Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00827 ATGGCTGTGGAACTCATGGGGTTCCCAAAACTAGATGAACAAAAAGCCATACAAGAGGCTGCATCAGAAGGTCTCAAAGGTATGGAACACCTGATCCTAACCCTTTCTAATCAACCAACTCAATTAAACACACAACTAACTGATCACACCGTTTCTAAGTTCAAAAAACTTATCTCTTTACTTAACCGAACCGGTCATGCTCGGTTCAGACGCGCCCCGGTTCAAACCTCTTCATCATCATCACCACCGGTTCAAACCTTTTCATCACCGGTTCAACTTCAACCAACACCGGTTCAAATTCATCCAACACCGGTTCAAACCGTTTCTCAACCGAAACAGTTTCTTTCTCCGGCACCGGCACTTTCTGTGACTCCGATTTCAACGCGTCACGCGCCGGCTACCTTTGTTCAACCGCAATCACTATCACATACTCTAACGCTCGATTTCACGAAACCGAACGACGTCGTTTTGAGCTCAAATGCGAAAAATAACTCTATGGTTGAACTTGAATTCTCGAAGGATACAGCTACGTTCAGCGTTTCGAATTCAACTTCGTCGTTTATGTCATCTGCCATCACCGGTGACGGAAGTGTCAACGGTAAACAAGGTTCGTCGATTTTTCTGACTCCGGCGGCAACACCAGCTATTTCCGGTGGAAAACCACCGCTCTTGTCTGGACCGTCTAAGAAACGGTGTCACGATCATGGTGAACACTCCGATGACGTTTCTGGCTCAAATAAGTGCCACTGTGTTAAGAGAAGAAAAAATAGGGTGAAGAGAACAGTGAGAGTACCAGCAATAAGTTCAAAGACAGCCGATATACCGGCAGATGAGTACTCATGGAGAAAATACGGTCAAAAACCGATCAAAGGATCACCATATCCACGAGGCTATTACAAGTGTAGCACAGTGAGAGGGTGCCCAGCAAGGAAACACGTGGAGCGTGCACCAGATGATCCAACGATGCTGATTGTAACATATGAAGGGGAACACAGACACGCAATTCAAGCCGCGATGCAGGAGAACGCAGCCGGGATTGTGGGTTTGGTATTTAAGTCAACGTAA 1065 0.4638 MAVELMGFPKLDEQKAIQEAASEGLKGMEHLILTLSNQPTQLNTQLTDHTVSKFKKLISLLNRTGHARFRRAPVQTSSSSSPPVQTFSSPVQLQPTPVQIHPTPVQTVSQPKQFLSPAPALSVTPISTRHAPATFVQPQSLSHTLTLDFTKPNDVVLSSNAKNNSMVELEFSKDTATFSVSNSTSSFMSSAITGDGSVNGKQGSSIFLTPAATPAISGGKPPLLSGPSKKRCHDHGEHSDDVSGSNKCHCVKRRKNRVKRTVRVPAISSKTADIPADEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPTMLIVTYEGEHRHAIQAAMQENAAGIVGLVFKST 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00827 354 ProSiteProfiles WRKY domain profile. 270 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre2g00827 354 Gene3D WRKY domain 258 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre2g00827 354 FunFam WRKY transcription factor 65 259 336 - -
Trre2g00827 354 MobiDBLite consensus disorder prediction 71 90 - -
Trre2g00827 354 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 339 IPR044810 GO:0003700
Trre2g00827 354 SMART WRKY_cls 275 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre2g00827 354 Pfam WRKY DNA -binding domain 277 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre2g00827 354 MobiDBLite consensus disorder prediction 217 247 - -
Trre2g00827 354 Pfam Plant zinc cluster domain 229 273 IPR018872 -
Trre2g00827 354 SUPERFAMILY WRKY DNA-binding domain 271 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre2g00827 354 MobiDBLite consensus disorder prediction 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00827 Trre-Chr2 6515451 6518016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00827 1 353 WRKY Transcription Factor Family AT2G24570 56.749 4.60e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre2g00827 WRKY 8.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00827 - - tpra:123902288 618.616