Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00826 ATGGCTGGTTCTAGTTCTTGTTCTATTTCTGGTTCTGGTTCTGTTAGTTGTAAGAGTGATAGTGGAATTGAGAATTTGATTTGTGCTAGTAAATCATTGAAACTTAGCTTAGAGAAATCAAAGAGTGTTGGATTAGCATTAGAGAAAGCAGGGCCAAGGTTAGATGAGATTAGGGTAAGGTTACCTTGGCTTGAATCCGCGGTTAGGCCGATTAGAGCTGAGAAGGATGCTCTTGTGGCGGTTGGAGGTCATATTAATAGGGCTGTTGGTCCTGCGGCTGCTGTGTTGAAGGTTTTCGATGCAGTTCATGGGCTTGAGAAGTCTTTGTTGTCGGATCCACGGATTGATTTACCGGGTTATTTGTCGGTTTTGAAGCGTCTTGAGGAGGCGTTGAGGTTCTTGGGAGATAATTGTGGGTTGGCTATTCAGTGGTTGGATGATATAGTTGAGTATTTAGAAGATAATTCAGTTGCTGATCAGGTTTATCTTAAGAATTTGAAGAAGGAGTTGGAGAATCTTAAGGGATCGCAGAATGGTGATTTGGATGGTGGTTTGTTAGACGCTGCTTTGGATAAATTAGAGAATGAGTTCAGGTTGCTTTTAACTGATAACAGTGTGCCGCTTCCTATGTCGTCTGATTCTCTTGGTGATCAGCCTTGCATTGCACCTTCGCCTTTGCCTGTTTCTGTTGTTCATAAATTGCAGGCTATTCTTGGTAGGTTGAGAGCTAATGATAGACTTGATAAATGTGTGTCGATTTATGTTGAAGTTAGAAGTTCTAATGTGAGGGCAAGTTTGCAGGCCCTGAATTTGGATTACCTCGAGATCTCGGTGTCTGAGTTCAATGATGTGCAGAGTATAGAGGTGTATATAGCTCAGTGGGGAAAGCATTTGGAGTTTGCGGTGAAGCATTTGTTTGAGGCTGAGTATAAGCTTTGTAATGATGTGTTTGAGAGGCTTGGACTCGATGTGTGGATGGGTTGCTTTTCGAAGATAGCTGCACAGGCTGGTATACTTGCATTTCTTCAGTTTGGTAAGACTGTTACGGAGAGTAAGAAAGATCCCATCAAGCTTTTGAAGTTGTTGGATATTTTTGCATCGTTGAACAAATTGAGACTTGATTTCAACCGTCTTTTCGGGGGTGATGCGTGTGTCGAAATCCAAAATTTAACTAGGGAACTTATTAAGAGTGTGATTGATGGTGCAGCAGAAATTTTCTGGGAACTTTTGGTTCAGGTAGAGTTACAAAGGCAGAACCCTCCTCCTCCAGATGGAAGTGTTCCGAGATTGGTGAGCTTTATCACTGATTACTGCAATAAACTCTTGGGGGACGACTATAAGCCTATACTGACTCAAGTCCTGATCATTCACCGAAGCTGGAAGCGTCAAAGTTTTCAGGAGAAGCTTCTTGTTAATGAGATTTTGAACATATTGAAAGCCGTTGAATTAAATTTGGAGACATGGATCAAGGCTTATGATGATCCTATGTTGTCGAGCTTTTTCGCCATGAACAATCACTGGCATCTGTTCAAGCATTTGAAAGGGACAAAGCTTGGAGATCTTTTAGGGGATTCTTCGTTAAAGGAACATGAACAGTATAAGGACTATTACTCCACAGTATTCTTGCGAGATAGTTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGGCTGATTCTTTTCTCAGGAGGGCGTGCCACTGCTCGTGATTTGGTCAAGAAAAGATTGAAAAAGTTCAACGAAGTTTTTGATGATATGTATTCAAAGCAGTCAGGTTGGATCATGGTTGAACGAGATCTGAGAGAGAAGACTTGTCAGCATATAGTGCAGGCTGTGGTGCCTGTTTACCGGAGTTACATGCAGAATTACGGTCCCTTGGTCGAGCAAGATGCTAGCTCTAATAAATATGCAAAATACACAGTACAGAAGCTCGAAGAAATGCTTTTGTGTCTTTACCGACCGAAGCCTGCAAGACACGGCAGCTTAAGAAGTCCGCAGCTTAGTGGAAAGTACGGGAATGGAATACCTGATCTTCGTCGAACGGCTTCTGCAGTTGTGTAG 2061 0.4246 MAGSSSCSISGSGSVSCKSDSGIENLICASKSLKLSLEKSKSVGLALEKAGPRLDEIRVRLPWLESAVRPIRAEKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRIDLPGYLSVLKRLEEALRFLGDNCGLAIQWLDDIVEYLEDNSVADQVYLKNLKKELENLKGSQNGDLDGGLLDAALDKLENEFRLLLTDNSVPLPMSSDSLGDQPCIAPSPLPVSVVHKLQAILGRLRANDRLDKCVSIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEVYIAQWGKHLEFAVKHLFEAEYKLCNDVFERLGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGDACVEIQNLTRELIKSVIDGAAEIFWELLVQVELQRQNPPPPDGSVPRLVSFITDYCNKLLGDDYKPILTQVLIIHRSWKRQSFQEKLLVNEILNILKAVELNLETWIKAYDDPMLSSFFAMNNHWHLFKHLKGTKLGDLLGDSSLKEHEQYKDYYSTVFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDDMYSKQSGWIMVERDLREKTCQHIVQAVVPVYRSYMQNYGPLVEQDASSNKYAKYTVQKLEEMLLCLYRPKPARHGSLRSPQLSGKYGNGIPDLRRTASAVV 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00826 686 FunFam Exocyst subunit Exo70 family protein 145 658 - -
Trre2g00826 686 SUPERFAMILY Cullin repeat-like 95 652 IPR016159 -
Trre2g00826 686 MobiDBLite consensus disorder prediction 1 20 - -
Trre2g00826 686 PANTHER EXOCYST COMPLEX PROTEIN EXO70 91 648 IPR004140 GO:0000145|GO:0006887
Trre2g00826 686 Gene3D Exocyst complex component Exo70 141 659 - -
Trre2g00826 686 Pfam Exo70 exocyst complex subunit 293 648 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00826 Trre-Chr2 6500238 6502298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00826 16 686 EXO70 exocyst subunit family AT4G31540 74.269 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00826 K07195 - gmx:100796139 1142.49