Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00769 ATGCATCCATTAATAATGGTTGCTGCATTATCCCTGTTGGTAGAAGCAGTTGCATCTGATCAACCCCAACAAGTCCTACCAGGCTGCAATTACACTTGTGGAGATATACAAATTCCATATCCATTTGGCATAGGAAATTCAACAACACAAGATCATACGCCATGTTACATGGATTCCAAATTTAATCTCACTTGTGTAAACAATTCGACATTAATCAGTGGTAAGCGTATCCAAGTCCTAGACATAAATCCACAAGGTCAAATGGTAATGAAATTTTTTGTCTCGCATCTCTGTACTAATAGTAGTAATAATACTGAAGAAGCAAATACACCTTTTCTCAGAGTTCCTTCTCTCACAGTTTCAAGCACAGAAAACAAATTCATAACCGTTGGATGCGACAGTTACGGATATCTCAACAGTAATTTCAAGGGTGCCACTTATTCAACAGGGTGCTTAACAAGGTGTTATGATTTTGATCCTAAAATGGTAATTGGGAATAACACTGGAAAATGCACAGGTTTAGGGTGTTGCCAAATAGATATTCCTCCACTTATGAAAAATATCACTATACAAACATTTAAATTCCCAACTTCTACAACCTCTCAGAAAGATTGTAGCTATTCCTTTATTGCAAAACAAGGATCCTATAATTTTTCTGTAGACCATATAAATAATCTACCTAATCAAACTTTCCCCTTGGTTGTTAATTGGGCTATTACAAGTGAATCATGTCAAATAGCACAAACTACAACTAGCTACGCCTGCACGGAAAATAGTGAATGTGTTGATGATGATTTAGATTATGACGGTTACAGATGCAAGTGTTCGGAAGGGTTTGAAGGAAATCCATACCTTCCTGGAGGCTGCACAGACATTGACGAATGTGCAACAAATTTACATGGATGCAAAAATAGTGCAAATTGTAACAACACTGCTGGGAATTACACTTGTTTCTGTCCTGTGGGCCAAACCGGAGATGGAACAAAAGAAGGAGGGTGCCAACTACCTGATGGAAATGCATATCCAATAGTACCTACTGTCCTTGGAGTAGGAACAGTATTGATTGTTCTATTTAAACTTCTTCAAAGAAAAGATTCATCTCAAATAGCTAATATTTTTAAAGAAAATGAACTAAGGAAAGCCACTAACAACTATGACGAGAACTTAATCATAGGTAGAGGAGGTTTTGGTACAGTTTTCAAAGGAGAACTAGATGATAATAGAATTGTTGCTATCAAAAAGTCCAAAACAATAGATGAAAGCCAGATTGAGCAATTCATTAACGAAGTGGATGTTGTCTCCCAAATAAATCACAGGAATGTGGTTAAACTCTTAGGGTGTTGTCTAGAAACAGAAGTTCCTTTGTTGGTTTATGAATTAGTTAGCAATGGTACTCTTTCTGACTTTATACACACAGAAGGTAAAGTGAATAATCAAACTTGGAAAATTCGCCTTAAGATAGCAGCAGAGGTAGCTGGAGCTTTGTCATATCTACATTCAGCGGCCTCAATACCAATTATCCACAGAGATGTCAAGAGTGATAACATTCTCTTAGATAGTACCAACACTGCAAAAGTATCAGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAAGTAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGACCCAGAGTATATGCAAACAAGCCAATTGACTGAAAAAAGTGATGTATATAGCTTTGGCGTAGTTCTTGTGGAGCTGCTCACAGGGGAGAGACCTTTTAGTTTTGGTAGGCCAGAAGAGAGAAGAAGTCTTGCTATGCATTTTCTGTCCTGCTTGAAAAAGGATAATGTGTTTGATGTCATTCAAGAAGGTATGTTGAATGAAGAAAACAAACAAGAGATCAAGGAGGTAGCTGTTCTTGCGGCAAAGTGTTTGAGACTAAGAGGGGAGGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTAGAGGGAATGAGGTTAATGGATAAGCACTCTTGGATCAACGAAGACCTAAATGTAGAGGTGAGTTGCTACTTGCTTCATGAATCATCATCTAGCATTTTTGAACTTGGTGATAGCAGCAAACATGGAGATATTGGGTATGACAGCTTGAAAGATCATGTATTGATTGCCTTGGATGATGGAAGATGA 2151 0.3789 