Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g00934 | ATGCCTCCTCAACTTCGAACCAGAACACCAAAAACCAACCCGAACCCGAATCAAAACCCGATCATTAAACCCGCTCCAAGAGGTAGAAGAGGTAGACCTGCTAGAAACCGTAACCCGATCGTTGATTTTGCGCGTGATAATCAAATCGATAACAACCACCACCAAGTTCCAGAAAACGAACAACCTCACGCGCCTCTTGTTAGGGTTTCAAGAGATATAGTAATTAAGCAAGATATTATGGATGATGACTGTGATAGCGGTGGTCGGACTGCCGATAATAAAGCTCCGGTGGCTGAAGATGAAGGAACTACACCACCTATTCCTGAAAAAGTTCAGGTAGGTGGTTCACCGATGTATAGAGTAGATAGAAAGCTTGGGAAAGGAGGATTTGGACAGGTTTATGTTGGTCGCCGTGTCGGTGCCGGAGCAGGAGCTGCTGAGGTGGCTTTGAAGTTTGAGCATAAAAGTAGTAAGGGGTGTAATTACGGACCTCCTTACGAGTGGCAGGTTTACAATGTATTAGGTGGTAGTCATGGTGTTCCACGAGTTCATTACAAGGGAAAGCAAGGTGATTTCTATATTATGGTCATGGATATTCTTGGCCCTAGTTTATGGGATGCTTGGAATAACAAGACACACACGATGTCTGCTGAAATGGTGGCATGTATAGCAATCGAGGCTATCTCCATATTAGAAAAGATGCATTCTAGAGGATACGTGCATGGTGATGTAAAACCTGAGAACTTTTTGCTTGGCCCTCCGGGAACTCATGAAGAGAAAAAACTTTTTTTGGTTGATCTGGGATTAGCAACCCGTTGGCGTGATAATTCGACTGGTCTTCATGTTGACTACGATCAACGTCCAGATGTATTTAGGGGAACCGTTCGTTATGCAAGTGTCCACGCTCATCTTGGTAGGACAGGTAGCAGAAGAGATGATTTGGAATCTCTTGCTTACACACTAATATTCCTTCTTCGTGGACGGCTACCTTGGCAAGGATACCAGGGAGAAAATAAAGGATTTCTCGTCTGCAAGAAGAAAATGGCCACCTCACCAGAAAATATGTGTATTCTTTGTCCCGCACCGTTTCGGCAGTTTATCGAGTACGTAGTGAATTTGAAGTTTGACGAAGAACCAAATTATGCAAAATATATATCACTTTTCGATGGAATTGTTGGTCCAAATCCAGACATCAGACCCATAAACACTGATGGTGCACAGAAGCTTATATATCAGGTTGGACAGAAGAGAGGACGATTGACCATGGAAGAAGATGATGATGAACAGCCAAAGAAGAAAGTCAGAATGGGAATGCCAGCAACACAATGGATTAGTGTGTACAATGCACGCCGACCTATGAAGCAAAGGTACCATTACAATGTTACTGATGTGCGGTTGTCCCAACACATTGAGAAGGGATATGAAGATGGGTTATTTATCAGCAGCGTAGCGTGTTGTTCTAACCTTTGGGCACTGATTATGGATGCCGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCATCCCAATTCCTTCACAAGGAATGGATTATGGAACAGTGGGAAAAAAATTATTACATTAGTGCCATAGCAGGATCTAATAATGGGAGCTCTTTGGTCGTAATGTCGAAAGGGACCCAATATTTGCAGCAATCCTATAAGGTCAGTGAATCATTTCCATTTAAGTGGATTAATAAAAAGTGGAAAGAAGGATTTTTTGTCACTGCTATGGCCACTTCCGGAAGTAGATGGGCAATTGTCATGTCTCGTGGTGCTGGATTTTCAGATCAGGTTGTGGAGCTTGATTTTCTGTATCCTAGTGAAGGTATTCATCGAAGGTGGGACAGTGGTTACCGCATCACTTCAACTGCTGCTACATATGACCAAGCTGCTCTTGTTCTTAGCATTCCAAGAAAGAAACCAACTGATGAAACGCAAGAAACACTTCGCACATCCGACTTTCCTAGTACTCATGTCAAGGAAAAATGGTCGAAGAACCTCTATATTGCATCTATTTGTTATGGAAGAACAGTTTCATGA | 2040 | 0.4304 | MPPQLRTRTPKTNPNPNQNPIIKPAPRGRRGRPARNRNPIVDFARDNQIDNNHHQVPENEQPHAPLVRVSRDIVIKQDIMDDDCDSGGRTADNKAPVAEDEGTTPPIPEKVQVGGSPMYRVDRKLGKGGFGQVYVGRRVGAGAGAAEVALKFEHKSSKGCNYGPPYEWQVYNVLGGSHGVPRVHYKGKQGDFYIMVMDILGPSLWDAWNNKTHTMSAEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTHEEKKLFLVDLGLATRWRDNSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPENMCILCPAPFRQFIEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKLIYQVGQKRGRLTMEEDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVTDVRLSQHIEKGYEDGLFISSVACCSNLWALIMDAGTGFTAQVYELSSQFLHKEWIMEQWEKNYYISAIAGSNNGSSLVVMSKGTQYLQQSYKVSESFPFKWINKKWKEGFFVTAMATSGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDSGYRITSTAATYDQAALVLSIPRKKPTDETQETLRTSDFPSTHVKEKWSKNLYIASICYGRTVS | 679 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g00934 | 679 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Trre2g00934 | 679 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 239 | 251 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g00934 | 679 | CDD | STKc_CK1 | 118 | 388 | - | - | |
Trre2g00934 | 679 | MobiDBLite | consensus disorder prediction | 81 | 114 | - | - | |
Trre2g00934 | 679 | PANTHER | CASEIN KINASE-RELATED | 111 | 647 | - | - | |
Trre2g00934 | 679 | SMART | serkin_6 | 119 | 410 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00934 | 679 | Pfam | Protein kinase domain | 119 | 346 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00934 | 679 | FunFam | casein kinase 1-like protein HD16 | 92 | 435 | - | - | |
Trre2g00934 | 679 | ProSiteProfiles | Protein kinase domain profile. | 119 | 398 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00934 | 679 | Gene3D | Transferase(Phosphotransferase) domain 1 | 90 | 437 | - | - | |
Trre2g00934 | 679 | SUPERFAMILY | Protein kinase-like (PK-like) | 119 | 394 | IPR011009 | - | |
Trre2g00934 | 679 | ProSitePatterns | Protein kinases ATP-binding region signature. | 125 | 151 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g00934 | Trre-Chr2 | 7352549 | 7356909 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g00934 | 119 | 274 | EF-hand Containing Proteins | AT1G35670 | 29.375 | 1.06e-08 | 56.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CK1_CK1-Pl | Trre2g00934 | Pkinase | 6.1e-18 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g00934 | - | - | vvi:100254265 | 1118.99 |