Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00836 ATGTGGTTGCAAAAGAATCAATGGGACAAGAAGGATGGGGTGAGTGGAATAGTGGCAGTGGCAATAGATACAGATAAAGGGAGCCAAAATGCACTTAAATGGTCCATTGATCATCTCATTTCAAAAGGCTCAACTATTGTTCTCATTCATGTCAAGGTTAAACCAACACCATCATCTATGTCAACCCCAAGGGCAGGGATGATTGAGCAATGCACAATGGTGCCTAAAGAACCTGATGAAATAACCAAAGAAATTTTCCGTCCATATCGCGTCTTTTGTGCGCGCAAAGATATACATTGCAAGGACATTGTACTAGAACATGGAGATGTATCCAAAGCATTAATTGAATATACTTCTCAATCAGCAATTGAGCATTTGGTTATAGGCTCTTCCAATAAAAATGGTTTTCTCAAAAGATTCAAGGTGATAGATATTCCAGGAACTGTATCTAAAGGGGCACCAGATTTTTGTACAGTATATATTGTTGGTAAAGGAAAAATTCAATCTATGAGATCTGCTTCTAGACCTGCTCCTGCATTTTCACCTCTACAAACTCAACTTAGTCAATCTAGTAGTAGGTCAGATCATTCAGAACCTCGTATGCCGATGGCAGTTAAAGCACCTGAGAGGAGATCATTTGAGGGACCGCCTCGTAGATCCCAAGATGGAGCAGATTCATTCAGGTCACCGTTCACTCGGAGACGTCCAAATGACAAGTCATATGGAGAACTTCCTATGCCAGATAGTGACATATCCTTTGTAAGCTCAGGAAGACCTAGTACAGATCGTTTATTCCCTTCAGTATTTAACCACAACTACAATTCAGAGTCAAGTTTTTCCAATCCTAGGCTATCATATAGTTCTGATACTGATGGAAACTATAGCTTTGAATCAATAAATTATGGAAGAAGGTCTATTGATATTGCCAATCCTGATTTCTCATCTTTCTCACATGATAGTGATGGACTTTCGTCTTCTGCATCAAATGTGGATGATGTGGAAGCTGAAATGAGGAGGCTGAAATTGGAGTTAAAGCAAACAATGGAAATGTATAGCACAGCTTGTAAAGAAGCACTCACAGCACAGCAGAAGGCTGTAGAACTCCAAAGATGGAAATTAGAGGAAGAAAGGAGATTGGAAGAGGCAAGAATGGCTGAAGAAAATGCATTGGCTGTTGCAGAAAAGGAAAAAGCAAAATCAAAAGCAGCTATTGAGACTGCTGAAGCACAAAAGAGGATTGCGGAAATTGAAGCACAAAAGAGAATTAGTGCAGAAATGAAAGCTTTAAGAGAAGCAGAAGAGAAAAGAAAAGTAGTTGATACTTTGTCAAACAAAGATGTGAGGTATAGAAGATATGCAATTGAAGATATTGAAGCTGCAACGAATTTTTTCGCGGACTCTCTTAAGATTGGAGAAGGTGGTTATGGTCCAGTTTATAAATGTCTTCTAGACCATACACCTGTCGCGGTTAAAGTTCTTCGTCCTGATGCACAACAAGGAAGGTCGCAATTTCAACGAGAGGTTGAGGTATTGAGTTGCATAAGGCATCCTAACATGGTTCTTCTCCTAGGAGCCTGTCCGGAATATGGCTGCCTAGTTTACGAGCACATGGCGAATGGAAGTTTGGACGATTGTCTGTTTTGTAGAGGAAACTCTCCACCACTACCTTGGCAGCTAAGGTTCAAAATTGCAGCTGAAATTGGAACAGGCTTACTCTTCCTCCACCAAACAAAACCTGAGCCACTAGTACATAGAGACCTTAAACCGGCAAACATCTTGCTCGACCGCAACTACGTCGCAAAAATAAGTGATGTTGGTTTGGCAAGACTAGTACCTCCGTCTGTAGCAGACAACGTGACGCAATACCGAATGACATCGGCTGCGGGAACATTCTGTTACATAGATCCTGAGTACCAACAGACAGGAATGTTGGGAGTGAAATCTGATATATACTCACTTGGGATAATTTTCTTGCAAATTTTGACAGCACGGCCACCGATGGGATTGACACATCATGTTGGTAGAGCAATTGAGAGGGGAACATTCGATGAGATGTTGGATCCAAGAGTGACAGATTGGCCAGCTGAAGAGGCTCTTGGATTTGCTAAGATGGCTATAAAATGTGCCGAGTTACGGAGGAAAGATAGACCTGATCTTGGTAAAGAGGTTATGCCTGAACTTAATAGGTTAAGAGAACTGGCTGAAAGTAATGATCACCATTCTATGTTTAGTGGATTTATGAGTCCATCTACCCAGAGCCAAGTCTCTCTTCAAATGGATGGATCAAGTTCTCCACTTCCTTATTCTGGGGATAGCACAAGAAATACATCAAGCCCTCTTTGA 2343 0.4123 