Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g00835 | ATGTGGTTGCAAAAGAATCAATGGGACAAGAAGGATGGGGTGAGTGGAATAGTGGCAGTGGCAATAGATACAGATAAAGGGAGCCAAAATGCACTTAAATGGTCCATTGATCATCTCATTTCAAAAGGCTCAACTATTGTTCTCATTCATGTCAAGGTTAAACCAACACCATCATCTATGTCAACCCCAAGGGCAGGGATGATTGAGCAATGCACAATGGTGCCTAAAGAACCTGATGAAATAACCAAAGAAATTTTCCGTCCATATCGCGTCTTTTGTGCGCGCAAAGATATACATTGCAAGGACATTGTACTAGAACATGGAGATGTATCCAAAGCATTAATTGAATATACTTCTCAATCAGCAATTGAGCATTTGGTTATAGGCTCTTCCAATAAAAATGGTTTTCTCAAATTCAAGGTGATAGATATTCCAGGAACTGTATCTAAAGGGGCACCAGATTTTTGTACAGTATATATTGTTGGTAAAGGAAAAATTCAATCTATGAGATCTGCTTCTAGACCTGCTCCTGCATTTTCACCTCTACAAACTCAACTTAGTCAATCTAGTAGTAGGTCAGATCATTCAGAACCTCGTATGCCGATGGCAGTTAAAGCACCTGAGAGGAGATCATTTGAGGGACCGCCTCGTAGATCCCAAGATGGAGCAGATTCATTCAGGTCACCGTTCACTCGGAGACGTCCAAATGACAAGTCATATGGAGAACTTCCTATGCCAGATAGTGACATATCCTTTGTAAGCTCAGGAAGACCTAGTACAGATCGTTTATTCCCTTCAGTATTTAACCACAACTACAATTCAGAGTCAAGTTTTTCCAATCCTAGGCTATCATATAGTTCTGATACTGATGGAAACTATAGCTTTGAATCAATAAATTATGGAAGAAGGTCTATTGATATTGCCAATCCTGATTTCTCATCTTTCTCACATGATAGTGATGGACTTTCGTCTTCTGCATCAAATGTGGATGATGTGGAAGCTGAAATGAGGAGGCTGAAATTGGAGTTAAAGCAAACAATGGAAATGTATAGCACAGCTTGTAAAGAAGCACTCACAGCACAGCAGAAGGCTGTAGAACTCCAAAGATGGAAATTAGAGGAAGAAAGGAGATTGGAAGAGGCAAGAATGGCTGAAGAAAATGCATTGGCTGTTGCAGAAAAGGAAAAAGCAAAATCAAAAGCAGCTATTGAGACTGCTGAAGCACAAAAGAGGATTGCGGAAATTGAAGCACAAAAGAGAATTAGTGCAGAAATGAAAGCTTTAAGAGAAGCAGAAGAGAAAAGAAAAGTAGTTGATACTTTGTCAAACAAAGATGTGAGGTATAGAAGATATGCAATTGAAGATATTGAAGCTGCAACGAATTTTTTCGCGGACTCTCTTAAGATTGGAGAAGGTGGTTATGGTCCAGTTTATAAATGTCTTCTAGACCATACACCTGTCGCGGTTAAAGTTCTTCGTCCTGATGCACAACAAGGAAGGTCGCAATTTCAACGAGAGGTTGAGGTATTGAGTTGCATAAGGCATCCTAACATGGTTCTTCTCCTAGGAGCCTGTCCGGAATATGGCTGCCTAGTTTACGAGCACATGGCGAATGGAAGTTTGGACGATTGTCTGTTTTGTAGAGGAAACTCTCCACCACTACCTTGGCAGCTAAGGTTCAAAATTGCAGCTGAAATTGGAACAGGCTTACTCTTCCTCCACCAAACAAAACCTGAGCCACTAGTACATAGAGACCTTAAACCGGCAAACATCTTGCTCGACCGCAACTACGTCGCAAAAATAAGTGATGTTGGTTTGGCAAGACTAGTACCTCCGTCTGTAGCAGACAACGTGACGCAATACCGAATGACATCGGCTGCGGGAACATTCTGTTACATAGATCCTGAGTACCAACAGACAGGAATGTTGGGAGTGAAATCTGATATATACTCACTTGGGATAATTTTCTTGCAAATTTTGACAGCACGGCCACCGATGGGATTGACACATCATGTTGGTAGAGCAATTGAGAGGGGAACATTCGATGAGATGTTGGATCCAAGAGTGACAGATTGGCCAGCTGAAGAGGCTCTTGGATTTGCTAAGATGGCTATAAAATGTGCCGAGTTACGGAGGAAAGATAGACCTGATCTTGGTAAAGAGGTTATGCCTGAACTTAATAGGTTAAGAGAACTGGCTGAAAGTAATGATCACCATTCTATGTTTAGTGGATTTATGAGTCCATCTACCCAGAGCCAAGTCTCTCTTCAAATGGATGGATCAAGTTCTCCACTTCCTTATTCTGGGGATAGCACAAGAAATACATCAAGCCCTCTTTGA | 2340 | 0.4124 | MWLQKNQWDKKDGVSGIVAVAIDTDKGSQNALKWSIDHLISKGSTIVLIHVKVKPTPSSMSTPRAGMIEQCTMVPKEPDEITKEIFRPYRVFCARKDIHCKDIVLEHGDVSKALIEYTSQSAIEHLVIGSSNKNGFLKFKVIDIPGTVSKGAPDFCTVYIVGKGKIQSMRSASRPAPAFSPLQTQLSQSSSRSDHSEPRMPMAVKAPERRSFEGPPRRSQDGADSFRSPFTRRRPNDKSYGELPMPDSDISFVSSGRPSTDRLFPSVFNHNYNSESSFSNPRLSYSSDTDGNYSFESINYGRRSIDIANPDFSSFSHDSDGLSSSASNVDDVEAEMRRLKLELKQTMEMYSTACKEALTAQQKAVELQRWKLEEERRLEEARMAEENALAVAEKEKAKSKAAIETAEAQKRIAEIEAQKRISAEMKALREAEEKRKVVDTLSNKDVRYRRYAIEDIEAATNFFADSLKIGEGGYGPVYKCLLDHTPVAVKVLRPDAQQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHMANGSLDDCLFCRGNSPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVGRAIERGTFDEMLDPRVTDWPAEEALGFAKMAIKCAELRRKDRPDLGKEVMPELNRLRELAESNDHHSMFSGFMSPSTQSQVSLQMDGSSSPLPYSGDSTRNTSSPL | 779 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g00835 | 779 | Gene3D | HUPs | 17 | 161 | IPR014729 | - | |
Trre2g00835 | 779 | SUPERFAMILY | Protein kinase-like (PK-like) | 447 | 718 | IPR011009 | - | |
Trre2g00835 | 779 | ProSiteProfiles | Protein kinase domain profile. | 463 | 742 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00835 | 779 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 581 | 593 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g00835 | 779 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 435 | 535 | - | - | |
Trre2g00835 | 779 | MobiDBLite | consensus disorder prediction | 172 | 256 | - | - | |
Trre2g00835 | 779 | Gene3D | Transferase(Phosphotransferase) domain 1 | 536 | 746 | - | - | |
Trre2g00835 | 779 | MobiDBLite | consensus disorder prediction | 173 | 196 | - | - | |
Trre2g00835 | 779 | FunFam | U-box domain-containing protein 51 | 536 | 736 | - | - | |
Trre2g00835 | 779 | Gene3D | Phosphorylase Kinase; domain 1 | 440 | 535 | - | - | |
Trre2g00835 | 779 | Pfam | Universal stress protein family | 18 | 141 | IPR006016 | - | |
Trre2g00835 | 779 | MobiDBLite | consensus disorder prediction | 198 | 217 | - | - | |
Trre2g00835 | 779 | CDD | STKc_IRAK | 469 | 729 | - | - | |
Trre2g00835 | 779 | PANTHER | OS02G0152300 PROTEIN | 17 | 757 | - | - | |
Trre2g00835 | 779 | MobiDBLite | consensus disorder prediction | 740 | 779 | - | - | |
Trre2g00835 | 779 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 18 | 139 | - | - | |
Trre2g00835 | 779 | Pfam | Protein kinase domain | 466 | 671 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00835 | 779 | SMART | serkin_6 | 463 | 723 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00835 | 779 | Coils | Coil | 355 | 434 | - | - | |
Trre2g00835 | 779 | Coils | Coil | 322 | 349 | - | - | |
Trre2g00835 | 779 | CDD | STK_N | 17 | 164 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g00835 | Trre-Chr2 | 6572914 | 6577380 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g00835 | 1 | 756 | Receptor kinase-like Gene Family | AT1G78940 | 56.667 | 0.0 | 804 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Trre2g00835 | Pkinase | 2.7e-38 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g00835 | - | - | gmx:100779981 | 1125.92 |