Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00771 ATGCATCCATTAATAATGCTTGCTGCATTATTCCTGTTGGTAGAAGCAGTTGCATCTTTGGCCAGAGAAGCAGTTGCATCTGATCAACTCCAACAAGTCCTACCAGGCTGCAATAATACTTGTGGAGATGTACTAGTTCCATATCCATTTGGCATGGGACATTCAACAACACAAGATCATACACCATGTTACATGGATTCTAAATTTGAGCTCACTTGTAGAAACTCAAAATTAATCTATGATAAAAATATCCTAGTCCTAGCCCCAAAGTCAAATGAAAACAAATTCATAACCGTTAGTTGCGACGGTTATGGAATTCTCAACAGTAATTTCAAGGGTGCAACTTATTCAACAGGGTGCTTAACAAGATGTGATAATAATTATGACCCTAAAATGGTAATTGGGAATAACACTGGAAAATGCACAGGTTTAGGGTGTTGCCAAGTGGATATTCCTCCACTTATGAAAAATTTCACTATACAAACATTTAAATTCCCAACTTCTACATCTCAGAAAGGTTGTAGCTATTCCTTTATTGCAAAACAAGGATACTATAATTTTTCTGTAGAGCATATAAAAAATCTACCTAATCAAACTTTTCCCATGGTTGTTAACTGGGCCGTTACAAATGAATCATGTCAAATAGCACAAACTACGGATAGCTATGCCTGCAAGGAAAATAGTGAATGCGTCGATAATGATCCAGATTATGACGGTTACAGATGCAAGTGTTTGGAAAGTTTTGAAGGAAATCCATACCTTCCTGGAGGCTGCACAGGAGTAGGAACAGTATTGATTGTTCTATTTGTGGGGATAATTTCCTCCTTATACCAAAAGAGGAAACATACCAAATTGAAAGGGAAATTCTTTAGGCAGAATGGAGGTTCTATTTTGGAACAGAAACTTCTTCAAAGAAAAGACTCGTCTAAAATAGCTAATATTTTCAAAGAAAGTGAACTAAGGAAAGCCACTAACAACTATGATGAGAGCTTAATCATAGGTAGAGGAAGTTTTGGTACAGTTTACAAAGGGGAACTAGAAGATGATAGAATTGTTGCTATCAAAATGTCCAAAACAATAGATGAAAGCCAAATTGAGCTATTCATTAATGAGGTGGATGTTGTCTCCCAAATAAATCACAGGAATGTGGTTAAACTCTTGGGGTGTTGTCTAGAAACAGAAGTTCCTTTGCTGGTTTATGAATTTGTTAGCAATGGTACTCTTTCTGATTTTATACACACACAAGGTAATGAGGTGAATAATGAATCATGGAAAATTCGTCTTAAGATAGCAACAGATGTAGCTGGAGCTTTGTCATATCTACATTCAGCTGCTTCAATACCAATTATCCACAGAGATGTCAAGAGTGCTAACATTCTCTTAGATGGAACCAACACTGCCAAAGTATCTGATTTTGGAGCGTCAAAATTAGTACCACTTGACCAATCTGAAATAGCCACAATGGTGCAAGGAACTATTGGTTACTTAGATCCAGAGTATATGCTAACAAGCCAATTGACTGAAAAAAGTGATGTATATAGCTTTGGGGTAGTTGTTGTAGAGCTGCTCACAGGGGAGAGACCTTTTAGTTTTAGTAGGCCAGAAGAGAGAAGAAATCTTGCTGCGCATTTTCTGTCTTGCGATAATGTGTTTGAAATTATTCAAGATGGTATGTTGAATGAAGAAAACAAACAAGAGATCAAGGAGGTAGCTGTTCTTGCAGGAAAGTGTTTGAGACTAAGAGGGGAGGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTGGAAACAATGATCTTAAATCAAACGTGGAGATATTGGGTATGCGATAGCTTAAAAGATCAGGTATTGATTGACTTGGATGATGGAAGATGA 1875 0.3712 MHPLIMLAALFLLVEAVASLAREAVASDQLQQVLPGCNNTCGDVLVPYPFGMGHSTTQDHTPCYMDSKFELTCRNSKLIYDKNILVLAPKSNENKFITVSCDGYGILNSNFKGATYSTGCLTRCDNNYDPKMVIGNNTGKCTGLGCCQVDIPPLMKNFTIQTFKFPTSTSQKGCSYSFIAKQGYYNFSVEHIKNLPNQTFPMVVNWAVTNESCQIAQTTDSYACKENSECVDNDPDYDGYRCKCLESFEGNPYLPGGCTGVGTVLIVLFVGIISSLYQKRKHTKLKGKFFRQNGGSILEQKLLQRKDSSKIANIFKESELRKATNNYDESLIIGRGSFGTVYKGELEDDRIVAIKMSKTIDESQIELFINEVDVVSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLSDFIHTQGNEVNNESWKIRLKIATDVAGALSYLHSAASIPIIHRDVKSANILLDGTNTAKVSDFGASKLVPLDQSEIATMVQGTIGYLDPEYMLTSQLTEKSDVYSFGVVVVELLTGERPFSFSRPEERRNLAAHFLSCDNVFEIIQDGMLNEENKQEIKEVAVLAGKCLRLRGEERPSMKEVAMELETMILNQTWRYWVCDSLKDQVLIDLDDGR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00771 624 FunFam Wall-associated receptor kinase 2 403 615 - -
Trre2g00771 624 ProSiteProfiles Protein kinase domain profile. 327 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00771 624 SMART serkin_6 327 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00771 624 SUPERFAMILY Protein kinase-like (PK-like) 312 604 IPR011009 -
Trre2g00771 624 Pfam Protein kinase domain 329 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00771 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Trre2g00771 624 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Trre2g00771 624 FunFam Wall-associated receptor kinase 2 297 402 - -
Trre2g00771 624 Gene3D Phosphorylase Kinase; domain 1 292 402 - -
Trre2g00771 624 CDD STKc_IRAK 333 596 - -
Trre2g00771 624 Gene3D Transferase(Phosphotransferase) domain 1 403 608 - -
Trre2g00771 624 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 30 598 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00771 Trre-Chr2 6085710 6088446 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00771 1 607 Receptor kinase-like Gene Family AT1G21230 39.580 3.42e-151 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre2g00771 Pkinase 5.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00771 - - tpra:123893715 915.22