Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00891 ATGGATGAAAGTGGTGTTGATGATGAGTTTAGGTGTATTACAACAAATGGGTCTGGTGGATGGAGGTGTAAAGAGAAAGCTTTACCTGGAAAAACTCAATGTGAGAAGCATCATGTGTATGATATTGATAGAACCAAAATGAAGAAGGAAAGTAGTTCTGATGAAAAGAAAGGTACAAAAGGAAAAGGTGAAGAGTGTTTACAAAATGGGGTTGTTGTTGATGATGGTACTTTTGGAGGGATTTTTGGTGGAGATGAAGTCAATGGTGGTGCTAATATTGATGTTGGTTGTGAAAGTTTTAATCTTTGGCAACAAGATGGTCAACAAGTTGGGGTTTTTGGACAAGGGAGTGGAAATTTAGGTCAATTTCTTGGTGATGGTGTTGAGTTTGTAGGTGGGTTTGTTGAGGATAGGAATAAGGTTAATGGTGGTTTAGGTCAGCCATGGAGTAGTGTAGGTGTATTTGGAAATGCTGGTGGTGTTTCTGGTGTTGGTAAAGAAGATAATGGAAATGGTATTGATGGTGTTTGTGGAAATGGTTCACTTGGTTTTCCTTCTGAAGGAATTGGAGGGTTGGTTGGTGGTGAAGCTGGTTTTGGGGATTTGTATGATAGTAGTTTTCAAGCACTTCTTAGTCAAGGTAGGGTTTGTGATGATGTGAATTTAGTTGTTGATGGAACTGGTTTTCAAGGGTTAGGTGATGTAAGTGCTTATGATTTTAGAGGCGAGGTTGGTGGCAGTAAATTTGAAGGCGAAAAAAATGTTGGTAGTATATTAGAGGTTCCTGACTCAGGTAACAAGGTGAAAGATATCGGCGTGGAAGAGGGAACGGAACTGTTATTAAGTGGAGGAGTTTCAATCAATAATGAGGCAACTGAAGTTTTGAAGCCATTGACTAAGAGAGGAGGAAGGCCTAAGGGTTCTAAGAATAAGAAGAAAGGGGTTAACTTAGCCTCGGATGGAGAAACTGTTTGTGGAAGTGGTAACGGTGGAGTGATTGGGACGAGCACTGTTTGTGGAAGGCCTAAGGGTTCCAAGAATAAGAAGAAAGGGGTTAACTTAGCCTCGGATGGAGAAACTGTTTGTGGAAGTGGTAACGGTGGAGTGATTGGGACGGGCAATGTTTGTGGAAGGCCTAAGGGTTCCAAGAATAAGAAGAAAGGGGTTAACTTAGCCTCGGATGGAGAAACTGTTTGTGGAAGTGGTAACGGTGGAGTGATTGGGACGGGCAATGTTTGTGGAAGGCCTAAGGGTTCCAAGAATAAGAAGAAAGGGGTTAACTTAGCCTCGGATGGAGAAACTGTTTGTGGAAGTGGTAACGGTGGAGTGATTGGGACGAGCACTGTTTGTGGAAGGCCTAAGGGTTCCAAGAATAAGAAGAAAGGGGTTAACTTAGCCTCGGATGGAGAAACTGTTGGTGGAAGTGGTAACGGTGGAGTGATTGGGACGAGCAATGTTTGTGGAAGGCCTAAGGGTTCCAAGAATAAGAAGAAAGGGGTTAACTTAGCCTCGGATGGAGAAACTGTTTGTGGAAGTGGTAATGCTGGAGCTATTGGGACAAGCACTGTTGAAGTTTTAGAGAATGAAAAATCAGCGTGTTGTGGTAAGGCTGGTCAGGAAGGTGTGGCCGAGGATGAGATTGCAAGGACAAAGAAGCGTGGTCAACCGGATGATTGGAAGCGTGGAAGGGAGATTATTTTGGCGGTTGGTTATGAAGTTGCTGGGTATGGTGACATTACAGAACCAACAAAGCGTGGTAGAAGAACAAAGGGTTCGGTAACCAAGGAGAAGAATGTCGAGGAGGTTAGTAGTGAAGGTGAGATAACTAGGCCAAAGAAGCGTGGTCGGGCAAGCCTAACTAATGAACTTGGTCCTGCATTGTGTACAAGGAATAAATTGAGAAGCATTGGATTTGAGGGTTATGAGCATCCAGGAATGTCTAGTGATGTTTGTCTTGAAGATGATGATGGAACCGCAAATGTTTTGCCAAGTAGTTTGGAGATTACTACATCGGCTCCTTCATGTGATGAGCAGGAAAAAGGTATTCCTTCTGAAGCCACCAAACATATTGAAAACATAATTGCACAGCGAATTGTTAAGCGTGGTCGACCGAAGGGATCGCCAAACAAGGAGAAAAAACTAGGAGATCAGGATTTGCCTGTCCAAACCCTTGGTCAAGACGAGGTTCAAAATGTTAAACCAAAAATGGGCCAACCAAAGGGGTCTAAAAATAGGAAGAAAAATATTGCTGGTGGAGCTGAAAGCGAGTTACATAAGGAGAAAAAAAGGCGTGGTAGGCCAAAGGGTTCTGGAGAAAAGCAAAAGGAGATTGTTGTTCAATCGGATTTGAAGATTGAAAGGCGTGGTAGGCCAAAGGGTTCCGGGAAAAAGCAAAAGAAGGCTGCGGCTCGATTGGCTTCACAGATTAAAAGTCAGAAGAGTACTTGTGTTGATGGTGTTTTGAGTATGAATGAAGAATCCATTTCACCGCCAGAAGGTCAAGTAAATAAAGAAGAAAAGTCAGATTTTGTCCCGGAGTGCTCAAAGGATTCCAGAATTGAAAAGAGAACAAAAGGATTGATGAGTGCATCCAGCAATGTCCATAAGAGGTGCAGTGAAAGACTAAGAACATTGCAAACCGACCACAAGAATTATCAAGATTTTGAAGTGGAAGAAACTTTTTCTGAAAATGAGGTGGAAGAAACTTTTTCTGAAAATGAGGTGGAAGAAACTATAGTCCATGATGGATTGGAATCTACAGATTTGATGGGTGACATAGAGATAAAAAAGGAGCGTAGAAATTCAAGGTGCCATCAGTGCTGGAAGAAAAGTAGGACTGGTCTCGTCGTTTGTACCAAGTGCAAAAGAAAGAAATATTGTTACGAGTGCATAGCAAAATGGTACCAAGATAAGACTAGAGAGGAGATAGAGACCGCTTGTCCTTTTTGTCTTGATTATTGCAATTGCCGACTGTGCTTGAAGAAAACTATATCTACAATGGATGAAAATGGTGAAGCAGATAGAGATGCCAAATTACAAAAATTGCTTTTCTTGCTTAAAAAAACATTGCCCTTACTCCAATATATCCAACGGGAGCAGAAATCAGAATTGGAAGTAGAAGCAAGCATACACGGTTCTCTGATGGTGGAAGAGGAGGATATTCTGCAGGCAGCAGTTGACGATGATGATCGAGTCTATTGTGACAACTGCAGTACATCCATTGTCAATTTCCACAGAAGTTGTACCAATCCTTATTGTCGGTACGATCTCTGTCTCACTTGTTGCACGGAACTAAGAAATGGAGTTCATTGCGAAGATATTCCTGCTATTGGTAATGAGGAAATGGTCGATACACCACCTGAAACTATTGCTTGGAGAGCAGAGACAAATGGTAGCATTCCTTGCCCTCCAAAAGCTAGAGGAGGTTGTGGTACTGCTACCCTTTCGCTGAGGCGCCTATTCAAAGCTAATTGGATTGACAAATTGACTAAAGGCGCAGAGGAACTTACAATCAAATATAACCCACCCATTGTTGATCTTTCTCTAGGATGTTCAGAATGCCATATTTTAGAGGAAGATGCAGCACATGATTCTGCAAGGAAGGCAGCTTCTAGAGAAACCGGTCATGACAACTTTTTGTACTGTCCAGATGCCGTTGAAATCGGAGACACGGAATTTGAGCATTTCCAAAGACACTGGATAAGAGGCGAACCTGTTATTGTAAGGAATGCTTATAAAAAGGCTACTGGCCTTAGCTGGGACCCAATGGTGATGTGGAGAGCTTTTAGGGGGGCAAGGAAAATTTTAAAAGAGGAGGCAGTTACTTTTAAAGCAATCGACTGCTTGGATTGGTGCGAGGTACAAGTTAACGCCTTTCAGTTCTTCAAAGGCTACTTGACAGGGCGTCATTACAGAAATGGATGGCCGGAGATGCTGAAGCTAAAAGATTGGCCTCCATCAAATTTTTTTGAAGAGTGTTTGCCAAGGCATGGTGCTGAGTTTACAGCAATGCTTCCTTTTAGTGATTATACACATCCCAAATCCGGTGTTTTAAACCTCGCCACAAAGCTCCCTGCTGTTTTGAAGCCAGATTTGGGTCCTAAAACATACATTGCTTATGGAGCTTTAGAAGAGTTGAGTAGAGGTGATTCTGTGACAAAACTACATTGCGACATTTCAGATGCAGTCAATATTCTGACACACACAGCTGATGTAAAGACACCAACATGGCAATCCAGAATTATAAAAAAGTTAAAGAAGAAGTACGAAGTTGAAGATATGCGCGAGCTCTATGGTCAAGACATTAAGGCAGCTGGTTCACGTGGAAGAAAACGCAGAAAGTGTCGGATAGGTAATGCCGTGGATCCTAAAATCCCTGAAAAAGAAGAAGACATTAGGGGTAGAGACTCAACCTTACTTGGAAGTCAAGGAAAAGAAGAGAAACTTGATGCAAAAGCTTGTGTTCAAGAATTCTCCGAACCCAACAGAAGTATATTAGATTTAAATGTGAGTGAACAGGAAATCTTTGATCCACCAAGGCTTCAGCAATTTGATCTCAATAGTCACGATTCCAGTTTCTTGGTTCCTGGAAATGATTGTGAGTTGATGCATTATGATAATGCGGAAGAACAACGGTGCTCACCACCAGGTGATGAATCTTGTAAAGGAATTTCACCAGGTATTGATAATCAACCTTGTAGTGAAACAAAAGAAACAAAATTTGTCAATGGATTAGATTCTTCAGATGAGTCCAGTTCGGATATTGAGACTGACAAAATAGAGTCAGTTGAAAATGACATATCGGGTAATGATGATCATTTGGAGACTCAATATGGGAGTGCTGTGTGGGACATATTCCGTAGGCAGGACGTACCAAAACTAACGGAGTACCTAAATAAACATTTTAGAGAGTTTCGCCACATAACTAGTCTTCCAGTGAGTTATGTGATTCATCCTATTCATGACCAGCACCTTTATTTAAATGAAAAGCACAAAAAGCAACTCAAGCTAGAATATGGTGTTGAACCGTGGACGTTTGAGCAATATCTTGGCGAAGCTGTTTTCATACCTGCAGGATGTCCACATCAAGTGAGAAATAGAAAGTCTTGCATAAAAGTGGCCATGGACTTCGTTTCTCCTGAGAATGTTCAGGAATGTGTTCGATTGACAGAAGAATTTCGCTTACTTCCAAAAAACCACAGATCTAAGGAAGATAAATTAGAGATAAAGAAGATGGCACTATATGCTGCTGATGTTGCTATTGCTGAAGTCACTGAACTCGTGGGAGCGAAATGA 5295 0.4179 MDESGVDDEFRCITTNGSGGWRCKEKALPGKTQCEKHHVYDIDRTKMKKESSSDEKKGTKGKGEECLQNGVVVDDGTFGGIFGGDEVNGGANIDVGCESFNLWQQDGQQVGVFGQGSGNLGQFLGDGVEFVGGFVEDRNKVNGGLGQPWSSVGVFGNAGGVSGVGKEDNGNGIDGVCGNGSLGFPSEGIGGLVGGEAGFGDLYDSSFQALLSQGRVCDDVNLVVDGTGFQGLGDVSAYDFRGEVGGSKFEGEKNVGSILEVPDSGNKVKDIGVEEGTELLLSGGVSINNEATEVLKPLTKRGGRPKGSKNKKKGVNLASDGETVCGSGNGGVIGTSTVCGRPKGSKNKKKGVNLASDGETVCGSGNGGVIGTGNVCGRPKGSKNKKKGVNLASDGETVCGSGNGGVIGTGNVCGRPKGSKNKKKGVNLASDGETVCGSGNGGVIGTSTVCGRPKGSKNKKKGVNLASDGETVGGSGNGGVIGTSNVCGRPKGSKNKKKGVNLASDGETVCGSGNAGAIGTSTVEVLENEKSACCGKAGQEGVAEDEIARTKKRGQPDDWKRGREIILAVGYEVAGYGDITEPTKRGRRTKGSVTKEKNVEEVSSEGEITRPKKRGRASLTNELGPALCTRNKLRSIGFEGYEHPGMSSDVCLEDDDGTANVLPSSLEITTSAPSCDEQEKGIPSEATKHIENIIAQRIVKRGRPKGSPNKEKKLGDQDLPVQTLGQDEVQNVKPKMGQPKGSKNRKKNIAGGAESELHKEKKRRGRPKGSGEKQKEIVVQSDLKIERRGRPKGSGKKQKKAAARLASQIKSQKSTCVDGVLSMNEESISPPEGQVNKEEKSDFVPECSKDSRIEKRTKGLMSASSNVHKRCSERLRTLQTDHKNYQDFEVEETFSENEVEETFSENEVEETIVHDGLESTDLMGDIEIKKERRNSRCHQCWKKSRTGLVVCTKCKRKKYCYECIAKWYQDKTREEIETACPFCLDYCNCRLCLKKTISTMDENGEADRDAKLQKLLFLLKKTLPLLQYIQREQKSELEVEASIHGSLMVEEEDILQAAVDDDDRVYCDNCSTSIVNFHRSCTNPYCRYDLCLTCCTELRNGVHCEDIPAIGNEEMVDTPPETIAWRAETNGSIPCPPKARGGCGTATLSLRRLFKANWIDKLTKGAEELTIKYNPPIVDLSLGCSECHILEEDAAHDSARKAASRETGHDNFLYCPDAVEIGDTEFEHFQRHWIRGEPVIVRNAYKKATGLSWDPMVMWRAFRGARKILKEEAVTFKAIDCLDWCEVQVNAFQFFKGYLTGRHYRNGWPEMLKLKDWPPSNFFEECLPRHGAEFTAMLPFSDYTHPKSGVLNLATKLPAVLKPDLGPKTYIAYGALEELSRGDSVTKLHCDISDAVNILTHTADVKTPTWQSRIIKKLKKKYEVEDMRELYGQDIKAAGSRGRKRRKCRIGNAVDPKIPEKEEDIRGRDSTLLGSQGKEEKLDAKACVQEFSEPNRSILDLNVSEQEIFDPPRLQQFDLNSHDSSFLVPGNDCELMHYDNAEEQRCSPPGDESCKGISPGIDNQPCSETKETKFVNGLDSSDESSSDIETDKIESVENDISGNDDHLETQYGSAVWDIFRRQDVPKLTEYLNKHFREFRHITSLPVSYVIHPIHDQHLYLNEKHKKQLKLEYGVEPWTFEQYLGEAVFIPAGCPHQVRNRKSCIKVAMDFVSPENVQECVRLTEEFRLLPKNHRSKEDKLEIKKMALYAADVAIAEVTELVGAK 1764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00891 1764 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 598 1761 IPR045109 GO:0032454|GO:0033169
Trre2g00891 1764 ProSiteProfiles WRC domain profile. 6 52 IPR014977 -
Trre2g00891 1764 ProSiteProfiles JmjC domain profile. 1334 1727 IPR003347 -
Trre2g00891 1764 ProSiteProfiles Zinc finger RING-type profile. 937 983 IPR001841 -
Trre2g00891 1764 MobiDBLite consensus disorder prediction 747 789 - -
Trre2g00891 1764 MobiDBLite consensus disorder prediction 669 813 - -
Trre2g00891 1764 Pfam JmjC domain, hydroxylase 1604 1710 IPR003347 -
Trre2g00891 1764 SUPERFAMILY Clavaminate synthase-like 1225 1754 - -
Trre2g00891 1764 SMART cupin_9 1327 1727 IPR003347 -
Trre2g00891 1764 MobiDBLite consensus disorder prediction 826 849 - -
Trre2g00891 1764 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 933 996 IPR018866 -
Trre2g00891 1764 MobiDBLite consensus disorder prediction 832 849 - -
Trre2g00891 1764 MobiDBLite consensus disorder prediction 694 717 - -
Trre2g00891 1764 Gene3D Cupin 1564 1736 - -
Trre2g00891 1764 Gene3D Cupin 1215 1454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00891 Trre-Chr2 7023078 7031116 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Trre2g00891 JmjC 2.8e-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00891 K15601 - gsj:114384813 1238.4