Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g00987 | ATGGTGCAAGGAACTCTTGGATACTTAGATCCGGAGTATATGCAAACACATCAATTAACCGAGAAAAGTGATGTTTATAGCTTTGGCGTAGTTCTTGCCGAGCTTTTAACAAGGGACAAACCTCTTTCTTTTAATAGGCCGGAAGAGAGCATTAGTCTTGCTGTGCACTTTTTGTCGTGTTTAAAACAAGATCGAATTTTCGAAGCTGTTCAAGTTGGTATTTTGAATGATGAAAACAAGAAAGAGATTAAAGAAGTTGCTATTCTTGCAGCAAGGTGTTTGAGACTTAGAGGTGATGAAAGACCTAGCATGAAGGAAGTGGCTATGGAGTTGGAAGGTATAAGGTTAACTGAGAGGCATCCTTGGAATGAGAGAGAGCAAAATTTTGAAGAGGGTCAAAGCTTACTTCATGAAGCATTTTCTAGCATTTATAATGAAATTGGTGATCATAGCTATAATGTTGGATATACTACCGGGTATGATAGCTTGAGAGATCAACCATTGATTGTTTTGGATGATGGAAGATAA | 528 | 0.3788 | MVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTRDKPLSFNRPEESISLAVHFLSCLKQDRIFEAVQVGILNDENKKEIKEVAILAARCLRLRGDERPSMKEVAMELEGIRLTERHPWNEREQNFEEGQSLLHEAFSSIYNEIGDHSYNVGYTTGYDSLRDQPLIVLDDGR | 175 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g00987 | 175 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 139 | - | - | |
Trre2g00987 | 175 | Pfam | Protein kinase domain | 2 | 107 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00987 | 175 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 122 | IPR011009 | - | |
Trre2g00987 | 175 | ProSiteProfiles | Protein kinase domain profile. | 1 | 123 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00987 | 175 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 1 | 123 | IPR045274 | GO:0007166 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g00987 | Trre-Chr2 | 7799006 | 7799533 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g00987 | 1 | 175 | Receptor kinase-like Gene Family | AT1G21240 | 46.023 | 9.77e-42 | 144 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Trre2g00987 | Pkinase | 2.1e-11 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g00987 | - | - | tpra:123893257 | 286.574 |