Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00761 ATGGTTACTTACTTATCATATGGGCTTACAGACATTGACGAATGTGAAAGTGAAACATACAAACATAGATGCAAAACTAAAGCTAATTGTAAGAACATTGACGGGAATCACACATGTGTCTGTCCTAAGGGGTATTCTGGAGATGGAACAATGGCAGGAGGGTGCCAAAATTCAAAAGTATTGCCTACTGTCCTTGGAGTAGGAGCACCGGTTATTCTTCTTTTTGTGGGGACACTCTTGTACTTAATACAGTTAATACACCGTAAGAGGAAATTCATAAAATTGAAAGAGAAATTTTTTGAGCAGAATGGTGGTTTAATTTTGGAACAAAAACTCTCCACAAGAGAAGATTCCTCCTCTCAAAGTGCTCAAATATTCACACGAGATCAACTAGATAGGGCCACCAAAAACTTTGACGAGAGTTTAATCATTGGCAAAGGTGGTTTTGAGACAGAAGTTCCTTTGTTGGTTTATGAATTTGTTACCAATGGTACCCTTTCTGGTTTTATACACACACAAGGTAATAAGGTGAATAATGAATCATGGAAAACTCGTCTTAAGATAGCAGCAGAGGTTGCTGGAGCTCTGTCATATCTGCATTCATCTGCTTCAATTCCCATTATCCATAGAGATGTTAAGAGTGATAACATTCTCTTAGATGAAACAAACACTGCCAAAGTATCTGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAAGTAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGACCCTGAGTATATGCAAACAAGCCAGTTGACTGAAAAAAGTGATGTATATAGCTTTGGGGTAGTTCTTGTGGAGCTGCTCACAGGGGAGAGACCTTTTTGTTTTGTTATTCAAGAAGGTATGTTGAATGAAGAAAACAAACAAGAGATCAAGGAGGTAGCTGTTCTTGCGGCAAAGTGCTTGAGACTTAGAGGGGAAGAAAGACCTAGCATGAAGGAAGTGGCTATGGAATTGGAGGGAATGAGATTAATGGATAAGCACTCTTGGATCAATGATGATTTAAATGTGGAGGAGAGTCGGTACTTGCTTCATGAATCGTCATCTAGCATTTATGAAACTGGTGATAGCAGCAAACATGGAGATATTGGATATGACAGCTTGAAAGATCGGGTACTAATTGTCTTGGATGATGGAAGATGA 1182 0.3909 MVTYLSYGLTDIDECESETYKHRCKTKANCKNIDGNHTCVCPKGYSGDGTMAGGCQNSKVLPTVLGVGAPVILLFVGTLLYLIQLIHRKRKFIKLKEKFFEQNGGLILEQKLSTREDSSSQSAQIFTRDQLDRATKNFDESLIIGKGGFETEVPLLVYEFVTNGTLSGFIHTQGNKVNNESWKTRLKIAAEVAGALSYLHSSASIPIIHRDVKSDNILLDETNTAKVSDFGASRLVPLDQTEVATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGERPFCFVIQEGMLNEENKQEIKEVAVLAAKCLRLRGEERPSMKEVAMELEGMRLMDKHSWINDDLNVEESRYLLHESSSSIYETGDSSKHGDIGYDSLKDRVLIVLDDGR 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00761 393 SMART egfca_6 11 56 IPR001881 GO:0005509
Trre2g00761 393 ProSiteProfiles EGF-like domain profile. 11 51 IPR000742 -
Trre2g00761 393 SUPERFAMILY Protein kinase-like (PK-like) 121 339 IPR011009 -
Trre2g00761 393 CDD EGF_CA 11 48 - -
Trre2g00761 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Trre2g00761 393 ProSiteProfiles Protein kinase domain profile. 59 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00761 393 FunFam Wall-associated receptor kinase 2 161 293 - -
Trre2g00761 393 SMART serkin_6 77 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00761 393 SUPERFAMILY EGF/Laminin 10 49 - -
Trre2g00761 393 Gene3D Transferase(Phosphotransferase) domain 1 128 366 - -
Trre2g00761 393 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 151 IPR045274 GO:0007166
Trre2g00761 393 Pfam Protein tyrosine and serine/threonine kinase 151 332 IPR001245 GO:0004672|GO:0006468
Trre2g00761 393 FunFam Fibrillin 2 6 52 - -
Trre2g00761 393 Pfam EGF domain 20 50 IPR024731 -
Trre2g00761 393 Gene3D Laminin 5 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00761 Trre-Chr2 6024633 6026214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00761 4 393 Receptor kinase-like Gene Family AT1G21250 41.561 4.51e-100 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trre2g00761 PK_Tyr_Ser-Thr 4.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00761 - - mtr:25481909 596.66