCCGTTTTTGCATCAACAGCAACAACAGCAGCAGCAGCAACAACAACAACAACAACAACTCCTCCATATGTCAAGGCAAACCACCCAGGCTACTGCTGCACAGATGAACCTTTTGCAACAACAAAGACTTTTGCAATTTCAACAGCAGCAACATCAGCAACAACTCTTAAAGGCTATGCCTCAGCAGCAACGGTCCCAGATACAGCAGCAGTTTCAACAGCAGAATATGCCTGTAAGGTCTCCCGTGAAACCAGCATATGAACCTGGGATGTGCGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAACATCGATTTCTGGAGGAAATTTGTTGCCGAGTATTTCGCTCCTAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGCAGACAAACAACTGGAGTTTTCCCTCAGGATATATGGCACTGTGAAATATGTAATCGCAAACCGGGCCGTGGGTTTGAGGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAGTATGAAAGTGGTACTTTAGAAGAGCTACTGTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGCCAAATTGTTCTAGATTATGCAAAAGCAATTCAAGAAAGTGTTTTTGAGCAACTTCGCGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAGTTTTGCGCTCGGCGCCATGAAGAACTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGACAAGTTGCTCAAAAATATCAGTCATGTACTCAAAATGCAGCACCCAATCTATCCGTTCCAGAGTTACAAAATAATTGCAATTTGTTTGTTGCATCAGCCCGTCAGCTGGCAAAAGCTTTAGAAGTTCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTGCAGATATCAGAAGTGGTAAATAGTATGAAAGACTTAATAGATTATAGCAGAGAAACAGGGACTGGACCTATGGACAGCTTAGCCAAATTCCCTCGGAGAACAAGTAATTCATCATCTGCGCTTCATAGTCAGGTGCAACAGTCTGAAGATCAATTACAACAGCAACAACAGCATATGGTGGCCCATAACTCAAATGGTGACCAAAACTCTTCACAAAATGCTACCATGCAAATTCCTTCTAACAATGGTGTGGCTAATGTAAATAGCAGTGTCAGCTCAGCACCTGCATCGACCACCACAAGCACCATTGTTGGGCTTCTCCACCAGAACTCAATGAATGCTAGACAGCAAAACTCAATGAATAATGCAAGCAGTCCATATGGAGGTGGTTCAGCGCATATTCCATCCCCGGGTTCTTGTAATACAGTGCCACAAGCACAACCAAACTCGTCCCCTTTTCATTCACCAACACCGTCCTCATCTAACAACCCACAAACTTCTCACCCGGGCATAACATCTGCAAATCACATGAGTACAGCAAACTCGCCGGCTAATATTTCCTTGCAACAACAGCAGACGTCAATTTCTGGTGATGCTGACCCTAGTAACGATGCTCAGAACTCGATGCACAAAATCATTCACGAGATGATGATGTCTTCCCAGATGAACGGAACAGGTGGAATGGTAGGCTCTAATTCTCTCGGAAATGACATGAAGAATGTAAATGGTATCCTACCAGGGAGTACTAATACAGGCCTCAACGGTGGCAATGGCATGATGGTTAATGGAGGCGTGAACAATAATTCTAGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTCCATCTGGTTTACCGAATGGCATGAGGCCTGGAATGGGAAATAATTCAGTCATGAATGGAAGGGGTGGAATGGCGTCTATGGCTCGCGAACAGGCAATGAATCATCAACAGGATTTGTCAAGCCAACTACTTAGTGGATTAGGAGCAGTAAATGGTTTTAATAATCTTCAATTTGATTAG 2745 0.4477 MVPPGQPNPIGGAPSLSPSLMRTNSGMMGGQGGQASFPSLVSQRNQFNNMNMLGNMSNVASMMNQSFSNGIPNSGLGGLGSGQRGGMDAGAEQDPLSGVGNGMGFGNPSSSFGQANVANPGSSGQGQGQGQQFSNPSGNQLLSDQQHSQQLDVQNFQHNQQQSAQQFSAPMNTQQQQQQHHQQQQQHFQSMRGGIGGIGPVKMEPQVNSDQFGQQQQLSSLRSLAQVKLEPQQLQSMRGMATVKMEPQHSDQPFLHQQQQQQQQQQQQQQQLLHMSRQTTQATAAQMNLLQQQRLLQFQQQQHQQQLLKAMPQQQRSQIQQQFQQQNMPVRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDIWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGQVAQKYQSCTQNAAPNLSVPELQNNCNLFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSNSSSALHSQVQQSEDQLQQQQQHMVAHNSNGDQNSSQNATMQIPSNNGVANVNSSVSSAPASTTTSTIVGLLHQNSMNARQQNSMNNASSPYGGGSAHIPSPGSCNTVPQAQPNSSPFHSPTPSSSNNPQTSHPGITSANHMSTANSPANISLQQQQTSISGDADPSNDAQNSMHKIIHEMMMSSQMNGTGGMVGSNSLGNDMKNVNGILPGSTNTGLNGGNGMMVNGGVNNNSSVGVGGYGTMGLGPSGLPNGMRPGMGNNSVMNGRGGMASMAREQAMNHQQDLSSQLLSGLGAVNGFNNLQFD 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01056 914 MobiDBLite consensus disorder prediction 17 36 - -
Trre2g01056 914 MobiDBLite consensus disorder prediction 593 669 - -
Trre2g01056 914 MobiDBLite consensus disorder prediction 103 191 - -
Trre2g01056 914 MobiDBLite consensus disorder prediction 73 219 - -
Trre2g01056 914 MobiDBLite consensus disorder prediction 690 753 - -
Trre2g01056 914 Coils Coil 618 638 - -
Trre2g01056 914 MobiDBLite consensus disorder prediction 603 669 - -
Trre2g01056 914 MobiDBLite consensus disorder prediction 251 274 - -
Trre2g01056 914 MobiDBLite consensus disorder prediction 245 274 - -
Trre2g01056 914 MobiDBLite consensus disorder prediction 1 36 - -
Trre2g01056 914 PANTHER LIM DOMAIN-BINDING PROTEIN 213 908 IPR029005 -
Trre2g01056 914 Pfam LIM-domain binding protein 346 600 IPR029005 -
Trre2g01056 914 MobiDBLite consensus disorder prediction 760 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01056 Trre-Chr2 8379166 8385296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01056 1 914 C2H2 Transcription Factor Family AT1G43850 56.172 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01056 - - gmx:100798031 1197.96