Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00767 ATGCATCCATTAATAATGGTTGCTGCATTATTCCTGTTGGTAGAAGCAGTTGCATTTGATCAACCACAACAAGTCCTACCAGGCTGCAATTACACTTGTGGAGATATACAAATTCCATATCCATTTGGCATAGGAAATTCAACAACACAAGATCATACGCCATGTTACATGGATTCCAAATTTAATCTCACTTGTGTAAACAATTCGACATTAATCAGTGGTAAGCGTATCCAAGTCCTAGACATAAATCCACAAGGTCAAATGGTAATGAAATTTTTTGTCTCGCATCTCTGTACTAATAGTAGTAATAATACTGAAGAAGCAAATACACCTTTTCTCAGAGTTCCTTCTCTCACAGTTTCAAGCACAGAAAACAAATTCATAACCGTTGGATGCGACAGTTACGGATATCTCAACAGTAATTTCAAGGGTGCCACTTATTCAACAGGGTGCTTAACAAGGTGTTATGATTTTGATCCTAAAATGGTAATTGGGAATAACACTGGAAAATGCACAGGTTTAGGGTGTTGCCAAATAGATATTCCTCCACTTATGAAAAATATCACTATACAAACATTTAAATTCCCAACTTCTACAACCTCTCAGGAAGATTGTAGCTATTCCTTTATTGCAAAACAAGGATCCTATAATTTTTCTGTAGAGCATATAAATAATCTACCTAATCAAACTTTCCCCTTGGTTGTTAATTGGGCTATTACAAGTGAATCATGTCAAATAGCACAAACTACAACTAGCTACGCCTGCACGGAAAATAGTGAATGTGTTGATGATGATTTAGATTATGACGGTTACAGATGCAAGTGTTCGGAAGGGTTTGAAGGAAATCCATACCTTCCTGGAGGCTGCACAGACATTGACGAATGTGCAACAAATTTACATGTATGCAAAAATAGCGCAAATTGTAACAACACTGCTGGGAATTACACTTGTTTCTGTCCTGTGGGCCAAACCGGAGATGGAACAAAAGAAGGAGGGTGCCAACTACCTGATGGAAATGCATATCCAATAGTACCTACTGTCCTTGGAGTAGGAGCAGCATTGATTGTTCTATTTGTGGGGATAATTTTCACCTTAATATACCAAAAGAGGAAACTTACCAAATTGAAAGAGAAATTCTTTAGGCAGAATGGAGGTTCTATTTTGGAACAGAAACTTCTTCAAAGAAAAGATTCATCTCAAATAGCTAATATTTTTAAAGAAAATGAACTAAGGAAAGCCACTAACAACTATGACGAGAACTTAATCATAGGTAGAGGAGGTTTTGGTACAGTTTTCAAAGGAGAACTAGATGATAATAGAATTGTTGCTATCAAAAAGTCCAAAACAATAGATGAAAGCCAGATTGAGCAATTCATTAACGAAGTGGATGTTGTCTCCCAAATAAATCACAGGAATGTGGTTAAACTCTTAGGGTGTTGTCTAGAAACAGAAGTTCCTTTGTTGGTTTATGAATTTGTTAGCAATGGTACTCTTTCTGACTTTATACACACAGAAGGTAAAGTGAATAATCAAACTTGGAAAATTCGCCTTAAGATAGCAGCAGAGGTAGCCGGAGCTTTGTCATATCTACATTCAGCGGCCTCAATACCAATTATCCACAGAGATGTCAAGAGTGATAACATTCTCTTAGATAGTACCAACACTGCAAAAGTATCAGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAAGTAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGACCCTGAGTATATGCAAACAAGCCAATTGACTGAAAAAAGTGATGTATATAGCTTTGGCGTAGTTCTTGTGGAGCTGCTCACAGGGGAGAGACCTTTTAGTTTTGGTAGGCCAGAAGAGAGAAGAAGTCTTGCTATGCATTTTCTGTCCTGCTTGAAAAAGGATAATGTGTTTGATGTCATTCAAGAAGGTATGTTGAATGAAGAAAACAAACAAGAGATCAAGGAGGTAGCTGTTCTTGCGGCAAAGTGTTTGAGACTAAGAGGGGAGGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTAGAGGGAATGAGGTTAATGGATAAGCACTCTTGGATCAACGAAGACCTAAATGTAGAGGTGAGTCGCTACTTGCTTCATGAATCATCATCTAGCATTTTTGAACTTGGTGATAGCAGCAAACGCGGAGATATTGGGTATGACAGCTTGAAAGATCATGTATTGATTGCCTTGGATGATGGAAGATGA 2247 0.3792 