Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01015 ATGAAGGACACGAAACGACATTCGTCGGAATCTACTCTCCGACGAGTGGATTCTGTTGAGGCAGTTACGAAATTGGAGAATGTTCACCGGAGGAGGTTGAAAATTCGGAGAATGAAGTATAGTTGTCAAGCGAAGATCCACGTCGGAAATAACTCCGACGGCTGTACAGTGACGGAGAATGAGCGACCAGAGATTCATGAATCGGTTGAGATATCACTGTCTTTAGCAACTTCTTCTTCATCATCGGAGGAAGAAGATCGGACCTCGAAGCGAAATGGATCAGAAGTTCTATCGTACGGTACGGTGTCGACGATAGGGACGAGGAAGGAGATGGAAGATGCAGTGAGTGTGGAAATAGGTTTTGCGGTTAAGGATAATGAGAAGTGTGATTTCTTCGGTGTTTATGACGGTCACGGCGGAGTACAGGTGGCGGAGGCGTGTAAGGAGAGGTTGCATCGGGTTGTGGCTGAGGAAGTGGAGAGGTGTGGAAAGGATGAGGAATGGGATTGGGAAAGAGTGATGGAAGGGTGTTTTGGTAAAATGGACAGAGAACTGGCGGGTGATGCAGCCGTTAGGACTGTGGGGTCCACGGCTGTCGTAGCTGTTGTTGCTAAGGCTGATATTGTCGTTGCAAATTGTGGTGATTCTAGAGCGGTTATGGGAAGAGCCGGCGAAACTATGGACTTGTCTACTGATCATAAACCAAACAGGCCAGATGAGTTGATGCGAATAGAAGAAGCTGGTGGAAGGGTCATAAACTGGAATGGCCACCGTGTTCTTGGTGTTCTTGCCACTTCACGATCTATAGGAGATCAATATCTTCGACCATATGTAATATCGAAACCTGAAGTCACTGTGACAAAGCGAACCAACGACGATGAATTTCTCATACTAGCAAGTGATGGCTTATGGGGTGTAATGTCAAGTGAAATTGCTTGCCAAATTGTAAGAAAATGCTTCAAAGGCCAAATTAGGAGAGTTTGTCATGGGGTTGGGAATCAAAGTAGTCGTGCTGCTGAAGCTGCAACACTATTATCTGAGATAGCATTGGCAAAGGGTAGCAGAGACAATACAAGTGTCATAGTAGTTGACCTAAGGAACATTAACATCTAG 1113 0.4618 MKDTKRHSSESTLRRVDSVEAVTKLENVHRRRLKIRRMKYSCQAKIHVGNNSDGCTVTENERPEIHESVEISLSLATSSSSSEEEDRTSKRNGSEVLSYGTVSTIGTRKEMEDAVSVEIGFAVKDNEKCDFFGVYDGHGGVQVAEACKERLHRVVAEEVERCGKDEEWDWERVMEGCFGKMDRELAGDAAVRTVGSTAVVAVVAKADIVVANCGDSRAVMGRAGETMDLSTDHKPNRPDELMRIEEAGGRVINWNGHRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTNDDEFLILASDGLWGVMSSEIACQIVRKCFKGQIRRVCHGVGNQSSRAAEAATLLSEIALAKGSRDNTSVIVVDLRNINI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01015 370 Gene3D - 92 368 IPR036457 -
Trre2g01015 370 ProSiteProfiles PPM-type phosphatase domain profile. 98 365 IPR001932 -
Trre2g01015 370 PANTHER PROTEIN PHOSPHATASE 83 365 IPR015655 GO:0004722|GO:0006470
Trre2g01015 370 CDD PP2Cc 98 365 IPR001932 -
Trre2g01015 370 ProSitePatterns PPM-type phosphatase domain signature. 131 139 IPR000222 GO:0043169
Trre2g01015 370 Pfam Protein phosphatase 2C 100 358 IPR001932 -
Trre2g01015 370 SUPERFAMILY PP2C-like 94 367 IPR036457 -
Trre2g01015 370 SMART PP2C_4 88 363 IPR001932 -
Trre2g01015 370 FunFam Protein phosphatase 2C 51 91 369 - -
Trre2g01015 370 MobiDBLite consensus disorder prediction 73 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01015 Trre-Chr2 7984639 7988308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01015 74 366 PP2C-type Phosphatase Gene Family AT2G29380 50.318 2.40e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01015 K14497 - gmx:100807235 475.322