Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g00962 | ATGTGCAGAGAAAAATCATTCTTATGTTTCCTCCAAATTATGATTTTTGTGCTACTACTGCATCATAATCATCATCAAACATGTGATGCAACAAATAGTAAAAACAAAACTTGTCCCTCTTCTTCATGTGGCAAAATCAGCAACATAAAATATCCGTTTCGACTTAAGAATGACCCAACAACCTGTGGCGATCCGAGGTATGAGTTATCTTGCGAAAACAACAAAACAATGTTAACTTTGTCTTCGGGTAAATACTATGTGAAATCAATCAACTACAATAACTACACAATTCGGTTAGTTGATCCCGGAATCCAAGAGTCTGATTGCTCCTCCATTCCTCGGTATTTCTTAACAACATCCAATTTCACAAGTTCTTATGATGATGACTACTTCGCAGATCCATATCAAACCTTCCAAAAAAAACTACCGGAAGGTGGAACATTACCGTTGTTCCAGCACATAGTTTACATGAATTGTAGCAATCCTATAGGGGATGATCCCGCGTACGCGGATACAGCTTCTTGCATCAAGCTAAATTCCCAAGGTGGCTATGTTTATGCCATTACCGGGGATTTGACGGTTGGAAACTTGAAACATGATGACTGCCACGTCAAGGTTGTTACCGCGATATCTTTTTTCGGTTATAATCGTAGTGGAGTTGAACCATGTAATTTCTATCAAAAGTATTCGTACAGTGAAATTCATAGGATGTTGGTGGATGGATTTGAGGTTTCTTGGATCAGTAGTGCTTGTGAAGATTTTTGTAAAGATGAATCAAACCCATATTGCTATTTGGAAGTAACCACTGGGAGTCTTCATTGCAACGATCATGGTGATTTCTGTGTAACAACAATGGGATTTCATGTTGGTTGTGGAACCCATTCAAAGCTGCGAATGTTTGTCGAAGGTACTATGTTTGGCATTGCCAAAGGATTTCTACAAGCTTTTGGTGCGACAATATACGATGGATCAAGAGGCATTTCTGAATCTATACATGGAATTGACATAGGAACAATCATTGGAAAGTATATTTTGTCACCATACATTTTAGTGAGACTTATGTTGGGTCTTGTAGTTTTCTTTGCAAAGTTGATACATATATATCGAACAAGGCATACATCGATGTATGAAAATATTGAAGATTTTCTTCAAGGGAACTCCCTGATGCCAATAAGGTATTCATACAAAGAGATAAAGAACATGACTAGAGGTTTTAAGGACAAGTTGGGTGAAGGAGGCTATGGTAAGGTTTATAAGGGAAAGCTACGTAGTGGCCCTTTGGTAGCCATAAAGATGTTGGGTAAATCTAAGGGCAATGGACAAGATTTCATTAGTGAAGTTGCAACCATAGGAAAAATACATCACACCAATGTGGTGCAACTTATTGGATTTTGTGTTGAGGGTTCAAAGCGTGCTCTTGTTTATGATTTCATGCCCAATAGCTCCCTTGATAAATACATTTCCTCCGGAGAAGATCATATTTCCTTAACTTATAAACAAATGTACGACATATCTCTTGGAGTGGCTCGTGGAATTGCTTATTTGCATCAAGGTTGTGACATGCAAATTTTACATTTTGACATCAAGCCCCATAACATACTTCTTGACAAGGATTTTATCGCCAAGGTTTCAGACTTTGGTCTTGCAAAACTATATCCTGTTGACAATAGCATTGTAACATTGACTGCTGCAAGAGGAACGATTGGTTATATGGCTCCAGAATTGTTCTACAAAAATATTGGTGGAGTTTCCTATAAGGCTGATGTATATAGTTTTGGAATGCTCTTAATGGAAATAGCAAACAGGAGAAGAAATTTGAACTCAAATGCAGATGATTCAAGCCAAATTTTCTTTCCCTATTGGATTTACAATGAATTGATTGAAGAAAGGGAGATAGAAATATTGGGAGAAGTTACTGATGAGGATAAGAAAAATGTGAAGAAAATGTTCATAGTTGCTCTATGGTGTATACAATTGAACCCCAATGATCGTCCTTCAATGGACAGAGTAATAGAAATGCTCGAAGGAGATACTAAAGACATTGAAATTCCTCCAAAACCTTCTCCATATCCAACTGAAATTATTCAAGATCATGTAACTAGTTCTAGTGAATCTGTATCGAATGATGATGCAACTGGCTCAATTAGTTTTCGTGAGGAAACTATAGAAGTTCCTTTACTATAG | 2184 | 0.3723 | MCREKSFLCFLQIMIFVLLLHHNHHQTCDATNSKNKTCPSSSCGKISNIKYPFRLKNDPTTCGDPRYELSCENNKTMLTLSSGKYYVKSINYNNYTIRLVDPGIQESDCSSIPRYFLTTSNFTSSYDDDYFADPYQTFQKKLPEGGTLPLFQHIVYMNCSNPIGDDPAYADTASCIKLNSQGGYVYAITGDLTVGNLKHDDCHVKVVTAISFFGYNRSGVEPCNFYQKYSYSEIHRMLVDGFEVSWISSACEDFCKDESNPYCYLEVTTGSLHCNDHGDFCVTTMGFHVGCGTHSKLRMFVEGTMFGIAKGFLQAFGATIYDGSRGISESIHGIDIGTIIGKYILSPYILVRLMLGLVVFFAKLIHIYRTRHTSMYENIEDFLQGNSLMPIRYSYKEIKNMTRGFKDKLGEGGYGKVYKGKLRSGPLVAIKMLGKSKGNGQDFISEVATIGKIHHTNVVQLIGFCVEGSKRALVYDFMPNSSLDKYISSGEDHISLTYKQMYDISLGVARGIAYLHQGCDMQILHFDIKPHNILLDKDFIAKVSDFGLAKLYPVDNSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEIANRRRNLNSNADDSSQIFFPYWIYNELIEEREIEILGEVTDEDKKNVKKMFIVALWCIQLNPNDRPSMDRVIEMLEGDTKDIEIPPKPSPYPTEIIQDHVTSSSESVSNDDATGSISFREETIEVPLL | 727 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g00962 | 727 | Gene3D | Transferase(Phosphotransferase) domain 1 | 478 | 686 | - | - | |
Trre2g00962 | 727 | Gene3D | Phosphorylase Kinase; domain 1 | 380 | 477 | - | - | |
Trre2g00962 | 727 | ProSitePatterns | Protein kinases ATP-binding region signature. | 409 | 431 | IPR017441 | GO:0005524 | |
Trre2g00962 | 727 | Pfam | Wall-associated receptor kinase galacturonan-binding | 38 | 101 | IPR025287 | GO:0030247 | |
Trre2g00962 | 727 | ProSiteProfiles | Protein kinase domain profile. | 403 | 683 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00962 | 727 | SUPERFAMILY | Protein kinase-like (PK-like) | 388 | 675 | IPR011009 | - | |
Trre2g00962 | 727 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 376 | 696 | IPR045874 | GO:0004672 | |
Trre2g00962 | 727 | SMART | serkin_6 | 403 | 674 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00962 | 727 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 523 | 535 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g00962 | 727 | FunFam | PR5-like receptor kinase | 478 | 686 | - | - | |
Trre2g00962 | 727 | Pfam | Protein kinase domain | 406 | 672 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00962 | 727 | FunFam | serine/threonine-protein kinase PBS1-like | 371 | 477 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g00962 | Trre-Chr2 | 7655031 | 7657590 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g00962 | 30 | 688 | Receptor kinase-like Gene Family | AT5G38260 | 33.982 | 3.40e-105 | 333 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Trre2g00962 | Pkinase | 2.2e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g00962 | - | - | mtr:25482268 | 1093.18 |