Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00768 ATGCATCCATTAATAATGCTTGCTGCATTATTCCTGTTGGTAGAAGCAGTTGCATCTTTGGCCAGAGAAGCACTTGCAGCTGATCAACCCCAACAAGTCCTACCAGGCTGCAATAACACTTGTGGAGATGTACTAGTTCCATATCCATTTGGCATGGGATATTCAACAACACAAGATAATACACCATGTTACATGGATTCCAAATTTGAGCTCACTTGTAGAAACTCAAAATTAATCTATGATAAAAATATCCTAGTCCTAGAAATAAATCCCCAAAGTCAAATGGTAATGAAATTTTTTGTCTCACATCTTTGTCCTCATAGTAATAATACTGAAGAAGCGAATAAACCTCTTCTCAGAGTTTCTTCTTTCACAATTTCAAGCACAGAAAACAAATTCATAACCGTTAGTTGCGACGGTTATGGAATTCTCAACAGTAATTTCAAGGGTGCAACTTATTCAACAGGGTGCTTAACAAGATGTGATAATAATTATGACCCTAAAATGGTAATTGGGAATAACACTGGAAAATGCACAGGTTTAGGGTGTTGCCAAGTGGATATTCCTCCACTTATGAAAAATTTCACTATACAAACATTTAAATTCCCAACTTCTACATCTCAGAAAGGTTGTAGCTATTCCTTTATTGCAAAACAAGGATACTATAATTTTTCTGTAGAGCATATAAAAAATCTACCTAATCAAACTTTTCCCATGGTTGTTAACTGGGCCGTTACAAATGAATCATGTCAAATAGCACAAACTACGGATAGCTATGCCTGCAAGGAAAATAGTGAATGCGTCGATAATGATCCAGATTATGACGGTTACAGATGCAAGTGTTTGGAAGGTTTTGAAGGAAATCCATACCTTCCTGGAGGCTGCACAGACATTGACGAATGTGCAAAAAATTTACATGGATGCAAAAATATTGTAAATTGCAACAACACTGCTGGGAATTACACTTGTTTCTGTCCTGTGGGGCAAACCGGTGATGGAACAAAGGAAGGAGGGTGCAAACTACCTGAACGAAAAGCATATATATATGTTATTGGAGTAGGAGCAGTATTGATTGTTCTATTTGTGGGGATAATTTCCTCCTTATACCAAAAGAGGAAACATACCAAATTGAAAGGGAAATTCTTTAGGCAGAATGGAGGTTCTATTTTGGAACAGAAACTTCTTCAAAGAAAAGACTCGTCTAAAATAGCAAATATTTTCAAAGAAAGTGAACTAAGGAAAGCCACAAACAACTATGATGAGAGCTTAATCATAGGTAGAGGAAGTTTTGGTACAGTTTACAAAGGGGAACTAGAAGATGATAGAATTGTTGCTATCAAAATGTCCAAAACAATAGATGAAAGCCAAATTGAGCTATTCATTAATGAGGTGGATGTTGTCTCCCAAATAAATCACAGGAATGTGGTTAAACTCTTAGGGTGTTGTCTAGAAACAGAAGTTCCTTTGTTGGTTTATGAATTTGTTAGCAATGGTACTCTTTCTGATTTTATACACACACAAGGTAATGAGGTGAATAATGAATCATGGAAAATTCGTCTTAAGATAGCAACAGATGTAGCTGGAGCTTTGTCATATCTACATTCAGCTGCTTCAATACCCATTATCCACAGAGATGTCAAGAGTGCTAACATTCTCTTAGATGGAACCAACACTGCCAAAGTATCTGATTTTGGAGCTTCAAAATTAGTACCACTTGACCAATCTGAAATAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGACCCAGAGTATATGCTAACAAGCCAATTGACTGAAAAAAGTGATGTATATAGCTTTGGGGTAGTTGTTGTCGAGCTGCTAACAGGGGAGAGACCTTTTAGTTTTAGTAGGCCAGAAGAGAGAAGAAATCTTGCTGCGCATTTTCTGTCTTGCAATAATGTGTTTGAAATTATCCAAGATGGTATGTTGAATGAAGAAAACAAAAAAGAGATCAAGGAGGTAGCTGTTCTTGCATCAAAGTGTTTGAGACTAAGAGGGGAGGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTGGAAGCAATGATCTTAAATGTAGAGGGGAATTAG 2094 0.3701 