Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00985 ATGAAACAGAACACAAAGCTCACAAAACTATGCCAAATTTTAGTGGTAACAATATCAATATCCATGGTAACAATAGTATATTCATCAAATGAATCCTTTTCTACTTCCCTACCAGGTTGCAAAAACAAATGTGGAAATGTCACTGTTCCATATCCATTTGGTATACCAAATTCATCAACACCAAATCAAGGAACTTGTTTCCTAGAGGAAAAATTTAAAGTCACATGTGTAGATGACACAAAATTACTTTGGGGCAATGTACAAGTTAACAACATAAGCATCCCCGAAGGACAAATGGAAGTGTCATTTTTTATCTCCAGTTATTGTGATAACGTAACAAGGATTAAACCCTCTTTAGACACTGCCAGTTTCAGAATATCCAGCAAAGAAAACAAGTTTGTAACGGTTGGTTGTGACAGTTACGGTTATCTCAACAGCGTTTTCAACAAAAAAACATATTCGACCGGTTGCTTAACAAGATGTTATGGTAATCGAGACGGAATTGAAAACGGAACATGTTCGGGTATCGGTTGTTGTCAAGTTGATATTCCACGTTTGATGAGGAATATACGTGTTGAAGTTTCTGAATTTCCTAACTCCACGGAAAATACTGGGTGTAGCTATTCTTTTATTGTTAAAAATGGTTTCTATAATTTTTCTCTTTCTCATTTGGATAATTTTCCTTCTAAGGAGCTTCCATTGATTCTTGATTGGAGTATTGGAAGTGAAAATTGTACGGTTTCAAATGCTTGCAAGAATAATAGTGAGTGCATTGATTTGGAAATTGATTCTGGTGGTTACCGGTGTAAATGTAAGGATCGTTATACAGGAAACCCGTATCATCCAGATGGCTGCACAGACATTGATGAATGTAAGACAAATAACCACACATGCATAAGTGGAAATCATTGTCGCAACACGGATGGGTATTACGAGTGTTTTTGTCCGCACGGGCAATCCGGTAATGGAACAAAGGCAGGAGGGTGCAGTAAAGGAGATTTAATTACGAAGGTTGCCATTGGAGCAAGTGCTGGACTCATTGTTCTATTTGTGGCGATTTCATCTCTTTATTTGACATACCAACAAAGGAAACTCATCAAACTAAAGCAAAAATTCTTTCAACAAAACGGTGGTTCCATTTTGTTACAACAACTATCTACAAGAGAAGACACGTCACAATCAGCTCAAATATTCACGGAAGACGAACTTAAGAAAGCCACCAAAAACTACGACGAAAGCTTAATCATCGGTAGAGGAGGTTTTGGTACAGTCTTCAAAGGAATTTTACCCAATAACAAAATCGTGGCTGTAAAAAAGTCCAAAATAATAGACGCAAATCAAATTGAGCAATTCATTAACGAGGTAGTTGTTCTATCCCAAATAAATCACAGGAACATCGTCAAACTCTTAGGATGTTGTTTAGAGACAGAAGTTCCTTCCTTGGTTTACGAATTTGTTAGCCACGGTACGCTTTTCGACTTCATACAAAGTACTAAAGATGAAGCAAATAATCCAACATGGAAAACACGTTTAAGGATAGCAGCAGAGACAGCCGGAGCTTTGTCGTATCTACATTCGGCTGCTGCAATACCAATTATTCATAGAGATGTTAAGAGTACCAACATTCTCTTGGATGAAAATTACACTGCAAAAGTTTCCGATTTCGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAGATAGCAACAATGGTGCAAGGAACTCTCGGATACTTAGATCCAGAGTATATGCAAACACATCAATTAACTGAGAAAAGTGATGTTTATAGCTTTGGCGTAGTTCTTGCAGAGCTTTTAACAGGGGACAAACCTCTTTCTTTTAATAGGCCGGAAGAGAGCATTAGTCTGTCTATGCACTTTTTGTCTTGTTTAAAACAAGATAAAATATTTGAAGCTATTCAAGTTGGAATTTTGAGTGATGATAACAAGAAGGACATTAAGGAGGTTGCTATTCTTGCTGCAAGGTGTTTGAGACTTAGAGGTGAAGAAAGACCTAGCATGAAGGAGGTGGCTATGGAGTTGGAAGGTATAAGGTTAACGGATAGGCATCCTTGGACTGATACAGAACAAAATTTTGAGGAAAATCAACGCTTACTTCATGAGGCATCTTCTAGCATTTATAATGAAATTGATGATGATAGCTCTAATCTTGGATATACCACTGTGTATGATAGCTTGAAAGATCAACCATTGATTGCCTTGGATGATGGAAGATGA 2238 0.374 MKQNTKLTKLCQILVVTISISMVTIVYSSNESFSTSLPGCKNKCGNVTVPYPFGIPNSSTPNQGTCFLEEKFKVTCVDDTKLLWGNVQVNNISIPEGQMEVSFFISSYCDNVTRIKPSLDTASFRISSKENKFVTVGCDSYGYLNSVFNKKTYSTGCLTRCYGNRDGIENGTCSGIGCCQVDIPRLMRNIRVEVSEFPNSTENTGCSYSFIVKNGFYNFSLSHLDNFPSKELPLILDWSIGSENCTVSNACKNNSECIDLEIDSGGYRCKCKDRYTGNPYHPDGCTDIDECKTNNHTCISGNHCRNTDGYYECFCPHGQSGNGTKAGGCSKGDLITKVAIGASAGLIVLFVAISSLYLTYQQRKLIKLKQKFFQQNGGSILLQQLSTREDTSQSAQIFTEDELKKATKNYDESLIIGRGGFGTVFKGILPNNKIVAVKKSKIIDANQIEQFINEVVVLSQINHRNIVKLLGCCLETEVPSLVYEFVSHGTLFDFIQSTKDEANNPTWKTRLRIAAETAGALSYLHSAAAIPIIHRDVKSTNILLDENYTAKVSDFGASRLVPLDQTEIATMVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTGDKPLSFNRPEESISLSMHFLSCLKQDKIFEAIQVGILSDDNKKDIKEVAILAARCLRLRGEERPSMKEVAMELEGIRLTDRHPWTDTEQNFEENQRLLHEASSSIYNEIDDDSSNLGYTTVYDSLKDQPLIALDDGR 