Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00770 ATGATGCATCCATTAATAATGTTTGCTGCATTATTCCTGTTGGTAGAAGCAGTTGCATCTGATCAACTCCAACAAGTCCTACCAGGCTGCAATTACACTTGTGGAGATGTACTAGTTCCATATCCATTTGGCATGGGACATTCAACATCACAAGATCATACACCATGTTACATGGATTCTAAATTTGAGCTCACTTGTAGAAACTCAAAATTAATCTATAATAAAAATATCCTAGTCCAAGACATAAATCCCCAGAGTCAAATGGTAATGAAATTTTTTGTCTCACATCTTTGTCCTCATAGTAATAATACTGAAGAAGCGAATAGACCTCTTCTCAGTGTTTCTTCTTTTACAATTTCAAGCACAGAAAACAAATTCATAACAGTTAGTTGCGACGGTTATGGAATTCTCAACAGTCATTTCAAGGGTGCAACTTATTCAACAGGGTGCTTAACAAGATGTGATAATAATTATGACCCTAAAATGGTAATTGGGAATAACACTGGAAAATGCACAGGTTTAGGGTGTTGCCAAGTGGATATTCCTCCACTTATGAAAAATTTCACTATACAAACATTTAAATTCCCAACTTCTACATCTCAGAAAGGTTGTAGCTTTTCCTTTATTGCAAAACAAGGATACTATAATTTTTCTGTAGAGCATATAAATAATCTACGTAATCAAACTTTTCCCATGGTTGTTAACTGGGCAGTTACAAATGAATCATGTCAAATAGCACGAACTACGGATAGCTATGCCTGCAAGGAAAATAGTAAATGTGTCCATGATGATCCAGATTATGACGGTTACAGATGCAAGTGTTTGGAAGGTTTTGAAGGAAATCCATACCTTCCTGGAGGCTGCACAGACATTGATGAATGTGCAAAAAATTTACATGGATGCAAAAATAGCGCAAATTGCATCAACACTGCTGGGAATCACACTTGTTTCTGTCCTGTGGGGCAAACCGGTGATGGAACAAAGGAAGGAGGGTGCAAACTACCAGATCGAAATGTATATATATATTTTATTGGATTAAGAGCAGCATTAACTGTTCTATTTGTGGGGATAATTTTCACCTTAATATACCAAAAGAGGAAACATACCAAATTGAAAGTGAAATTCTTTAGGCAGAATGGAGGTTCTATTTTGGAACAGAAACTTCTTCAAAGAAAAGACTCGTCTAAAATAGCTAATATTTTCAAAGAAAGTGAGCTAAGGAAAGCCACTAACAACTATGATAAGAGCTTAATCATAGGTAGAGGAAGTTTTGGTACAGTTTACAAAGGGGAACTAGAAGATGATAGAATTGTTGCTATCAAAATGTCCAAAACAATAGATGAAAGCCAAATTGAGCTATTCATTAATGAGGTGGATGTCGTCTCCCAAATAAATCACAGGAATGTGGTTAAACTCTTGGGGTGTTGTCTAGAAACAGAAGTTCCGTTGCTGGTTTATGAATTTGTTAGCAATGGTACTCTTTCTGATTTTATACACACACAAGGTAATGAGGTGAAAAATGAATCATGGAAAATTCGTCTAAAGATAGCAACAGATGTAGCTGGAGCTTTGTCATATCTACATTCAGCTGCTTCAATACCCATTATCCACAGAGATGTCAAGAGTGCTAACATTCTCTTAGATGGAACCAACACTGCCAAAGTATCTGATTTTGGAGCTTCAAAATTAGTACCACTTGACCAATCTGAAATAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGACCCAGAGTATATGCTAACAAGCCAATTGACTGAAAAAAGTGATGTATATAGCTTTGGGGTAGTTGTTGTCGAGCTGCTAACAGGGGAGAGACCTTTTAGTTTTAGTAGGCCAGAAGAGAGAAGAAATCTTGCTGCGCATTTTCTGTCTTGCGATAATGTGTTTGAAATTATCCAAGATGGTATGTTGAATGAAGAAAACAAAAAAGAGATCAAGGAGGTAGCTGTTCTTGCAGCAAAGTGTTTGAGACTAAGAGGGGAGGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTGGAAACAATGATCTTAAATGTGGAGGGGAATTAG 2076 0.369 