Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g01014 | ATGAACACTGCTTTACAATCTCATTATTCTCCCATTAAATGTCTTTCTTCTCATGGATACCAAGTTTATGCTTTGAATTCTACACTTAAAATTAAGGATGTTACATTGACATATTGTACAAAGTTGTATGATATGTCTTTTGTTCCAAAAGATGTTGTGTTTAGCAATGGAGTTGATCTTGTTTTAGGATGGGATACAAGTTGTAGCAATGGAAGTAAAACAGAACATGATTGTTACAACATTGTCAACGAATCTAATGGTGGAAGGAAAAAAGAGCAGATTCAAGTCACTATATTATATCATGTTCGATATCGAACTCGAAAAGAAGAAAATGAAGCAAGAATAGAGAAGTTCTTAGAAGATTATAGAGCATTAAAACCTACAAGGTATTCCTATTCAGACATAAAAAGGATCACAAACAATTTCAAGAATGAACTTGGACAAGGCGCATACGGAACGGTGTACAAAGGTAAACTATCTGGCGACATATATGTTGCAGTCAAACTTCTCAAAACTTCGACAGGAAATGGACCTGAGTTCATCAACGAAGTAGGAACAATGAGTCAAATTCATCATGTCAATGTTGTTCACTTAGTAGGCTTTTGCGCTGATGGACACACACGAGCTTTAGTTTACGAGTATTTACAAAATGGTTCGTTGCAGAAATTCATTTCCACAACGGATTTCAAAAACCATTTTTTGAGTTGGGAGAAGTTACAAGAAATTGCGCTTGGAATAGCCAAAGGGATTGAGTATCTTCACCAAGGATGTGACCAAAGGATACTTCACTTCGATATAAAACCGCACAATATCTTACTTGACAATAACTTCACTCCTAAGATATCTGATTTTGGTTTGGCTAAGCTTTGTTCTAAGGATAAGAGTGCGGTTTCCATGACTGCGGCTAGAGGGACTATTGGTTATATAGCACCGGAAGTTTTTTCTAGGAATTTTGGGAATGTATCGTATAAATCTGATGTGTATAGTTTTGGAATGTTGTTGCTTGAAATGGTTGGGGGAAGGCAAAACGTCGATGTTGTAGAAAAGAAAAGTGGTTTAGGGTATTTTCCGGAATGGATTTATAATTTGTTAGAACAAGGGGATGATTTGAGCGAGCATATTGAGGTGGAGAAATACGCGAAAATAGCGAAGAAACTTGCGATTGTGGGACTTTGGTGTATTCAATGGCACCCAGTCGATCGTCCTTCAATGCAAGTTGTTGTTCATATGTTGGAAGGAGATGGAGAAAAGTTAAGTATGCCACCTAATCCCTTTGCTTCTGCTGATCCTGCTATAATGAATGTGAGTTTAATTGGAAGGCACCTTCATAGAGAGTGA | 1338 | 0.3707 | MNTALQSHYSPIKCLSSHGYQVYALNSTLKIKDVTLTYCTKLYDMSFVPKDVVFSNGVDLVLGWDTSCSNGSKTEHDCYNIVNESNGGRKKEQIQVTILYHVRYRTRKEENEARIEKFLEDYRALKPTRYSYSDIKRITNNFKNELGQGAYGTVYKGKLSGDIYVAVKLLKTSTGNGPEFINEVGTMSQIHHVNVVHLVGFCADGHTRALVYEYLQNGSLQKFISTTDFKNHFLSWEKLQEIALGIAKGIEYLHQGCDQRILHFDIKPHNILLDNNFTPKISDFGLAKLCSKDKSAVSMTAARGTIGYIAPEVFSRNFGNVSYKSDVYSFGMLLLEMVGGRQNVDVVEKKSGLGYFPEWIYNLLEQGDDLSEHIEVEKYAKIAKKLAIVGLWCIQWHPVDRPSMQVVVHMLEGDGEKLSMPPNPFASADPAIMNVSLIGRHLHRE | 445 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g01014 | 445 | FunFam | PR5-like receptor kinase | 215 | 422 | - | - | |
Trre2g01014 | 445 | Gene3D | Phosphorylase Kinase; domain 1 | 113 | 214 | - | - | |
Trre2g01014 | 445 | Pfam | Protein tyrosine and serine/threonine kinase | 142 | 411 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g01014 | 445 | ProSitePatterns | Protein kinases ATP-binding region signature. | 146 | 168 | IPR017441 | GO:0005524 | |
Trre2g01014 | 445 | FunFam | serine/threonine-protein kinase PBS1-like | 106 | 214 | - | - | |
Trre2g01014 | 445 | SUPERFAMILY | Protein kinase-like (PK-like) | 123 | 412 | IPR011009 | - | |
Trre2g01014 | 445 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 261 | 273 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g01014 | 445 | ProSiteProfiles | Protein kinase domain profile. | 140 | 426 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g01014 | 445 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 111 | 426 | IPR045874 | GO:0004672 | |
Trre2g01014 | 445 | Gene3D | Transferase(Phosphotransferase) domain 1 | 215 | 420 | - | - | |
Trre2g01014 | 445 | SMART | serkin_6 | 140 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g01014 | Trre-Chr2 | 7972705 | 7975179 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g01014 | 96 | 431 | Receptor kinase-like Gene Family | AT1G66910 | 50.000 | 2.18e-112 | 343 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Trre2g01014 | PK_Tyr_Ser-Thr | 2.5e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g01014 | - | - | qsu:112017070 | 562.377 |