MHPLIMVAALFLLVEAVAFDQPQQVLPGCNYTCGDIQIPYPFGIGNSTTQDHTPCYMDSKFNLTCVNNSTLISGKRIQVLDINPQGQMVMKFFVSHLCTNSSNNTEEANTPFLRVPSLTVSSTENKFITVGCDSYGYLNSNFKGATYSTGCLTRCYDFDPKMVIGNNTGKCTGLGCCQIDIPPLMKNITIQTFKFPTSTTSQEDCSYSFIAKQGSYNFSVEHINNLPNQTFPLVVNWAITSESCQIAQTTTSYACTENSECVDDDLDYDGYRCKCSEGFEGNPYLPGGCTDIDECATNLHVCKNSANCNNTAGNYTCFCPVGQTGDGTKEGGCQLPDGNAYPIVPTVLGVGAALIVLFVGIIFTLIYQKRKLTKLKEKFFRQNGGSILEQKLLQRKDSSQIANIFKENELRKATNNYDENLIIGRGGFGTVFKGELDDNRIVAIKKSKTIDESQIEQFINEVDVVSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLSDFIHTEGKVNNQTWKIRLKIAAEVAGALSYLHSAASIPIIHRDVKSDNILLDSTNTAKVSDFGASRLVPLDQTEVATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGERPFSFGRPEERRSLAMHFLSCLKKDNVFDVIQEGMLNEENKQEIKEVAVLAAKCLRLRGEERPSMKEVAMELEGMRLMDKHSWINEDLNVEVSRYLLHESSSSIFELGDSSKRGDIGYDSLKDHVLIALDDGR 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00767 748 Pfam Protein tyrosine and serine/threonine kinase 422 687 IPR001245 GO:0004672|GO:0006468
Trre2g00767 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Trre2g00767 748 SMART egfca_6 291 334 IPR001881 GO:0005509
Trre2g00767 748 ProSitePatterns Calcium-binding EGF-like domain signature. 291 317 IPR018097 GO:0005509
Trre2g00767 748 CDD STKc_IRAK 423 690 - -
Trre2g00767 748 ProSiteProfiles EGF-like domain profile. 291 329 IPR000742 -
Trre2g00767 748 SMART egf_5 294 334 IPR000742 -
Trre2g00767 748 SMART egf_5 243 290 IPR000742 -
Trre2g00767 748 FunFam Wall-associated receptor kinase 2 387 492 - -
Trre2g00767 748 SUPERFAMILY Protein kinase-like (PK-like) 400 688 IPR011009 -
Trre2g00767 748 Gene3D Phosphorylase Kinase; domain 1 382 492 - -
Trre2g00767 748 Pfam Wall-associated receptor kinase galacturonan-binding 29 88 IPR025287 GO:0030247
Trre2g00767 748 Gene3D Transferase(Phosphotransferase) domain 1 493 710 - -
Trre2g00767 748 ProSitePatterns Protein kinases ATP-binding region signature. 423 446 IPR017441 GO:0005524
Trre2g00767 748 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 694 IPR045274 GO:0007166
Trre2g00767 748 ProSiteProfiles Protein kinase domain profile. 417 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00767 748 SUPERFAMILY EGF/Laminin 291 326 - -
Trre2g00767 748 Gene3D Plasmodium vivax P25 domain 234 337 - -
Trre2g00767 748 FunFam Wall-associated receptor kinase 2 493 709 - -
Trre2g00767 748 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 308 319 IPR000152 -
Trre2g00767 748 FunFam Fibrillin 2 287 330 - -
Trre2g00767 748 SMART serkin_6 417 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00767 748 Pfam Calcium-binding EGF domain 291 328 IPR001881 GO:0005509
Trre2g00767 748 CDD EGF_CA 291 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00767 Trre-Chr2 6057334 6060080 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00767 1 748 Receptor kinase-like Gene Family AT1G21230 44.226 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre2g00767 PK_Tyr_Ser-Thr 7.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00767 - - tpra:123893723 1382.85