MHPLIMVAALSLLVEAVASDQPQQVLPGCNYTCGDIQIPYPFGIGNSTTQDHTPCYMDSKFNLTCVNNSTLISGKRIQVLDINPQGQMVMKFFVSHLCTNSSNNTEEANTPFLRVPSLTVSSTENKFITVGCDSYGYLNSNFKGATYSTGCLTRCYDFDPKMVIGNNTGKCTGLGCCQIDIPPLMKNITIQTFKFPTSTTSQKDCSYSFIAKQGSYNFSVDHINNLPNQTFPLVVNWAITSESCQIAQTTTSYACTENSECVDDDLDYDGYRCKCSEGFEGNPYLPGGCTDIDECATNLHGCKNSANCNNTAGNYTCFCPVGQTGDGTKEGGCQLPDGNAYPIVPTVLGVGTVLIVLFKLLQRKDSSQIANIFKENELRKATNNYDENLIIGRGGFGTVFKGELDDNRIVAIKKSKTIDESQIEQFINEVDVVSQINHRNVVKLLGCCLETEVPLLVYELVSNGTLSDFIHTEGKVNNQTWKIRLKIAAEVAGALSYLHSAASIPIIHRDVKSDNILLDSTNTAKVSDFGASRLVPLDQTEVATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGERPFSFGRPEERRSLAMHFLSCLKKDNVFDVIQEGMLNEENKQEIKEVAVLAAKCLRLRGEERPSMKEVAMELEGMRLMDKHSWINEDLNVEVSCYLLHESSSSIFELGDSSKHGDIGYDSLKDHVLIALDDGR 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00769 716 FunFam Wall-associated receptor kinase 2 356 460 - -
Trre2g00769 716 CDD STKc_IRAK 391 658 - -
Trre2g00769 716 ProSitePatterns Calcium-binding EGF-like domain signature. 291 317 IPR018097 GO:0005509
Trre2g00769 716 SUPERFAMILY EGF/Laminin 291 326 - -
Trre2g00769 716 FunFam Wall-associated receptor kinase 2 461 677 - -
Trre2g00769 716 Gene3D Phosphorylase Kinase; domain 1 357 460 - -
Trre2g00769 716 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 662 IPR045274 GO:0007166
Trre2g00769 716 SMART serkin_6 385 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00769 716 SMART egf_5 243 290 IPR000742 -
Trre2g00769 716 SMART egf_5 294 334 IPR000742 -
Trre2g00769 716 ProSitePatterns Protein kinases ATP-binding region signature. 391 414 IPR017441 GO:0005524
Trre2g00769 716 Gene3D Transferase(Phosphotransferase) domain 1 461 677 - -
Trre2g00769 716 SMART egfca_6 291 334 IPR001881 GO:0005509
Trre2g00769 716 ProSiteProfiles Protein kinase domain profile. 385 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00769 716 ProSiteProfiles EGF-like domain profile. 291 329 IPR000742 -
Trre2g00769 716 Pfam Calcium-binding EGF domain 291 328 IPR001881 GO:0005509
Trre2g00769 716 Gene3D Plasmodium vivax P25 domain 234 337 - -
Trre2g00769 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Trre2g00769 716 Pfam Wall-associated receptor kinase galacturonan-binding 29 88 IPR025287 GO:0030247
Trre2g00769 716 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 308 319 IPR000152 -
Trre2g00769 716 SUPERFAMILY Protein kinase-like (PK-like) 368 656 IPR011009 -
Trre2g00769 716 CDD EGF_CA 291 326 - -
Trre2g00769 716 Pfam Protein kinase domain 387 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00769 Trre-Chr2 6072672 6075416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00769 1 716 Receptor kinase-like Gene Family AT1G21230 42.444 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre2g00769 Pkinase 1.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00769 - - tpra:123893723 1292.33