Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g00767 | ATGCATCCATTAATAATGGTTGCTGCATTATTCCTGTTGGTAGAAGCAGTTGCATTTGATCAACCACAACAAGTCCTACCAGGCTGCAATTACACTTGTGGAGATATACAAATTCCATATCCATTTGGCATAGGAAATTCAACAACACAAGATCATACGCCATGTTACATGGATTCCAAATTTAATCTCACTTGTGTAAACAATTCGACATTAATCAGTGGTAAGCGTATCCAAGTCCTAGACATAAATCCACAAGGTCAAATGGTAATGAAATTTTTTGTCTCGCATCTCTGTACTAATAGTAGTAATAATACTGAAGAAGCAAATACACCTTTTCTCAGAGTTCCTTCTCTCACAGTTTCAAGCACAGAAAACAAATTCATAACCGTTGGATGCGACAGTTACGGATATCTCAACAGTAATTTCAAGGGTGCCACTTATTCAACAGGGTGCTTAACAAGGTGTTATGATTTTGATCCTAAAATGGTAATTGGGAATAACACTGGAAAATGCACAGGTTTAGGGTGTTGCCAAATAGATATTCCTCCACTTATGAAAAATATCACTATACAAACATTTAAATTCCCAACTTCTACAACCTCTCAGGAAGATTGTAGCTATTCCTTTATTGCAAAACAAGGATCCTATAATTTTTCTGTAGAGCATATAAATAATCTACCTAATCAAACTTTCCCCTTGGTTGTTAATTGGGCTATTACAAGTGAATCATGTCAAATAGCACAAACTACAACTAGCTACGCCTGCACGGAAAATAGTGAATGTGTTGATGATGATTTAGATTATGACGGTTACAGATGCAAGTGTTCGGAAGGGTTTGAAGGAAATCCATACCTTCCTGGAGGCTGCACAGACATTGACGAATGTGCAACAAATTTACATGTATGCAAAAATAGCGCAAATTGTAACAACACTGCTGGGAATTACACTTGTTTCTGTCCTGTGGGCCAAACCGGAGATGGAACAAAAGAAGGAGGGTGCCAACTACCTGATGGAAATGCATATCCAATAGTACCTACTGTCCTTGGAGTAGGAGCAGCATTGATTGTTCTATTTGTGGGGATAATTTTCACCTTAATATACCAAAAGAGGAAACTTACCAAATTGAAAGAGAAATTCTTTAGGCAGAATGGAGGTTCTATTTTGGAACAGAAACTTCTTCAAAGAAAAGATTCATCTCAAATAGCTAATATTTTTAAAGAAAATGAACTAAGGAAAGCCACTAACAACTATGACGAGAACTTAATCATAGGTAGAGGAGGTTTTGGTACAGTTTTCAAAGGAGAACTAGATGATAATAGAATTGTTGCTATCAAAAAGTCCAAAACAATAGATGAAAGCCAGATTGAGCAATTCATTAACGAAGTGGATGTTGTCTCCCAAATAAATCACAGGAATGTGGTTAAACTCTTAGGGTGTTGTCTAGAAACAGAAGTTCCTTTGTTGGTTTATGAATTTGTTAGCAATGGTACTCTTTCTGACTTTATACACACAGAAGGTAAAGTGAATAATCAAACTTGGAAAATTCGCCTTAAGATAGCAGCAGAGGTAGCCGGAGCTTTGTCATATCTACATTCAGCGGCCTCAATACCAATTATCCACAGAGATGTCAAGAGTGATAACATTCTCTTAGATAGTACCAACACTGCAAAAGTATCAGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAAGTAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGACCCTGAGTATATGCAAACAAGCCAATTGACTGAAAAAAGTGATGTATATAGCTTTGGCGTAGTTCTTGTGGAGCTGCTCACAGGGGAGAGACCTTTTAGTTTTGGTAGGCCAGAAGAGAGAAGAAGTCTTGCTATGCATTTTCTGTCCTGCTTGAAAAAGGATAATGTGTTTGATGTCATTCAAGAAGGTATGTTGAATGAAGAAAACAAACAAGAGATCAAGGAGGTAGCTGTTCTTGCGGCAAAGTGTTTGAGACTAAGAGGGGAGGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTAGAGGGAATGAGGTTAATGGATAAGCACTCTTGGATCAACGAAGACCTAAATGTAGAGGTGAGTCGCTACTTGCTTCATGAATCATCATCTAGCATTTTTGAACTTGGTGATAGCAGCAAACGCGGAGATATTGGGTATGACAGCTTGAAAGATCATGTATTGATTGCCTTGGATGATGGAAGATGA | 2247 | 0.3792 | MHPLIMVAALFLLVEAVAFDQPQQVLPGCNYTCGDIQIPYPFGIGNSTTQDHTPCYMDSKFNLTCVNNSTLISGKRIQVLDINPQGQMVMKFFVSHLCTNSSNNTEEANTPFLRVPSLTVSSTENKFITVGCDSYGYLNSNFKGATYSTGCLTRCYDFDPKMVIGNNTGKCTGLGCCQIDIPPLMKNITIQTFKFPTSTTSQEDCSYSFIAKQGSYNFSVEHINNLPNQTFPLVVNWAITSESCQIAQTTTSYACTENSECVDDDLDYDGYRCKCSEGFEGNPYLPGGCTDIDECATNLHVCKNSANCNNTAGNYTCFCPVGQTGDGTKEGGCQLPDGNAYPIVPTVLGVGAALIVLFVGIIFTLIYQKRKLTKLKEKFFRQNGGSILEQKLLQRKDSSQIANIFKENELRKATNNYDENLIIGRGGFGTVFKGELDDNRIVAIKKSKTIDESQIEQFINEVDVVSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLSDFIHTEGKVNNQTWKIRLKIAAEVAGALSYLHSAASIPIIHRDVKSDNILLDSTNTAKVSDFGASRLVPLDQTEVATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGERPFSFGRPEERRSLAMHFLSCLKKDNVFDVIQEGMLNEENKQEIKEVAVLAAKCLRLRGEERPSMKEVAMELEGMRLMDKHSWINEDLNVEVSRYLLHESSSSIFELGDSSKRGDIGYDSLKDHVLIALDDGR | 748 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g00767 | 748 | Pfam | Protein tyrosine and serine/threonine kinase | 422 | 687 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g00767 | 748 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 538 | 550 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g00767 | 748 | SMART | egfca_6 | 291 | 334 | IPR001881 | GO:0005509 | |
Trre2g00767 | 748 | ProSitePatterns | Calcium-binding EGF-like domain signature. | 291 | 317 | IPR018097 | GO:0005509 | |
Trre2g00767 | 748 | CDD | STKc_IRAK | 423 | 690 | - | - | |
Trre2g00767 | 748 | ProSiteProfiles | EGF-like domain profile. | 291 | 329 | IPR000742 | - | |
Trre2g00767 | 748 | SMART | egf_5 | 294 | 334 | IPR000742 | - | |
Trre2g00767 | 748 | SMART | egf_5 | 243 | 290 | IPR000742 | - | |
Trre2g00767 | 748 | FunFam | Wall-associated receptor kinase 2 | 387 | 492 | - | - | |
Trre2g00767 | 748 | SUPERFAMILY | Protein kinase-like (PK-like) | 400 | 688 | IPR011009 | - | |
Trre2g00767 | 748 | Gene3D | Phosphorylase Kinase; domain 1 | 382 | 492 | - | - | |
Trre2g00767 | 748 | Pfam | Wall-associated receptor kinase galacturonan-binding | 29 | 88 | IPR025287 | GO:0030247 | |
Trre2g00767 | 748 | Gene3D | Transferase(Phosphotransferase) domain 1 | 493 | 710 | - | - | |
Trre2g00767 | 748 | ProSitePatterns | Protein kinases ATP-binding region signature. | 423 | 446 | IPR017441 | GO:0005524 | |
Trre2g00767 | 748 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 22 | 694 | IPR045274 | GO:0007166 | |
Trre2g00767 | 748 | ProSiteProfiles | Protein kinase domain profile. | 417 | 699 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00767 | 748 | SUPERFAMILY | EGF/Laminin | 291 | 326 | - | - | |
Trre2g00767 | 748 | Gene3D | Plasmodium vivax P25 domain | 234 | 337 | - | - | |
Trre2g00767 | 748 | FunFam | Wall-associated receptor kinase 2 | 493 | 709 | - | - | |
Trre2g00767 | 748 | ProSitePatterns | Aspartic acid and asparagine hydroxylation site. | 308 | 319 | IPR000152 | - | |
Trre2g00767 | 748 | FunFam | Fibrillin 2 | 287 | 330 | - | - | |
Trre2g00767 | 748 | SMART | serkin_6 | 417 | 699 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00767 | 748 | Pfam | Calcium-binding EGF domain | 291 | 328 | IPR001881 | GO:0005509 | |
Trre2g00767 | 748 | CDD | EGF_CA | 291 | 326 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g00767 | Trre-Chr2 | 6057334 | 6060080 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g00767 | 1 | 748 | Receptor kinase-like Gene Family | AT1G21230 | 44.226 | 0.0 | 580 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Trre2g00767 | PK_Tyr_Ser-Thr | 7.8e-53 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g00767 | - | - | tpra:123893723 | 1382.85 |