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00985 745 FunFam Wall-associated receptor kinase 2 380 485 - -
Trre2g00985 745 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 304 315 IPR000152 -
Trre2g00985 745 CDD EGF_CA 287 321 - -
Trre2g00985 745 Gene3D Laminin 287 329 - -
Trre2g00985 745 ProSiteProfiles EGF-like domain profile. 287 325 IPR000742 -
Trre2g00985 745 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524
Trre2g00985 745 Pfam Wall-associated kinase 171 272 IPR013695 GO:0004674|GO:0016020
Trre2g00985 745 ProSiteProfiles Protein kinase domain profile. 410 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00985 745 Pfam EGF-like domain 245 278 IPR000742 -
Trre2g00985 745 FunFam Wall-associated receptor kinase 2 486 704 - -
Trre2g00985 745 ProSiteProfiles EGF-like domain profile. 241 286 IPR000742 -
Trre2g00985 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 33 694 IPR045274 GO:0007166
Trre2g00985 745 CDD EGF_CA 245 277 - -
Trre2g00985 745 Gene3D Phosphorylase Kinase; domain 1 376 485 - -
Trre2g00985 745 SMART egfca_6 287 330 IPR001881 GO:0005509
Trre2g00985 745 SMART egfca_6 242 286 IPR001881 GO:0005509
Trre2g00985 745 Gene3D Laminin 241 279 - -
Trre2g00985 745 Pfam Protein kinase domain 412 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00985 745 SUPERFAMILY Protein kinase-like (PK-like) 396 703 IPR011009 -
Trre2g00985 745 SUPERFAMILY EGF/Laminin 286 324 - -
Trre2g00985 745 FunFam Fibrillin 2 282 327 - -
Trre2g00985 745 Gene3D Transferase(Phosphotransferase) domain 1 486 709 - -
Trre2g00985 745 ProSitePatterns Calcium-binding EGF-like domain signature. 287 313 IPR018097 GO:0005509
Trre2g00985 745 Pfam Wall-associated receptor kinase galacturonan-binding 40 101 IPR025287 GO:0030247
Trre2g00985 745 SMART serkin_6 410 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00985 745 SMART egf_5 244 286 IPR000742 -
Trre2g00985 745 SMART egf_5 290 330 IPR000742 -
Trre2g00985 745 CDD STKc_IRAK 416 684 - -
Trre2g00985 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Trre2g00985 745 Pfam Calcium-binding EGF domain 287 327 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00985 Trre-Chr2 7787112 7791241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00985 40 745 Receptor kinase-like Gene Family AT1G21230 44.884 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre2g00985 Pkinase 5.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00985 - - gmx:106795446 944.11