Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01041 ATGAAAAACAAAATGGCCCTTTTGTTCTTCTATTCAACAACTTTCATGATTGGAACAATGTTCTTATTTTCTGTTGAAGCTGAACCAATAGCAGATAAACAAGCTTTACTTGATTTCCTTCACAAAATGAACCATTCCACACATCTCAATTGGAACAAAAATTCTTCTGTATGTCGAAAATGGACACGAGTTATCTGCAACAAAGAACAATCAAGAGTTATATCTCTTCAGCTACAAAATGTTGGATTGAATGGTTCAATTCCACCCAACACTCTTAGTAAACTCTCAGGACTACAAAATTTGAGTCTTGCATCAAATACTATAACTGGTTTTTTTCCTTCTGGTTTCAATAAGCTAAAAAATTTAACCTCTATCTTTCTCCAATCCAACAAGTTTTCTGGTTCATTGCCATTAGATTTTTCAGTTTGGAAGAATCTAACTTTTATTGATTTTTCTAACAATGGTTTTAATGGTAGCATACCTTTATCAGTTTCAAATTTGACTCATCTTAGTTCTTTGATTCTAGCTAATAACACTCTTTCAGGTGAAATTCCTGATATTAATATTCCTAGTCTCAAAGATCTCAATTTGGAAAACAATAATCTTAGTGGTTTTGTTCCTAAATCACTTTCTAGATTTCCTAGTTTGTCATTTTCAGGTAACAATCTTACATATGTAAATGTTTATTATCCTCCAAATGTTCTTAAAAAAAGGACAAAAAACAAAGGACTTAAGGAACCAGAATTATTAGGTATCATCATTGGTGGTTCTATGTTAGGACTTTTAGTCATAGGAGTTTTCTTGATTGTGTGTTTATATGAGAAACGCGGCGAAGATGGAAAAATTATTAAGTCTCAGAAGAGCAAAGAAGTTTTTTCGGAGAAAAAAGAAGCTTCGGAGAGTCTAGAACGAAACAAAATCGTCTTCTTTGAAGGTTGTAATCTGGTATTTGACTTGGAAGATTTGTTGAGAGCTTCTGCTGAGGTTCTTGGGAAAGGAACATTTGGTACTGTTTATAAGGCTGCTTTAGAGGATGCAACAACGGTCGCGGTTAAGAGGTTAAAGGAGGTTACGGTTGGGAAGCGCGAGTTCGAACAACAGATGGAGATTGTAGGGAGGATTAGGCATGATAATGTGGTTGCATTAAGAGCTTATTACTATTCAAAGGAAGAGAAACTTATGGTTTATGATTATTATGAACAAGGCAGTGTCTCATCAATGTTGCATGGCAAAAGAGGGGCAGAGAGGATTCCTTTAGATTGGGAAAGTAGGTTGAAAATAGCAATTGGTGTAGCAAGAGGCATTGCTCACATCCATGAAGAAAAACTAATCCATGGAAACATTAAAGCTTCAAACATCTTCCTCAACTCAAAAGGATATGGTTGTATATCTGACATTGGTCTAGCAACAATGATAATAAGTCCAATATCACCAAGAGCAAGAGGATACCTTGCGTCGGAAGTAACCGAAACTCGAAAAGCAACGTCTGCATCCGATGTCTATAGTTTCGGTGTATTGTTACTTGAACTTTTAACTGGAAAATCTCCCTTACATGGAGGTGAGGAAGTTGTTCATTTGGTTAGATGGGTGAATTCTGTGGTTAGAGAAGAATGGACTTCTGAAGTGTTTGATTTGGAGTTATTGAGATATCCTAATATAGAAGAAGAAATGGTTGAGATGTTACAAATTGGTATGGCTTGTGTTGTAAGGTTACAAGATGATAGACCAAAAATGGATGAAGTTGTGAGAATGGTTGAGGAAATTCATAGGGCTAATAGTGGAAATAGACCTTCATCTGAATCTAGATCAGAATGTTCTACTCCAACTCCTCATGTGATTGAGACACCAACTTCTCTTGCAGATTGA 1866 0.3564 MKNKMALLFFYSTTFMIGTMFLFSVEAEPIADKQALLDFLHKMNHSTHLNWNKNSSVCRKWTRVICNKEQSRVISLQLQNVGLNGSIPPNTLSKLSGLQNLSLASNTITGFFPSGFNKLKNLTSIFLQSNKFSGSLPLDFSVWKNLTFIDFSNNGFNGSIPLSVSNLTHLSSLILANNTLSGEIPDINIPSLKDLNLENNNLSGFVPKSLSRFPSLSFSGNNLTYVNVYYPPNVLKKRTKNKGLKEPELLGIIIGGSMLGLLVIGVFLIVCLYEKRGEDGKIIKSQKSKEVFSEKKEASESLERNKIVFFEGCNLVFDLEDLLRASAEVLGKGTFGTVYKAALEDATTVAVKRLKEVTVGKREFEQQMEIVGRIRHDNVVALRAYYYSKEEKLMVYDYYEQGSVSSMLHGKRGAERIPLDWESRLKIAIGVARGIAHIHEEKLIHGNIKASNIFLNSKGYGCISDIGLATMIISPISPRARGYLASEVTETRKATSASDVYSFGVLLLELLTGKSPLHGGEEVVHLVRWVNSVVREEWTSEVFDLELLRYPNIEEEMVEMLQIGMACVVRLQDDRPKMDEVVRMVEEIHRANSGNRPSSESRSECSTPTPHVIETPTSLAD 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01041 621 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 399 599 - -
Trre2g01041 621 FunFam Probable inactive receptor kinase RLK902 29 188 - -
Trre2g01041 621 Pfam Protein tyrosine and serine/threonine kinase 328 583 IPR001245 GO:0004672|GO:0006468
Trre2g01041 621 FunFam pollen receptor-like kinase 1 293 398 - -
Trre2g01041 621 ProSiteProfiles Protein kinase domain profile. 324 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01041 621 Gene3D Transferase(Phosphotransferase) domain 1 399 607 - -
Trre2g01041 621 ProSitePatterns Protein kinases ATP-binding region signature. 330 361 IPR017441 GO:0005524
Trre2g01041 621 PANTHER OS05G0588300 PROTEIN 17 600 - -
Trre2g01041 621 MobiDBLite consensus disorder prediction 592 621 - -
Trre2g01041 621 SUPERFAMILY Protein kinase-like (PK-like) 328 589 IPR011009 -
Trre2g01041 621 Pfam Leucine rich repeat 75 132 IPR001611 GO:0005515
Trre2g01041 621 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Trre2g01041 621 SUPERFAMILY L domain-like 46 226 - -
Trre2g01041 621 MobiDBLite consensus disorder prediction 589 621 - -
Trre2g01041 621 Gene3D Ribonuclease Inhibitor 30 245 IPR032675 -
Trre2g01041 621 Gene3D Phosphorylase Kinase; domain 1 288 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01041 Trre-Chr2 8288050 8290382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01041 6 609 Receptor kinase-like Gene Family AT4G23740 54.803 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre2g01041 PK_Tyr_Ser-Thr 8.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01041 - - aprc:113851984 840.106