Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00762 ATGACAAACATGCATGTAGATTCCACCATGACGAGTTCTGATAGTAGATTTGGAATTGCTCACGATGGCAACCCCAATGGTGGACTACAATTAGAGTCTTACTTAGAACCATATGAAGGAATGGATTTTGCATCATTTGAAGATGCAAAAAATTACTATACAAGGTACGCAAAACAGAAAGGTTTTAGCTTTCGGTTGGGTCGTATTACTCGATCAAGAACAAATGGATTGATGATTGGTCGGGAGATTCTTTGTTCAAAGGAGGGGTTCCGAGCTACAAAGTATGCAAAAGTGGAAAATAACAACCGTGCAAGACGTGATGAAACACGAGTAGGATGCAAGGCAATGCTATATTTAAAGAAAAATGAAGATAGATGGATTATATCTAGATTCATAAGAGATCATAATCACCAACTATGCTCCCCTAGAAGTTCACAGTTTCTTCGAGTGCACAAAAAGAAAACTAAAGTGCAGAAAAATCTTATTGATGTGCTTGATGAATCAGGTGTGCGTCCTAGCAAAATAGCATCTGTCCTGTGTACTGAAAGTGGTGGTATTGATAATGCTGGATTTAGTCAACAGGACGTCATTGATTACTTAAGCCAAAAGAGACAAAAACAAATAGAAAAAGGAGATGCTCAACTGATGTTATCATATTTTAAGAATTGTCAATTAAAGAATCCTGGGTTTTTTTATGCTTTCCAAATGGATGTGGAGGGACAGCTAGCTAATTGCTTTTGGGTTGATTCAAGGTCCAGAATGAGTTATAAATATTTTGGTGATGTGGTAACTTTTGATCCAACATATTTAACAAATAAATACAAGATGCCTTTTGTTCCGTTCACTGGAGTTAATCATCATCAACAATCCATTCTTTTTGGTTGTGCTCTGTTGTGGGATGAAACTGAAGAAAGTTTTGTTTGGTTGCTAACTACTTGGTTAGAAGCAATGCATGGAGTTTGTCCTAAAACTATTATCACAGATCAGGACGCTGCTATAACTAATGCGGTTGCAAGAGTGTTTCCGAATGTTAATCATCATTACTGTATGTGGCACATTGAAAAAAAATTTCCAGAATACTTGAGCCATATCTATCATGAATATAGTGATTTTAAAAGTCAATTTAATAAGTGTATTCACCAATCCATCACTATTGAGGATTTTGAATCTGATTGGGAGGCAATGATAGATAAATATGGATTGCAAGATAATCGATGGCTTCAGAAGATATACTCTATTAGAGCAAAATGGATTCCTGCTTATGTGCGTAACAATTTTTGTGCTGGAATGTCCACTACTCAAAGGAGTGAAAGTATGAATAAATTCTTTAAGGATTTTTTGAATTCAAGTACTTCATTGAGCAAGTTTATGACACAATATGACAAGGCTCTTGATGCACGTTATAATAAGGAAAGGGAGAAGACTTTCAAGACAATCAATTCAAAACCATTTTTGCGAACTTTATATCCAATGGAAGAAGAAGCTTCAAAAATCTATACAAGAAAGTTATTTAGAATTTTTCAAGATGAGTTAGTTGGTTCCCAGAAGTTTATTGCAGAAAAAGTTGAATTTTCCGGTGATCTTTCCACATACAAGGTTCATGAGATTTACAGAGAGAAACCTAGCTACCATGTGACTTTTCATATCATTTCCAATGAAGCAAATTGTAGTTGTCACATGTTTGAATTTTTGGGTATTCTATGTCGACATGTGTTAAATGTACTCTTAAAGAAAAAGATTCTTTCTCTTCCTTCAAATTATATGCTTCGTCGTTGGACTATTGATGCTAAAAAGGAGATATTTACAGGATTGGCAGCAGATCATCAATTGCAAGAAGGTAGCAACAAATCTTCGAGTACTTTATTATTCAATAGTATTATGGTTCATTCTCTAGGAGTATCTGAAAGAGGTTCGCGATCCGTAAAACATCATGATGTTGCAATTCAAGGTTTTCAAAAGATAATTGAAGAACTTGATTTGTTGGATCTTCAAGATTCAACAAAAGAGCTTGGTAATCCAACATCTGAAGTTATTCCAAAAGTCGGTGACAATGAAATAGTTGTACGTGATCCTCCACAAGCGGCCAATAAAGGGCGTCCACGAACTTTGAGAACGAAAGGAAGCTTGGAAAAGCTCAGTAAAGGTGGTTGTGGTTATTGCACTAAGAAAGGTCATAATAAACGTACATGTCCGGATTTAAATCGATCAAGGTTTGATATAATAAATGGCCAAGTCCAAAACTCAAATGTTGAGGCTTCTAATTCTAGTGTTTCAAAAGGAGTTGTTGAGGATGTCATTTCAGATAACTCTTCATCTCTTATCATGTCAAGTGTTGCCATCCTTTGCCCTCATTGA 2355 0.3558 MTNMHVDSTMTSSDSRFGIAHDGNPNGGLQLESYLEPYEGMDFASFEDAKNYYTRYAKQKGFSFRLGRITRSRTNGLMIGREILCSKEGFRATKYAKVENNNRARRDETRVGCKAMLYLKKNEDRWIISRFIRDHNHQLCSPRSSQFLRVHKKKTKVQKNLIDVLDESGVRPSKIASVLCTESGGIDNAGFSQQDVIDYLSQKRQKQIEKGDAQLMLSYFKNCQLKNPGFFYAFQMDVEGQLANCFWVDSRSRMSYKYFGDVVTFDPTYLTNKYKMPFVPFTGVNHHQQSILFGCALLWDETEESFVWLLTTWLEAMHGVCPKTIITDQDAAITNAVARVFPNVNHHYCMWHIEKKFPEYLSHIYHEYSDFKSQFNKCIHQSITIEDFESDWEAMIDKYGLQDNRWLQKIYSIRAKWIPAYVRNNFCAGMSTTQRSESMNKFFKDFLNSSTSLSKFMTQYDKALDARYNKEREKTFKTINSKPFLRTLYPMEEEASKIYTRKLFRIFQDELVGSQKFIAEKVEFSGDLSTYKVHEIYREKPSYHVTFHIISNEANCSCHMFEFLGILCRHVLNVLLKKKILSLPSNYMLRRWTIDAKKEIFTGLAADHQLQEGSNKSSSTLLFNSIMVHSLGVSERGSRSVKHHDVAIQGFQKIIEELDLLDLQDSTKELGNPTSEVIPKVGDNEIVVRDPPQAANKGRPRTLRTKGSLEKLSKGGCGYCTKKGHNKRTCPDLNRSRFDIINGQVQNSNVEASNSSVSKGVVEDVISDNSSSLIMSSVAILCPH 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00762 784 SMART 26again6 554 581 IPR006564 GO:0008270
Trre2g00762 784 Pfam MULE transposase domain 262 356 IPR018289 -
Trre2g00762 784 MobiDBLite consensus disorder prediction 1 22 - -
Trre2g00762 784 PANTHER OS01G0519700 PROTEIN 34 764 - -
Trre2g00762 784 Pfam SWIM zinc finger 551 578 IPR007527 GO:0008270
Trre2g00762 784 SUPERFAMILY Retrovirus zinc finger-like domains 700 736 IPR036875 GO:0003676|GO:0008270
Trre2g00762 784 ProSiteProfiles Zinc finger SWIM-type profile. 543 579 IPR007527 GO:0008270
Trre2g00762 784 Pfam FAR1 DNA-binding domain 51 140 IPR004330 -
Trre2g00762 784 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00762 Trre-Chr2 6028535 6033635 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre2g00762 MULE 2.1e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00762 - - psat:127094135 1023.08