Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00803 ATGCTGGGGTTAAGCTATTTGAAGGTGAGGGAAAGATATATAACAGATCCAAATGAAGTTGAGGTGACACAATTGGATGGCACTAAATTTTCCTACACAGCAAAGCATATTTTGATTGCAACTGTGGCAGCAGGGCTCAGCGTCCAAATATTCCTGGCCAGCTCTGCAGTGGAATTTATGAAAGTTCAATTGGAGCATGTGCTCAACTTGTATTTGCACCTATTTGACGAATCCTTTGCGGATGACGCCCTTTTGGTGCCTTCTGGTTTTCGTGTTATTCCTTTGGATCCCAAATCAGACGGTCCAACTTCAAGGATATTGGATTTGACATCAACACTTGGATCTAGTAATAGTGCTCGTGCAGCCGGTGAAGGTGATGCAAATGGATACAACCTTAGCTCGGTTCTTACGATTGCATTTCAATTTACCTTTGAGAATCATTTGCACGATAACGGGGCTGCTATGGCTCGTTAG 474 0.4325 MLGLSYLKVRERYITDPNEVEVTQLDGTKFSYTAKHILIATVAAGLSVQIFLASSAVEFMKVQLEHVLNLYLHLFDESFADDALLVPSGFRVIPLDPKSDGPTSRILDLTSTLGSSNSARAAGEGDANGYNLSSVLTIAFQFTFENHLHDNGAAMAR 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00803 157 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 61 157 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00803 Trre-Chr2 6291355 6292363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00803 20 157 Homeobox Transcription Factor Family AT2G34710 42.069 1.14e-24 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00803 K09338 - gmx:100779499 122.864