Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01009 ATGGTTTCAGCCTCTATTTCTGGAGGAAAAACCAGATGTTGCTATTGCTATTGCTATACAAAATGTGTAATAATGTTGCTTTACTTGTTTCTACTTCCACAGCAAACTTATCCCCACTCCCAACCTTGTTTTTCTTCGTGTGGGAAAATTTCAATCATAACCCATCCATTTCGGCTAAAACACGACCCAACCCACTGTGGCGACAATAATTACGAGTTGGATTGCGTGAACAACGTTACGGTATTGAAGTTGTTTCAAGCTGAATATTTAGTAGAATCAATCAATTACAACAATTACACAATTCGAGTTGTTGATCCTAACATTCAACCCACCAATTGCTCCTCTCTCCCCCGGTTCTTCTTATACCGCCACAATTTCACTTATTATAATCCATACCTGTTCAACGAGTTCTTTTACTATAAAAATAATTCATACCAGTACACCTTAAATCGATCGACTTCCATGTATGATGATTACAATGTATTTGATTTTGATTTATCTAGGCCTGTAATATACATGAAGTGTACAAGTCCACCGAGTAAGGTTGTGGAAAGATATTATGCGGATACTGCATCATGCTTGGATCAACACACATACGTTCTTGTTGGGGACCCACAGTTTGGAATACTGGAGCCTCAGTGCCGTGTTAAGCATGTTACTCTCACATCCTTGTGGCCTAGTCGACCTACTTACGGTCCACAGAATATTAAAGGTAATCTTTCCTACATTGATATTCACAAGGGATTACGCTATGGATTTGAAATTTCGTGGATGCAAGTGGTCTGTCATTGTGATGAATGCTATCTCAATGACACCATCGGCGATATTCAATGCTACATACCCTTCTGTCCTTTTGACTCTTGTGGATATTGGTCAAAGAAGGCCCGCCTTTTGTATGATTTTGTTGGTGGCATTTATGACGGACTTCGGGAGCTGACAGGCATGGGTAAGTTAGGACTTCAGCATCTGTTAGGCGGTGATAAGCCAATATATAAGTCAAGTATTTACCTATACAAAGCGGGAATAGTTATAGGAAGATATGTTTTACCATACCTTGCATCTAGAGTCATATTTGGTATCATACTTTTCTCTATGCTGTTGATCTATACGTATCGAAGAAGACATGCATCGATATATGAAAACATTGAAGATTTTCTGCAAGGCAATACTCTTATGCCAATAAGATATTCATACAAAGAGATAAAACAGATGACAAAAGGTTTCAAGGTGAAATTAGGTGAAGGAGGCTATGGAGATGTGTATAGAGGAAATCTAATAAGTGGACCATTTGTAGCTATAAAGATGTTGAAGATAAAATCAAATGCTAATGGGCAAGAATTCATAAGTGAAGTTGCAACTATAGGAAGCATATACCATTCAAATGTTGTAAGACTCGTTGGGTTTTGTGTCGAAGGATCAAAGCGTGCTCTTGTTTATGAATACATGCCTAATAGCTCTCTTGATAAATATATTTTCAACAAAGATGGTGTTGTATCTTTAACTTACAACCAGATATATGAGATATCTCTCGGAGTAGCTCGTGGAATTTCTTATCTTCATCAAGGTTGTGATATGCAAATTTTACATTTTGATATTAAGCCTCATAATATCCTTCTTGATGAAAATTTCATCCCTAAAGTTTCGGATTTTGGTCTTGCAAAGCTTTATCCTATTGACAATAGCATTGTCACTTTGACGGCAGCTAGAGGAACAATTGGATACATGGCTCCTGAATTGTTCTACTATAATATCGGAGGAATATCATATAAGGCTGATGTTTATAGCTTTGGAATGCTTTTGATTGAAATGGCAAGTAGGAGAAGAAATTTGAATTCACATGCTGAGCATTCAAGTCAACTTTACTTTCCTTTTTGGATTTATGATCATTTGGTTGAAAACAGGGTGAAAGAAATGGAAGATGTTATCATGGAAGAAGTTAATGATGTTTTGAAGAAAATGTTCCTAGTTGCACTTTGGTGTATACAGTTGAAACCCATTGATCGTCCTTCAATGAACAAAGTAGTGGAGATGCTTGAAGGAGACATCGGAAATATTGAAATGCCTCCAAAACCTTTACTATATCCGCATGAAACAATTCAAGAGAAATTTGATATCAACTCAAATGAAACTGTATTTGATACATGTTCTACCAGTTATGTGGAGGAAATTGCAACCAATCCTTTATTGAAGTATTCAGCTTGA 2202 0.3678 MVSASISGGKTRCCYCYCYTKCVIMLLYLFLLPQQTYPHSQPCFSSCGKISIITHPFRLKHDPTHCGDNNYELDCVNNVTVLKLFQAEYLVESINYNNYTIRVVDPNIQPTNCSSLPRFFLYRHNFTYYNPYLFNEFFYYKNNSYQYTLNRSTSMYDDYNVFDFDLSRPVIYMKCTSPPSKVVERYYADTASCLDQHTYVLVGDPQFGILEPQCRVKHVTLTSLWPSRPTYGPQNIKGNLSYIDIHKGLRYGFEISWMQVVCHCDECYLNDTIGDIQCYIPFCPFDSCGYWSKKARLLYDFVGGIYDGLRELTGMGKLGLQHLLGGDKPIYKSSIYLYKAGIVIGRYVLPYLASRVIFGIILFSMLLIYTYRRRHASIYENIEDFLQGNTLMPIRYSYKEIKQMTKGFKVKLGEGGYGDVYRGNLISGPFVAIKMLKIKSNANGQEFISEVATIGSIYHSNVVRLVGFCVEGSKRALVYEYMPNSSLDKYIFNKDGVVSLTYNQIYEISLGVARGISYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDNSIVTLTAARGTIGYMAPELFYYNIGGISYKADVYSFGMLLIEMASRRRNLNSHAEHSSQLYFPFWIYDHLVENRVKEMEDVIMEEVNDVLKKMFLVALWCIQLKPIDRPSMNKVVEMLEGDIGNIEMPPKPLLYPHETIQEKFDINSNETVFDTCSTSYVEEIATNPLLKYSA 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01009 733 FunFam PR5-like receptor kinase 482 689 - -
Trre2g01009 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Trre2g01009 733 Gene3D Phosphorylase Kinase; domain 1 383 481 - -
Trre2g01009 733 PANTHER RUST RESISTANCE KINASE LR10-RELATED 379 699 IPR045874 GO:0004672
Trre2g01009 733 Gene3D Transferase(Phosphotransferase) domain 1 482 685 - -
Trre2g01009 733 ProSitePatterns Protein kinases ATP-binding region signature. 412 434 IPR017441 GO:0005524
Trre2g01009 733 ProSiteProfiles Protein kinase domain profile. 406 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01009 733 Pfam Wall-associated receptor kinase galacturonan-binding 43 105 IPR025287 GO:0030247
Trre2g01009 733 FunFam serine/threonine-protein kinase PBS1-like 376 481 - -
Trre2g01009 733 SUPERFAMILY Protein kinase-like (PK-like) 391 679 IPR011009 -
Trre2g01009 733 Pfam Protein kinase domain 410 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01009 733 SMART serkin_6 406 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01009 Trre-Chr2 7928154 7932174 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01009 353 701 Receptor kinase-like Gene Family AT1G66910 46.260 4.33e-99 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trre2g01009 Pkinase 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01009 - - cam:101508554 1036.56