Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g01039 | ATGGCATTAGAAGTCCTTGAGGCTCTTGATTCAGCTCGAACACAATGGTACCATGTAACAGCAATAGTAATTGCAGGCATGGGATTCTTCACTGATGCTTATGATCTCTTTTGCATTACAACCGTTTCAAAGCTATTAGGACGGTTATATTACTTCGATCCAAGCAATGGCAAACCGGGGAAGCTCCCACCAATAGTTAACAACTTTGTCACCGGTGTGGCCCTTGTCGGAACACTTTGCGGCCAATTATTTTTTGGCTACCTTGGAGACAAACTAGGGCGCAAAAAAGTCTATGGCATCACACTCATTCTCATGGTCGCTTGTGCCCTTTGCTCCGGCCTTTCCTTTGGTTCATCACCAAAATCCGTTATGACAACCCTTTGTTTTTTCAGGTTCTTTCTTGGATTTGGTATTGGTGGAGACTACCCTTTATCTGCAACTATCATGTCAGAATACGCCAACAAAAGGACACGTGGCGCATTCATAGCAGCTGTTTTCGCGATGCAAGGTGTGGGAATTATCTTCGCTGGGTTGGTTTCTATGGTTTTATCAGCTGTTTTCAAAGCATATTACGATGCTCCAAGTTTCTCTAAAGACCCAATTTTGTCAACACAACCCGAAGGTGATTTATTGTGGCGATTAGTTCTCATGATTGGTGCTGTTCCGGCTCTTATGACTTACTATTGGCGAATGAAAATGCCTGAAACTGGTCGTTATACTGCAATCGTAGAAGGAAACGCGAAACAAGCTGCAGCAGACATGGCAAGAGTTTTAGATATTGAAATTATAGCGGAGCAAGATAAGTTGGCTGAGTTCAAAGCCGCGAATAATTACTCTCTTTGGTCGCGCGAGTTTTTTGACAGACATGGTCGTCATTTGATTGGTACGATGAGTTGTTGGTTCTTATTAGATATTGCATTCTACAGTCAGAACTTAACACAAAAAGATATTTACCCTGCAATGGGACTAATTGATAAAGATGTTGCCATGAATGCTATTAATGAAGTTTTCCAAACTTCGCGTGCCATGTTTATTGTCGCCTTGTTTGGAACTTTCCCCGGTTATTGGTTCACCGTTTTCTTCATTGAAAAAATGGGACGACACAAGATCCAACTCATTGGTTTCTTCATGATGTCTTTGTTCATGTTTATTATTGGTGTCAAATATGATTACTTGAGAGACGAAAACAAGAACCTATTCGCTCTTTTATACGGGCTAACATTCTTTTTCGCGAACTTTGGGCCTAATAGTACTACATTTGTCTTGCCGGCTGAGCTGTTTCCAACGCGGGTGAGGTCTACCTGTCATGCTCTCAGCGCGGCGGCAGGGAAGGCTGGGGCTATGGTCAGTGCATTTGGGATACAGTACTACACAATTGACGGTGAGACACCGAAGATTAAAAAGGCAATGATAATTTTGGCCTTCACTAATTTGTTAGGATTCTTCTGCTCGTTCTTGGTCACCGAAACTAAGGGACGATCTTTGGAAGAGATTTCGGGTGAGGATGGGAGAGAAAGTGAACTCACTGCAACACCAAATGATAGGGTTACTGGGACTCATCAAGAATCAAGAACAGAGAAGATGTAA | 1587 | 0.4253 | MALEVLEALDSARTQWYHVTAIVIAGMGFFTDAYDLFCITTVSKLLGRLYYFDPSNGKPGKLPPIVNNFVTGVALVGTLCGQLFFGYLGDKLGRKKVYGITLILMVACALCSGLSFGSSPKSVMTTLCFFRFFLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFAGLVSMVLSAVFKAYYDAPSFSKDPILSTQPEGDLLWRLVLMIGAVPALMTYYWRMKMPETGRYTAIVEGNAKQAAADMARVLDIEIIAEQDKLAEFKAANNYSLWSREFFDRHGRHLIGTMSCWFLLDIAFYSQNLTQKDIYPAMGLIDKDVAMNAINEVFQTSRAMFIVALFGTFPGYWFTVFFIEKMGRHKIQLIGFFMMSLFMFIIGVKYDYLRDENKNLFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGAMVSAFGIQYYTIDGETPKIKKAMIILAFTNLLGFFCSFLVTETKGRSLEEISGEDGRESELTATPNDRVTGTHQESRTEKM | 528 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g01039 | 528 | ProSitePatterns | Sugar transport proteins signature 2. | 133 | 158 | IPR005829 | GO:0016020|GO:0022857|GO:0055085 | |
Trre2g01039 | 528 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 21 | 492 | IPR020846 | GO:0022857 | |
Trre2g01039 | 528 | FunFam | Inorganic phosphate transporter 1-6 | 17 | 512 | - | - | |
Trre2g01039 | 528 | MobiDBLite | consensus disorder prediction | 496 | 528 | - | - | |
Trre2g01039 | 528 | SUPERFAMILY | MFS general substrate transporter | 8 | 499 | IPR036259 | - | |
Trre2g01039 | 528 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 18 | 496 | - | - | |
Trre2g01039 | 528 | CDD | MFS_PhT | 22 | 491 | - | - | |
Trre2g01039 | 528 | NCBIfam | phosphate:H+ symporter | 6 | 501 | IPR004738 | GO:0005315|GO:0006817|GO:0016020 | |
Trre2g01039 | 528 | Gene3D | MFS general substrate transporter like domains | 17 | 515 | IPR036259 | - | |
Trre2g01039 | 528 | Pfam | Sugar (and other) transporter | 22 | 499 | IPR005828 | GO:0016020|GO:0022857|GO:0055085 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g01039 | Trre-Chr2 | 8271677 | 8273629 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g01039 | 3 | 501 | Inorganic Solute Cotransporters | AT5G43350 | 61.252 | 0.0 | 639 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g01039 | K08176 | - | gmx:100805284 | 890.567 |