MWLQKNQWDKKDGVSGIVAVAIDTDKGSQNALKWSIDHLISKGSTIVLIHVKVKPTPSSMSTPRAGMIEQCTMVPKEPDEITKEIFRPYRVFCARKDIHCKDIVLEHGDVSKALIEYTSQSAIEHLVIGSSNKNGFLKRFKVIDIPGTVSKGAPDFCTVYIVGKGKIQSMRSASRPAPAFSPLQTQLSQSSSRSDHSEPRMPMAVKAPERRSFEGPPRRSQDGADSFRSPFTRRRPNDKSYGELPMPDSDISFVSSGRPSTDRLFPSVFNHNYNSESSFSNPRLSYSSDTDGNYSFESINYGRRSIDIANPDFSSFSHDSDGLSSSASNVDDVEAEMRRLKLELKQTMEMYSTACKEALTAQQKAVELQRWKLEEERRLEEARMAEENALAVAEKEKAKSKAAIETAEAQKRIAEIEAQKRISAEMKALREAEEKRKVVDTLSNKDVRYRRYAIEDIEAATNFFADSLKIGEGGYGPVYKCLLDHTPVAVKVLRPDAQQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHMANGSLDDCLFCRGNSPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVGRAIERGTFDEMLDPRVTDWPAEEALGFAKMAIKCAELRRKDRPDLGKEVMPELNRLRELAESNDHHSMFSGFMSPSTQSQVSLQMDGSSSPLPYSGDSTRNTSSPL 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00836 780 Gene3D Transferase(Phosphotransferase) domain 1 537 747 - -
Trre2g00836 780 FunFam U-box domain-containing protein 51 537 737 - -
Trre2g00836 780 PANTHER OS02G0152300 PROTEIN 17 758 - -
Trre2g00836 780 ProSiteProfiles Protein kinase domain profile. 464 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00836 780 Pfam Protein kinase domain 467 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00836 780 SUPERFAMILY Protein kinase-like (PK-like) 448 719 IPR011009 -
Trre2g00836 780 Gene3D Phosphorylase Kinase; domain 1 441 536 - -
Trre2g00836 780 CDD STKc_IRAK 470 730 - -
Trre2g00836 780 CDD STK_N 17 165 - -
Trre2g00836 780 Coils Coil 323 350 - -
Trre2g00836 780 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 140 - -
Trre2g00836 780 Coils Coil 356 435 - -
Trre2g00836 780 MobiDBLite consensus disorder prediction 741 780 - -
Trre2g00836 780 SMART serkin_6 464 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00836 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Trre2g00836 780 Pfam Universal stress protein family 18 139 IPR006016 -
Trre2g00836 780 Gene3D HUPs 17 162 IPR014729 -
Trre2g00836 780 MobiDBLite consensus disorder prediction 173 257 - -
Trre2g00836 780 MobiDBLite consensus disorder prediction 174 197 - -
Trre2g00836 780 MobiDBLite consensus disorder prediction 199 218 - -
Trre2g00836 780 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 436 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00836 Trre-Chr2 6572914 6577380 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00836 1 757 Receptor kinase-like Gene Family AT1G78940 56.978 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trre2g00836 Pkinase 2.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00836 - - gmx:100779981 1122.46