MMHPLIMFAALFLLVEAVASDQLQQVLPGCNYTCGDVLVPYPFGMGHSTSQDHTPCYMDSKFELTCRNSKLIYNKNILVQDINPQSQMVMKFFVSHLCPHSNNTEEANRPLLSVSSFTISSTENKFITVSCDGYGILNSHFKGATYSTGCLTRCDNNYDPKMVIGNNTGKCTGLGCCQVDIPPLMKNFTIQTFKFPTSTSQKGCSFSFIAKQGYYNFSVEHINNLRNQTFPMVVNWAVTNESCQIARTTDSYACKENSKCVHDDPDYDGYRCKCLEGFEGNPYLPGGCTDIDECAKNLHGCKNSANCINTAGNHTCFCPVGQTGDGTKEGGCKLPDRNVYIYFIGLRAALTVLFVGIIFTLIYQKRKHTKLKVKFFRQNGGSILEQKLLQRKDSSKIANIFKESELRKATNNYDKSLIIGRGSFGTVYKGELEDDRIVAIKMSKTIDESQIELFINEVDVVSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLSDFIHTQGNEVKNESWKIRLKIATDVAGALSYLHSAASIPIIHRDVKSANILLDGTNTAKVSDFGASKLVPLDQSEIATMVQGTIGYLDPEYMLTSQLTEKSDVYSFGVVVVELLTGERPFSFSRPEERRNLAAHFLSCDNVFEIIQDGMLNEENKKEIKEVAVLAAKCLRLRGEERPSMKEVAMELETMILNVEGN 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00770 691 CDD STKc_IRAK 419 682 - -
Trre2g00770 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Trre2g00770 691 FunFam Wall-associated receptor kinase 2 383 488 - -
Trre2g00770 691 SMART serkin_6 413 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00770 691 ProSiteProfiles EGF-like domain profile. 290 328 IPR000742 -
Trre2g00770 691 FunFam Wall-associated receptor kinase 2 489 690 - -
Trre2g00770 691 ProSitePatterns Protein kinases ATP-binding region signature. 419 441 IPR017441 GO:0005524
Trre2g00770 691 ProSiteProfiles Protein kinase domain profile. 413 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00770 691 SUPERFAMILY Protein kinase-like (PK-like) 396 682 IPR011009 -
Trre2g00770 691 Gene3D Plasmodium vivax P25 domain 233 338 - -
Trre2g00770 691 Gene3D Transferase(Phosphotransferase) domain 1 489 689 - -
Trre2g00770 691 Gene3D Phosphorylase Kinase; domain 1 377 488 - -
Trre2g00770 691 SMART egfca_6 290 333 IPR001881 GO:0005509
Trre2g00770 691 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 684 IPR045274 GO:0007166
Trre2g00770 691 SMART egf_5 293 333 IPR000742 -
Trre2g00770 691 SMART egf_5 242 289 IPR000742 -
Trre2g00770 691 SUPERFAMILY EGF/Laminin 290 325 - -
Trre2g00770 691 CDD EGF_CA 290 325 - -
Trre2g00770 691 Pfam Protein kinase domain 415 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00770 691 FunFam Fibrillin 2 286 329 - -
Trre2g00770 691 Pfam Wall-associated receptor kinase galacturonan-binding 30 88 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00770 Trre-Chr2 6077951 6080508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00770 2 684 Receptor kinase-like Gene Family AT1G21230 44.681 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre2g00770 Pkinase 3.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00770 - - tpra:123893715 1187.94