MHPLIMLAALFLLVEAVASLAREALAADQPQQVLPGCNNTCGDVLVPYPFGMGYSTTQDNTPCYMDSKFELTCRNSKLIYDKNILVLEINPQSQMVMKFFVSHLCPHSNNTEEANKPLLRVSSFTISSTENKFITVSCDGYGILNSNFKGATYSTGCLTRCDNNYDPKMVIGNNTGKCTGLGCCQVDIPPLMKNFTIQTFKFPTSTSQKGCSYSFIAKQGYYNFSVEHIKNLPNQTFPMVVNWAVTNESCQIAQTTDSYACKENSECVDNDPDYDGYRCKCLEGFEGNPYLPGGCTDIDECAKNLHGCKNIVNCNNTAGNYTCFCPVGQTGDGTKEGGCKLPERKAYIYVIGVGAVLIVLFVGIISSLYQKRKHTKLKGKFFRQNGGSILEQKLLQRKDSSKIANIFKESELRKATNNYDESLIIGRGSFGTVYKGELEDDRIVAIKMSKTIDESQIELFINEVDVVSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLSDFIHTQGNEVNNESWKIRLKIATDVAGALSYLHSAASIPIIHRDVKSANILLDGTNTAKVSDFGASKLVPLDQSEIATMVQGTIGYLDPEYMLTSQLTEKSDVYSFGVVVVELLTGERPFSFSRPEERRNLAAHFLSCNNVFEIIQDGMLNEENKKEIKEVAVLASKCLRLRGEERPSMKEVAMELEAMILNVEGN 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00768 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Trre2g00768 697 Gene3D Transferase(Phosphotransferase) domain 1 495 695 - -
Trre2g00768 697 FunFam Fibrillin 2 293 336 - -
Trre2g00768 697 ProSiteProfiles Protein kinase domain profile. 419 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00768 697 Gene3D Phosphorylase Kinase; domain 1 384 494 - -
Trre2g00768 697 Pfam Protein kinase domain 421 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00768 697 FunFam Wall-associated receptor kinase 2 389 494 - -
Trre2g00768 697 CDD STKc_IRAK 425 688 - -
Trre2g00768 697 Gene3D Laminin 239 291 - -
Trre2g00768 697 SMART egf_5 300 340 IPR000742 -
Trre2g00768 697 SMART egf_5 249 296 IPR000742 -
Trre2g00768 697 SUPERFAMILY Protein kinase-like (PK-like) 402 688 IPR011009 -
Trre2g00768 697 ProSiteProfiles EGF-like domain profile. 297 335 IPR000742 -
Trre2g00768 697 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 314 325 IPR000152 -
Trre2g00768 697 CDD EGF_CA 297 332 - -
Trre2g00768 697 SMART egfca_6 297 340 IPR001881 GO:0005509
Trre2g00768 697 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 690 IPR045274 GO:0007166
Trre2g00768 697 Pfam Wall-associated receptor kinase galacturonan-binding 37 95 IPR025287 GO:0030247
Trre2g00768 697 SUPERFAMILY EGF/Laminin 297 332 - -
Trre2g00768 697 SMART serkin_6 419 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00768 697 Gene3D Laminin 294 336 - -
Trre2g00768 697 ProSitePatterns Protein kinases ATP-binding region signature. 425 447 IPR017441 GO:0005524
Trre2g00768 697 FunFam Wall-associated receptor kinase 2 495 696 - -
Trre2g00768 697 ProSitePatterns Calcium-binding EGF-like domain signature. 297 323 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00768 Trre-Chr2 6062206 6064824 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00768 1 690 Receptor kinase-like Gene Family AT1G21230 44.789 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre2g00768 Pkinase 2.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00768 - - tpra:123893715 1198.34