Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g00836 | ATGTGGTTGCAAAAGAATCAATGGGACAAGAAGGATGGGGTGAGTGGAATAGTGGCAGTGGCAATAGATACAGATAAAGGGAGCCAAAATGCACTTAAATGGTCCATTGATCATCTCATTTCAAAAGGCTCAACTATTGTTCTCATTCATGTCAAGGTTAAACCAACACCATCATCTATGTCAACCCCAAGGGCAGGGATGATTGAGCAATGCACAATGGTGCCTAAAGAACCTGATGAAATAACCAAAGAAATTTTCCGTCCATATCGCGTCTTTTGTGCGCGCAAAGATATACATTGCAAGGACATTGTACTAGAACATGGAGATGTATCCAAAGCATTAATTGAATATACTTCTCAATCAGCAATTGAGCATTTGGTTATAGGCTCTTCCAATAAAAATGGTTTTCTCAAAAGATTCAAGGTGATAGATATTCCAGGAACTGTATCTAAAGGGGCACCAGATTTTTGTACAGTATATATTGTTGGTAAAGGAAAAATTCAATCTATGAGATCTGCTTCTAGACCTGCTCCTGCATTTTCACCTCTACAAACTCAACTTAGTCAATCTAGTAGTAGGTCAGATCATTCAGAACCTCGTATGCCGATGGCAGTTAAAGCACCTGAGAGGAGATCATTTGAGGGACCGCCTCGTAGATCCCAAGATGGAGCAGATTCATTCAGGTCACCGTTCACTCGGAGACGTCCAAATGACAAGTCATATGGAGAACTTCCTATGCCAGATAGTGACATATCCTTTGTAAGCTCAGGAAGACCTAGTACAGATCGTTTATTCCCTTCAGTATTTAACCACAACTACAATTCAGAGTCAAGTTTTTCCAATCCTAGGCTATCATATAGTTCTGATACTGATGGAAACTATAGCTTTGAATCAATAAATTATGGAAGAAGGTCTATTGATATTGCCAATCCTGATTTCTCATCTTTCTCACATGATAGTGATGGACTTTCGTCTTCTGCATCAAATGTGGATGATGTGGAAGCTGAAATGAGGAGGCTGAAATTGGAGTTAAAGCAAACAATGGAAATGTATAGCACAGCTTGTAAAGAAGCACTCACAGCACAGCAGAAGGCTGTAGAACTCCAAAGATGGAAATTAGAGGAAGAAAGGAGATTGGAAGAGGCAAGAATGGCTGAAGAAAATGCATTGGCTGTTGCAGAAAAGGAAAAAGCAAAATCAAAAGCAGCTATTGAGACTGCTGAAGCACAAAAGAGGATTGCGGAAATTGAAGCACAAAAGAGAATTAGTGCAGAAATGAAAGCTTTAAGAGAAGCAGAAGAGAAAAGAAAAGTAGTTGATACTTTGTCAAACAAAGATGTGAGGTATAGAAGATATGCAATTGAAGATATTGAAGCTGCAACGAATTTTTTCGCGGACTCTCTTAAGATTGGAGAAGGTGGTTATGGTCCAGTTTATAAATGTCTTCTAGACCATACACCTGTCGCGGTTAAAGTTCTTCGTCCTGATGCACAACAAGGAAGGTCGCAATTTCAACGAGAGGTTGAGGTATTGAGTTGCATAAGGCATCCTAACATGGTTCTTCTCCTAGGAGCCTGTCCGGAATATGGCTGCCTAGTTTACGAGCACATGGCGAATGGAAGTTTGGACGATTGTCTGTTTTGTAGAGGAAACTCTCCACCACTACCTTGGCAGCTAAGGTTCAAAATTGCAGCTGAAATTGGAACAGGCTTACTCTTCCTCCACCAAACAAAACCTGAGCCACTAGTACATAGAGACCTTAAACCGGCAAACATCTTGCTCGACCGCAACTACGTCGCAAAAATAAGTGATGTTGGTTTGGCAAGACTAGTACCTCCGTCTGTAGCAGACAACGTGACGCAATACCGAATGACATCGGCTGCGGGAACATTCTGTTACATAGATCCTGAGTACCAACAGACAGGAATGTTGGGAGTGAAATCTGATATATACTCACTTGGGATAATTTTCTTGCAAATTTTGACAGCACGGCCACCGATGGGATTGACACATCATGTTGGTAGAGCAATTGAGAGGGGAACATTCGATGAGATGTTGGATCCAAGAGTGACAGATTGGCCAGCTGAAGAGGCTCTTGGATTTGCTAAGATGGCTATAAAATGTGCCGAGTTACGGAGGAAAGATAGACCTGATCTTGGTAAAGAGGTTATGCCTGAACTTAATAGGTTAAGAGAACTGGCTGAAAGTAATGATCACCATTCTATGTTTAGTGGATTTATGAGTCCATCTACCCAGAGCCAAGTCTCTCTTCAAATGGATGGATCAAGTTCTCCACTTCCTTATTCTGGGGATAGCACAAGAAATACATCAAGCCCTCTTTGA | 2343 | 0.4123 | MWLQKNQWDKKDGVSGIVAVAIDTDKGSQNALKWSIDHLISKGSTIVLIHVKVKPTPSSMSTPRAGMIEQCTMVPKEPDEITKEIFRPYRVFCARKDIHCKDIVLEHGDVSKALIEYTSQSAIEHLVIGSSNKNGFLKRFKVIDIPGTVSKGAPDFCTVYIVGKGKIQSMRSASRPAPAFSPLQTQLSQSSSRSDHSEPRMPMAVKAPERRSFEGPPRRSQDGADSFRSPFTRRRPNDKSYGELPMPDSDISFVSSGRPSTDRLFPSVFNHNYNSESSFSNPRLSYSSDTDGNYSFESINYGRRSIDIANPDFSSFSHDSDGLSSSASNVDDVEAEMRRLKLELKQTMEMYSTACKEALTAQQKAVELQRWKLEEERRLEEARMAEENALAVAEKEKAKSKAAIETAEAQKRIAEIEAQKRISAEMKALREAEEKRKVVDTLSNKDVRYRRYAIEDIEAATNFFADSLKIGEGGYGPVYKCLLDHTPVAVKVLRPDAQQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHMANGSLDDCLFCRGNSPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVGRAIERGTFDEMLDPRVTDWPAEEALGFAKMAIKCAELRRKDRPDLGKEVMPELNRLRELAESNDHHSMFSGFMSPSTQSQVSLQMDGSSSPLPYSGDSTRNTSSPL | 780 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g00836 | 780 | Gene3D | Transferase(Phosphotransferase) domain 1 | 537 | 747 | - | - | |
Trre2g00836 | 780 | FunFam | U-box domain-containing protein 51 | 537 | 737 | - | - | |
Trre2g00836 | 780 | PANTHER | OS02G0152300 PROTEIN | 17 | 758 | - | - | |
Trre2g00836 | 780 | ProSiteProfiles | Protein kinase domain profile. | 464 | 743 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00836 | 780 | Pfam | Protein kinase domain | 467 | 672 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00836 | 780 | SUPERFAMILY | Protein kinase-like (PK-like) | 448 | 719 | IPR011009 | - | |
Trre2g00836 | 780 | Gene3D | Phosphorylase Kinase; domain 1 | 441 | 536 | - | - | |
Trre2g00836 | 780 | CDD | STKc_IRAK | 470 | 730 | - | - | |
Trre2g00836 | 780 | CDD | STK_N | 17 | 165 | - | - | |
Trre2g00836 | 780 | Coils | Coil | 323 | 350 | - | - | |
Trre2g00836 | 780 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 18 | 140 | - | - | |
Trre2g00836 | 780 | Coils | Coil | 356 | 435 | - | - | |
Trre2g00836 | 780 | MobiDBLite | consensus disorder prediction | 741 | 780 | - | - | |
Trre2g00836 | 780 | SMART | serkin_6 | 464 | 724 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00836 | 780 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 582 | 594 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g00836 | 780 | Pfam | Universal stress protein family | 18 | 139 | IPR006016 | - | |
Trre2g00836 | 780 | Gene3D | HUPs | 17 | 162 | IPR014729 | - | |
Trre2g00836 | 780 | MobiDBLite | consensus disorder prediction | 173 | 257 | - | - | |
Trre2g00836 | 780 | MobiDBLite | consensus disorder prediction | 174 | 197 | - | - | |
Trre2g00836 | 780 | MobiDBLite | consensus disorder prediction | 199 | 218 | - | - | |
Trre2g00836 | 780 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 436 | 536 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g00836 | Trre-Chr2 | 6572914 | 6577380 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g00836 | 1 | 757 | Receptor kinase-like Gene Family | AT1G78940 | 56.978 | 0.0 | 810 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Trre2g00836 | Pkinase | 2.7e-38 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g00836 | - | - | gmx:100779981 | 1122.46 |