Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00986 ATGGTAACAATAGTATATTCATCAAATGAATCCTTTTCTACTTCCCTACCAGGTTGCAAAAACAAATGTGGAAATGTCACTGTTCCATATCCATTTGGTATACCAAATTCATCAACACCAAATCAAGGAACTTGTTTCCTAGAGGAAAAATTTAAAGTCACATGTGTAGATGACACAAAATTACTTTGGGGCAATGTACAAGTTAACAACATAAGCATCCCCGAAGGACAAATGGAAGTGTCATTTTTTATCTCCAGTTATTGTGATAACGTAACAAGGATTAAACCCTCTTTAGACACTGCCAGTTTCAGAATATCCAGCAAAGAAAACAAGTTTGTAACGGTTGGTTGTGACAGTTACGGTTATCTCAACAGCGTTTTCAACAAAAAAACATATTCGACCGGTTGCTTAACAAGATGTTATGGTAATCGAGACGGAATTGAAAACGGAACATGTTCGGGTATCGGTTGTTGTCAAGTTGATATTCCACGTTTGATGAGGAATATACGTGTTGAAGTTTCTGAATTTCCTAACTCCACGGAAAATACTGGGTGTAGCTATTCTTTTATTGTTAAAAATGGTTTCTATAATTTTTCTCTTTCTCATTTGGATAATTTTCCTTCTAAGGAGCTTCCATTGATTCTTGATTGGAGTATTGGAAGTGAAAATTGTACGGTTTCAAATGCTTGCAAGAATAATAGTGAGTGCATTGATTTGGAAATTGATTCTGGTGGTTACCGGTGTAAATGTAAGGATCGTTATACAGGAAACCCGTATCATCCAGATGGCTGCACAGACATTGATGAATGTAAGACAAATAACCACACATGCATAAGTGGAAATCATTGTCGCAACACGGATGGGTATTACGAGTGTTTTTGTCCGCACGGGCAATCCGGTAATGGAACAAAGGCAGGAGGGTGCAGTAAAGGAGATTTAATTACGAAGGTTGCCATTGGAGCAAGTGCTGGACTCATTGTTCTATTTGTGGCGATTTCATCTCTTTATTTGACATACCAACAAAGGAAACTCATCAAACTAAAGCAAAAATTCTTTCAACAAAACGGTGGTTCCATTTTGTTACAACAACTATCTACAAGAGAAGACACGTCACAATCAGCTCAAATATTCACGGAAGACGAACTTAAGAAAGCCACCAAAAACTACGACGAAAGCTTAATCATCGGTAGAGGAGGTTTTGGTACAGTCTTCAAAGGAATTTTACCCAATAACAAAATCGTGGCTGTAAAAAAGTCCAAAATAATAGACGCAAATCAAATTGAGCAATTCATTAACGAGGTAGTTGTTCTATCCCAAATAAATCACAGGAACATCGTCAAACTCTTAGGATGTTGTTTAGAGACAGAAGTTCCTTCCTTGGTTTACGAATTTGTTAGCCACGGTACGCTTTTCGACTTCATACAAAGTACTAAAGATGAAGCAAATAATCCAACATGGAAAACACGTTTAAGGATAGCAGCAGAGACAGCCGGAGCTTTGTCGTATCTACATTCGGCTGCTGCAATACCAATTATTCATAGAGATGTTAAGAGTACCAACATTCTCTTGGATGAAAATTACACTGCAAAAGTTTCCGATTTCGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAGATAGCAACAATGGTGCAAGGAACTCTCGGATACTTAGATCCAGAGTATATGCAAACACATCAATTAACTGAGAAAAGTGATGTTTATAGCTTTGGCGTAGTTCTTGCAGAGCTTTTAACAGGGGACAAACCTCTTTCTTTTAATAGGCCGGAAGAGAGCATTAGTCTGTCTATGCACTTTTTGTCTTGTTTAAAACAAGATAAAATATTTGAAGCTATTCAAGTTGGAATTTTGAGTGATGATAACAAGAAGGACATTAAGGAGGTTGCTATTCTTGCTGCAAGGTGTTTGAGACTTAGAGGTGAAGAAAGACCTAGCATGAAGGAGGTGGCTATGGAGTTGGAAGGTATAAGGTTAACGGATAGGCATCCTTGGACTGATACAGAACAAAATTTTGAGGAAAATCAACGCTTACTTCATGAGGCATCTTCTAGCATTTATAATGAAATTGATGATGATAGCTCTAATCTTGGATATACCACTGTGTATGATAGCTTGAAAGATCAACCATTGATTGCCTTGGATGATGGAAGATGA 2175 0.3756 MVTIVYSSNESFSTSLPGCKNKCGNVTVPYPFGIPNSSTPNQGTCFLEEKFKVTCVDDTKLLWGNVQVNNISIPEGQMEVSFFISSYCDNVTRIKPSLDTASFRISSKENKFVTVGCDSYGYLNSVFNKKTYSTGCLTRCYGNRDGIENGTCSGIGCCQVDIPRLMRNIRVEVSEFPNSTENTGCSYSFIVKNGFYNFSLSHLDNFPSKELPLILDWSIGSENCTVSNACKNNSECIDLEIDSGGYRCKCKDRYTGNPYHPDGCTDIDECKTNNHTCISGNHCRNTDGYYECFCPHGQSGNGTKAGGCSKGDLITKVAIGASAGLIVLFVAISSLYLTYQQRKLIKLKQKFFQQNGGSILLQQLSTREDTSQSAQIFTEDELKKATKNYDESLIIGRGGFGTVFKGILPNNKIVAVKKSKIIDANQIEQFINEVVVLSQINHRNIVKLLGCCLETEVPSLVYEFVSHGTLFDFIQSTKDEANNPTWKTRLRIAAETAGALSYLHSAAAIPIIHRDVKSTNILLDENYTAKVSDFGASRLVPLDQTEIATMVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTGDKPLSFNRPEESISLSMHFLSCLKQDKIFEAIQVGILSDDNKKDIKEVAILAARCLRLRGEERPSMKEVAMELEGIRLTDRHPWTDTEQNFEENQRLLHEASSSIYNEIDDDSSNLGYTTVYDSLKDQPLIALDDGR 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00986 724 Gene3D Laminin 220 258 - -
