Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00991 ATGAAACAGAACACAAAGCTCACACAACTATGCCAAATTTTAGTGGTAACAATATCAATATCCATGGTAACAATAGTATATTCATCAAATGAATCCTTTTCAACATCCCTACCCGGTTGCAAAAGCACATGTGGAAATATCACAATTCCATATCCATTTGGTATACCAAATTCATCAAAACCAAATCAAGAAACTTGTTTCCTATCGAGAAAATTTAATGTCACGTGTGTAAATGACACAAAATTACTTTGGGGCAATGTACAAGTTAACAACATAAGCATCCCCGAAGGACAAATGGAAGTGTCATTTTCTATCTCCAGTTATTGTGATAACGTAACATGGATTAAACCCTCTTTAGACACTGCCAGTTTTAGAATATCCAGCAAAGAAAACAAGTTTGTAACGGTTGGCTGTGACAGTTACGGTTATCTCAACAGCGTTTTCAACAAAAAAACATATTCGACCGGTTGCTTAACAAGATGTTATGGTAATCGAGACGGAATTGAAAACGGAACATGTTCGGGTATCGGTTGTTGTCAAGTTGATATTCCACATATGATGAGGAATATAAGTGTTAAAGTTTCTGAATTTCCTGACTCCACGGAAAATACTGGGTGTAGCTCTTCTTTTATTGTTAAAAATGGTTTCTATAATTTTTCTCTTTCTCATTTGGATAATTTTCCTTCTAAGAAGCTTCCATTGATTCTTGATTGGAGTATTGGAAGTGAAAATTGTACGGTTTCAAATGCTTGCAAGAATAATAGTGAGTGCATTGATTTGGAAATTGATTCTGGTGGTTACCGGTGTAAATGTAAGGATCGTTATACAGGAAACCCGTATCATCCAGATGGCTGCACAGACATTGATGAATGTAAGACAAATAATACATGCATAACTAAAGAGAATTGTCACAATTTGGAAGGGAGTTATCAATGTATTTGTCCAGATAGGCAACCAGAAAATGCAACATTTGCAGGAGGGTGTAAAGATCATAGACAATTAGATCTTGTTACCAAGATTTCGATTGGAACAAGTGCTGGACTCATTGTCCTATTTGTGGCAATTTCATCTCTATATTTAACATGCCAAAAAAGGAAACTCATCAAACTAAAGCAAAAATTCTTTCAACAAAATGGAGGTTCTATTTTGCTACAACAATTATCTACAGGAGAAGACTCATCGCAATCGGCTCATATATTCACGGAAGAGGAACTTAAAAAAGCCACCAAAAACTATGATGAAAGCTTAATCATTGGTAGAGGAGGTTTTGGCACAGTCTTCAAAGGAATTTTACCCGGCAACAAGATCGTTGCTGTAAAAAAATCCAAAATAATAGACGCAAGTCAAATTGAGCAATTCATTAACGAGGTGGTTGTTCTATCCCAAATAAATCATAGGAACGTCGTAAAACTCTTAGGATGTTGTTTAGAAACAGAAGTTCCTTCCTTGGTTTACGAATTCGTTAGCCACGGTACACTTTTCGACTTCATACAAAGTACTAAAGACGAAGCAAATAATCCAACATGGAAAACACGTTTAAGGATAGCAGCAGAGACAGCCGGAGCTTTGTCGTATCTACATTCGGCTGCTGCAATACCAATTATTCATAGAGATGTTAAGAGCACCAACATTCTCTTGGATGAAAATTACACTGCAAAAGTTTCCGATTTCGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAGATAGCAACAATGGTGCAAGGAACTCTCGGATACTTAGATCCAGAGTATATGCAAACACATCAATTAACTGAGAAAAGTGATGTTTATAGCTTTGGCGTAGTTCTTGCAGAGCTTTTAACAGGGGACAAACCTCTTTCTTTTAATAGGCCGGAAGAGAGCATTAGTCTTGCTATGCACTTTTTGTCTTGTTTAAAACAAGATAAAATATTTGAAGCTATTCAAGTTGGAATTTTGAGTGATGATAACAAGAAGGACATTAAGGAGGTTGCTATTCTTGCTGCAAGGTGTTTGAGACTTAGAGGTGATGAAAGACCTAGCATGAAGGAAGTGGCTATGGAGTTGGAAGGTATAAGGTTAACGGATAGGCATCCTTGGACTGATACAGAACAAAATTTTGAGGAAAATCAACGCTTACTTCATGAGGCATCTTCTAGCATTTATAATGAAATTGATGATGATAGCTCTAATCTTGGATATACCACTGTGTATGATAGCTTGAAAGATCAACCATTGATTGCCTTGGATGATGGAAGATGA 2244 0.3659 