Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00987 ATGGTGCAAGGAACTCTTGGATACTTAGATCCGGAGTATATGCAAACACATCAATTAACCGAGAAAAGTGATGTTTATAGCTTTGGCGTAGTTCTTGCCGAGCTTTTAACAAGGGACAAACCTCTTTCTTTTAATAGGCCGGAAGAGAGCATTAGTCTTGCTGTGCACTTTTTGTCGTGTTTAAAACAAGATCGAATTTTCGAAGCTGTTCAAGTTGGTATTTTGAATGATGAAAACAAGAAAGAGATTAAAGAAGTTGCTATTCTTGCAGCAAGGTGTTTGAGACTTAGAGGTGATGAAAGACCTAGCATGAAGGAAGTGGCTATGGAGTTGGAAGGTATAAGGTTAACTGAGAGGCATCCTTGGAATGAGAGAGAGCAAAATTTTGAAGAGGGTCAAAGCTTACTTCATGAAGCATTTTCTAGCATTTATAATGAAATTGGTGATCATAGCTATAATGTTGGATATACTACCGGGTATGATAGCTTGAGAGATCAACCATTGATTGTTTTGGATGATGGAAGATAA 528 0.3788 MVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTRDKPLSFNRPEESISLAVHFLSCLKQDRIFEAVQVGILNDENKKEIKEVAILAARCLRLRGDERPSMKEVAMELEGIRLTERHPWNEREQNFEEGQSLLHEAFSSIYNEIGDHSYNVGYTTGYDSLRDQPLIVLDDGR 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00987 175 Gene3D Transferase(Phosphotransferase) domain 1 1 139 - -
Trre2g00987 175 Pfam Protein kinase domain 2 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00987 175 SUPERFAMILY Protein kinase-like (PK-like) 2 122 IPR011009 -
Trre2g00987 175 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00987 175 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 123 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00987 Trre-Chr2 7799006 7799533 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00987 1 175 Receptor kinase-like Gene Family AT1G21240 46.023 9.77e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre2g00987 Pkinase 2.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00987 - - tpra:123893257 286.574