Trre2g00986 724 Pfam Wall-associated kinase 150 251 IPR013695 GO:0004674|GO:0016020
Trre2g00986 724 Pfam Protein kinase domain 391 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00986 724 Gene3D Phosphorylase Kinase; domain 1 355 464 - -
Trre2g00986 724 ProSiteProfiles Protein kinase domain profile. 389 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00986 724 SUPERFAMILY EGF/Laminin 265 303 - -
Trre2g00986 724 Gene3D Transferase(Phosphotransferase) domain 1 465 688 - -
Trre2g00986 724 SMART egfca_6 221 265 IPR001881 GO:0005509
Trre2g00986 724 SMART egfca_6 266 309 IPR001881 GO:0005509
Trre2g00986 724 ProSitePatterns Calcium-binding EGF-like domain signature. 266 292 IPR018097 GO:0005509
Trre2g00986 724 ProSitePatterns Protein kinases ATP-binding region signature. 395 418 IPR017441 GO:0005524
Trre2g00986 724 FunFam Fibrillin 2 261 306 - -
Trre2g00986 724 CDD EGF_CA 266 300 - -
Trre2g00986 724 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 12 673 IPR045274 GO:0007166
Trre2g00986 724 ProSiteProfiles EGF-like domain profile. 266 304 IPR000742 -
Trre2g00986 724 CDD EGF_CA 224 256 - -
Trre2g00986 724 SMART serkin_6 389 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00986 724 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 283 294 IPR000152 -
Trre2g00986 724 FunFam Wall-associated receptor kinase 2 465 683 - -
Trre2g00986 724 Pfam Calcium-binding EGF domain 266 306 IPR001881 GO:0005509
Trre2g00986 724 CDD STKc_IRAK 395 663 - -
Trre2g00986 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 511 523 IPR008271 GO:0004672|GO:0006468
Trre2g00986 724 Gene3D Laminin 266 308 - -
Trre2g00986 724 FunFam Wall-associated receptor kinase 2 359 464 - -
Trre2g00986 724 ProSiteProfiles EGF-like domain profile. 220 265 IPR000742 -
Trre2g00986 724 SUPERFAMILY Protein kinase-like (PK-like) 375 682 IPR011009 -
Trre2g00986 724 SMART egf_5 223 265 IPR000742 -
Trre2g00986 724 SMART egf_5 269 309 IPR000742 -
Trre2g00986 724 Pfam Wall-associated receptor kinase galacturonan-binding 19 80 IPR025287 GO:0030247
Trre2g00986 724 Pfam EGF-like domain 224 257 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00986 Trre-Chr2 7787112 7791178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00986 19 724 Receptor kinase-like Gene Family AT1G21230 44.884 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre2g00986 Pkinase 5.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00986 - - gmx:106795446 941.799