MKQNTKLTQLCQILVVTISISMVTIVYSSNESFSTSLPGCKSTCGNITIPYPFGIPNSSKPNQETCFLSRKFNVTCVNDTKLLWGNVQVNNISIPEGQMEVSFSISSYCDNVTWIKPSLDTASFRISSKENKFVTVGCDSYGYLNSVFNKKTYSTGCLTRCYGNRDGIENGTCSGIGCCQVDIPHMMRNISVKVSEFPDSTENTGCSSSFIVKNGFYNFSLSHLDNFPSKKLPLILDWSIGSENCTVSNACKNNSECIDLEIDSGGYRCKCKDRYTGNPYHPDGCTDIDECKTNNTCITKENCHNLEGSYQCICPDRQPENATFAGGCKDHRQLDLVTKISIGTSAGLIVLFVAISSLYLTCQKRKLIKLKQKFFQQNGGSILLQQLSTGEDSSQSAHIFTEEELKKATKNYDESLIIGRGGFGTVFKGILPGNKIVAVKKSKIIDASQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPSLVYEFVSHGTLFDFIQSTKDEANNPTWKTRLRIAAETAGALSYLHSAAAIPIIHRDVKSTNILLDENYTAKVSDFGASRLVPLDQTEIATMVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTGDKPLSFNRPEESISLAMHFLSCLKQDKIFEAIQVGILSDDNKKDIKEVAILAARCLRLRGDERPSMKEVAMELEGIRLTDRHPWTDTEQNFEENQRLLHEASSSIYNEIDDDSSNLGYTTVYDSLKDQPLIALDDGR 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00991 747 Gene3D Phosphorylase Kinase; domain 1 380 487 - -
Trre2g00991 747 Gene3D Transferase(Phosphotransferase) domain 1 488 711 - -
Trre2g00991 747 CDD EGF_CA 287 316 - -
Trre2g00991 747 Pfam Wall-associated kinase 171 272 IPR013695 GO:0004674|GO:0016020
Trre2g00991 747 Pfam EGF-like domain 245 278 IPR000742 -
Trre2g00991 747 CDD STKc_IRAK 418 686 - -
Trre2g00991 747 Pfam Calcium-binding EGF domain 287 316 IPR001881 GO:0005509
Trre2g00991 747 ProSiteProfiles EGF-like domain profile. 241 286 IPR000742 -
Trre2g00991 747 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 33 696 IPR045274 GO:0007166
Trre2g00991 747 Gene3D Laminin 287 321 - -
Trre2g00991 747 FunFam Wall-associated receptor kinase 2 382 487 - -
Trre2g00991 747 CDD EGF_CA 245 277 - -
Trre2g00991 747 ProSiteProfiles Protein kinase domain profile. 412 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00991 747 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 303 314 IPR000152 -
Trre2g00991 747 SUPERFAMILY Protein kinase-like (PK-like) 393 693 IPR011009 -
Trre2g00991 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Trre2g00991 747 ProSitePatterns Calcium-binding EGF-like domain signature. 287 312 IPR018097 GO:0005509
Trre2g00991 747 Pfam Wall-associated receptor kinase galacturonan-binding 40 101 IPR025287 GO:0030247
Trre2g00991 747 Pfam Protein kinase domain 414 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00991 747 SMART egfca_6 287 329 IPR001881 GO:0005509
Trre2g00991 747 SMART egfca_6 242 286 IPR001881 GO:0005509
Trre2g00991 747 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Trre2g00991 747 FunFam Wall-associated receptor kinase 2 488 706 - -
Trre2g00991 747 SUPERFAMILY EGF/Laminin 286 316 - -
Trre2g00991 747 Gene3D Laminin 241 279 - -
Trre2g00991 747 SMART serkin_6 412 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00991 Trre-Chr2 7825586 7833364 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00991 40 747 Receptor kinase-like Gene Family AT1G21230 45.306 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre2g00991 Pkinase 7.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00991 - - gsj:114381577 915.605