Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00835 ATGTGGTTGCAAAAGAATCAATGGGACAAGAAGGATGGGGTGAGTGGAATAGTGGCAGTGGCAATAGATACAGATAAAGGGAGCCAAAATGCACTTAAATGGTCCATTGATCATCTCATTTCAAAAGGCTCAACTATTGTTCTCATTCATGTCAAGGTTAAACCAACACCATCATCTATGTCAACCCCAAGGGCAGGGATGATTGAGCAATGCACAATGGTGCCTAAAGAACCTGATGAAATAACCAAAGAAATTTTCCGTCCATATCGCGTCTTTTGTGCGCGCAAAGATATACATTGCAAGGACATTGTACTAGAACATGGAGATGTATCCAAAGCATTAATTGAATATACTTCTCAATCAGCAATTGAGCATTTGGTTATAGGCTCTTCCAATAAAAATGGTTTTCTCAAATTCAAGGTGATAGATATTCCAGGAACTGTATCTAAAGGGGCACCAGATTTTTGTACAGTATATATTGTTGGTAAAGGAAAAATTCAATCTATGAGATCTGCTTCTAGACCTGCTCCTGCATTTTCACCTCTACAAACTCAACTTAGTCAATCTAGTAGTAGGTCAGATCATTCAGAACCTCGTATGCCGATGGCAGTTAAAGCACCTGAGAGGAGATCATTTGAGGGACCGCCTCGTAGATCCCAAGATGGAGCAGATTCATTCAGGTCACCGTTCACTCGGAGACGTCCAAATGACAAGTCATATGGAGAACTTCCTATGCCAGATAGTGACATATCCTTTGTAAGCTCAGGAAGACCTAGTACAGATCGTTTATTCCCTTCAGTATTTAACCACAACTACAATTCAGAGTCAAGTTTTTCCAATCCTAGGCTATCATATAGTTCTGATACTGATGGAAACTATAGCTTTGAATCAATAAATTATGGAAGAAGGTCTATTGATATTGCCAATCCTGATTTCTCATCTTTCTCACATGATAGTGATGGACTTTCGTCTTCTGCATCAAATGTGGATGATGTGGAAGCTGAAATGAGGAGGCTGAAATTGGAGTTAAAGCAAACAATGGAAATGTATAGCACAGCTTGTAAAGAAGCACTCACAGCACAGCAGAAGGCTGTAGAACTCCAAAGATGGAAATTAGAGGAAGAAAGGAGATTGGAAGAGGCAAGAATGGCTGAAGAAAATGCATTGGCTGTTGCAGAAAAGGAAAAAGCAAAATCAAAAGCAGCTATTGAGACTGCTGAAGCACAAAAGAGGATTGCGGAAATTGAAGCACAAAAGAGAATTAGTGCAGAAATGAAAGCTTTAAGAGAAGCAGAAGAGAAAAGAAAAGTAGTTGATACTTTGTCAAACAAAGATGTGAGGTATAGAAGATATGCAATTGAAGATATTGAAGCTGCAACGAATTTTTTCGCGGACTCTCTTAAGATTGGAGAAGGTGGTTATGGTCCAGTTTATAAATGTCTTCTAGACCATACACCTGTCGCGGTTAAAGTTCTTCGTCCTGATGCACAACAAGGAAGGTCGCAATTTCAACGAGAGGTTGAGGTATTGAGTTGCATAAGGCATCCTAACATGGTTCTTCTCCTAGGAGCCTGTCCGGAATATGGCTGCCTAGTTTACGAGCACATGGCGAATGGAAGTTTGGACGATTGTCTGTTTTGTAGAGGAAACTCTCCACCACTACCTTGGCAGCTAAGGTTCAAAATTGCAGCTGAAATTGGAACAGGCTTACTCTTCCTCCACCAAACAAAACCTGAGCCACTAGTACATAGAGACCTTAAACCGGCAAACATCTTGCTCGACCGCAACTACGTCGCAAAAATAAGTGATGTTGGTTTGGCAAGACTAGTACCTCCGTCTGTAGCAGACAACGTGACGCAATACCGAATGACATCGGCTGCGGGAACATTCTGTTACATAGATCCTGAGTACCAACAGACAGGAATGTTGGGAGTGAAATCTGATATATACTCACTTGGGATAATTTTCTTGCAAATTTTGACAGCACGGCCACCGATGGGATTGACACATCATGTTGGTAGAGCAATTGAGAGGGGAACATTCGATGAGATGTTGGATCCAAGAGTGACAGATTGGCCAGCTGAAGAGGCTCTTGGATTTGCTAAGATGGCTATAAAATGTGCCGAGTTACGGAGGAAAGATAGACCTGATCTTGGTAAAGAGGTTATGCCTGAACTTAATAGGTTAAGAGAACTGGCTGAAAGTAATGATCACCATTCTATGTTTAGTGGATTTATGAGTCCATCTACCCAGAGCCAAGTCTCTCTTCAAATGGATGGATCAAGTTCTCCACTTCCTTATTCTGGGGATAGCACAAGAAATACATCAAGCCCTCTTTGA 2340 0.4124 MWLQKNQWDKKDGVSGIVAVAIDTDKGSQNALKWSIDHLISKGSTIVLIHVKVKPTPSSMSTPRAGMIEQCTMVPKEPDEITKEIFRPYRVFCARKDIHCKDIVLEHGDVSKALIEYTSQSAIEHLVIGSSNKNGFLKFKVIDIPGTVSKGAPDFCTVYIVGKGKIQSMRSASRPAPAFSPLQTQLSQSSSRSDHSEPRMPMAVKAPERRSFEGPPRRSQDGADSFRSPFTRRRPNDKSYGELPMPDSDISFVSSGRPSTDRLFPSVFNHNYNSESSFSNPRLSYSSDTDGNYSFESINYGRRSIDIANPDFSSFSHDSDGLSSSASNVDDVEAEMRRLKLELKQTMEMYSTACKEALTAQQKAVELQRWKLEEERRLEEARMAEENALAVAEKEKAKSKAAIETAEAQKRIAEIEAQKRISAEMKALREAEEKRKVVDTLSNKDVRYRRYAIEDIEAATNFFADSLKIGEGGYGPVYKCLLDHTPVAVKVLRPDAQQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHMANGSLDDCLFCRGNSPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVGRAIERGTFDEMLDPRVTDWPAEEALGFAKMAIKCAELRRKDRPDLGKEVMPELNRLRELAESNDHHSMFSGFMSPSTQSQVSLQMDGSSSPLPYSGDSTRNTSSPL 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00835 779 Gene3D HUPs 17 161 IPR014729 -
Trre2g00835 779 SUPERFAMILY Protein kinase-like (PK-like) 447 718 IPR011009 -
Trre2g00835 779 ProSiteProfiles Protein kinase domain profile. 463 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00835 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Trre2g00835 779 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 435 535 - -
Trre2g00835 779 MobiDBLite consensus disorder prediction 172 256 - -
Trre2g00835 779 Gene3D Transferase(Phosphotransferase) domain 1 536 746 - -
Trre2g00835 779 MobiDBLite consensus disorder prediction 173 196 - -
Trre2g00835 779 FunFam U-box domain-containing protein 51 536 736 - -
Trre2g00835 779 Gene3D Phosphorylase Kinase; domain 1 440 535 - -
Trre2g00835 779 Pfam Universal stress protein family 18 141 IPR006016 -
Trre2g00835 779 MobiDBLite consensus disorder prediction 198 217 - -
Trre2g00835 779 CDD STKc_IRAK 469 729 - -
Trre2g00835 779 PANTHER OS02G0152300 PROTEIN 17 757 - -
Trre2g00835 779 MobiDBLite consensus disorder prediction 740 779 - -
Trre2g00835 779 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 139 - -
Trre2g00835 779 Pfam Protein kinase domain 466 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00835 779 SMART serkin_6 463 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00835 779 Coils Coil 355 434 - -
Trre2g00835 779 Coils Coil 322 349 - -
Trre2g00835 779 CDD STK_N 17 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00835 Trre-Chr2 6572914 6577380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00835 1 756 Receptor kinase-like Gene Family AT1G78940 56.667 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trre2g00835 Pkinase 2.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00835 - - gmx:100779981 1125.92