Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00733 ATGGAGAATAGTGACACTAAAACATGGAAGAACCATTGCATGAATGTTTTCTCAAAATCTGAACGTGAAGATGATGAAGAAGCTCTTAAGTGTGTTGCAATGAAAAGAATCCTTACAAATGCATGCTATAGGAAAAGTGTAGAGACTAAAGAAGAAGAAGGAAAAGATTTTGACACTATGCAACTTAAATTGACAGAAAAAAAGGCTTTGTTAGAAAGACTTGTGAAAATAGCTGAAGAAGATAATGAAAAGTTCTTGTTGAAACTCAAGGAAAGAATGGACAGAGTTGGACTTGAACTTCCTACAATTGAAGTAAGATTTAAGGATATAAATGTGGAAGCAAAAGTTTATGTTGGAAGTAGAGCATTGCCTACATTACTTAACTTCTTTGTGAATGTTATAGAGGGATGTTTGAATAATCTTCAAATAATTCCAAGTCCAAAGAAACAGTTACATATACTTCAGAATGTTAGTGGAATCATAAAGCCTAAAAGGATGACTTTGCTTTTAGGGCCGCCTGGCTCTGGAAAGACCACTTTGCTTTTGGCCTTGGCTGGAAGACTTGGCAAAGATTTGAAGAAATCTGGAAGAGTAACATACAATGGAGAAGGACTAGAAGAGTTTGTGCCACAAAGAACATCAGCTTATGTAAGTCAATATGATAATCATATTGGAGAAATGACTGTTAGAGAAACACTTGCTTTCTCAGCTAGATGTCAAGGAGTTGGACAAAATTACGAAATGTTGACTGAACTACTGAGAAGAGAGAAGGAATCAAATGTTGAACCAGATCCTGATATTGATGCCTATATGAAGGAAGCAGCAATAGAAGGCCATCAGAACAGTGTGGTCATTGACTATATTCTTAAGATTTTGGGACTTGAAGTTTGTGCTGATATAATGGTAGGAGACCAAATGATAAGAGGTATCTCAGGAGGGGAGAAGAAGCGACTCACTACTGGTGAGATGCTGGTTGGACCTATAAAGGTGTTGTTCATGGATGAGATATCAAATGGTTTGGACAGTTCGACAACTTTTCAGATAATCAACTCAATCAAGCAATCCATACATATTCTAAATGGAACTGCACTTGTGTCTTTGCTACAACCAGCACCAGAAACTTATGAATTATTTGATGATATTATACTTCTCACAGATGGACAAATTGTGTATCAAGGACCAAGAGAAAATGTACTCGAGTTTTTTGAAGCAATCGGTTTCAAGTGTCCTGAAAGAAAAGGAGTTGCTGATTTCTTACAAGAAGTGACATCAAGAAAAGACCAATGGCAATATTGGGCGCGTAAAGATGAACCTTATAATTTTGTCACTGTCAAGGATTTTGCTCGAGCCTTCGAATTATTTCACGTCGGTCAACAACTTGGAGAAGAGATGGCTGATCCGTTTGACAAGTCTAAGTTTCATTCAAATGTCTTGATCAAAAAGAAATATGGTATTAACAAAAAGGAGTTGCTAAGGGCTTGTGCTAGCAGAGAATTGTTGCTTATGAAGCGAAATTCGTTTGTCTACATATTCAAAGCGACACAACTGACTTATTTAGCAACCTTGACAACGATGCTATTTCTACGACCAACGATGCACCACTCCACCATTGAGGATGCAGAAACATACATGGGAGCACTATTCTTCACAGTGACAGTAGCAATGTTCAATGGAATATCAGAGTTAAATATGGCAATCATGAAACTTCCTATCTTTTACAAACAAAGAGATCTTCTTTTCTATCCTTCATGGGCTTATTCTCTTCCACCATGGATCCTCAAAATACCAGTAACTCTCATAGAAGTTGCCATTTGGGAATGCATCTCTTACTATGGCATTGGCTACGATCGAGATATCGGAAGGTTTTTAAAACAGTACTTGGTAGTCCTATGTATTAATCAGATGGCATCTGCGCTATTTCGGTTTATGGCAGCATTAGGAAGGGATATTGTAGTTGCAAACACATTTGGAACATTTTCACTACTTTCAGTTACTGTTTTGGGAGGGTTTGTTATTTCAAGAGATGATGTGAGCAAATGGTTTCTGTGGGGTTATTGGTCGTCACCGTTGATGTATGGACAAAATGCTATTGCTGTGAATGAATTTCTTGGACATAGTTGGAGAAACGTTACTAGTACTAATTCCAATGAAACATTGGGAGTATTAATACTGAAATCTCGCGGATTTTTTCCGCAAGCTTATTGGTATTGGATTGGAGTTGGAGCTTTGATTGGTTATGTTTTTCTATTTAATTCTCTCTTCGCCTTGGCGTTACACTGTCTCAGTCCATTCAGAAAGGATCAAGCAGGCTTATCTCAAGAGAAATTGCAAGAGCGAAATGCTTCAACACCCGAAGAGTTCATTCAATCACAAACACAAAAGAGCTCTTCTGATACAAAGATGGACGAAGCAGTTGTCGAAAACAAAGCTAGCAGTACTGGAAGAAAAGGCATGGTTCTTCCTTTTCAACCTCTATCCCTCACTTTTGATGATATCAAATATTTTGTTGACATGCCACAGGGAATGAAAAGTCAAGGAGTTTGCGAGGATCGGCTCGAACTTTTGAAGGGTGTTAGTGGTGCTTTTAGACCAGGAGTACTAACAGCTCTTATGGGTGTAAGTGGTGCTGGAAAGACTACTCTAATGGATGTTTTAGCCGGAAGAAAAACTAGTGGATATATTGAAGGAAACATCACAATATCTGGTTATCCAAAGAATCAAAAAACATTTGCTCGCATATCAGGATATTGTGAACAATCCGATATCCACTCACCTAATGTTACAGTTTATGAATCTTTGCTATATTCCGCGTGGCTTCGTTTATCACCTGAAGTTGATCGTACAACTAGAAAGATGTTCATTGAGGAAGTTATGGATCTTGTAGAGCTTAACTCATTAAGACATGCACTTGTTGGATTGCCAGGAGAGAATGGACTTTCAACCGAGCAACGCAAAAGGCTTACAATTGCAGTTGAACTTGTAGCAAATCCATCGATAATATTCATGGATGAGCCAACTTCTGGCCTTGATGCTAGAGCAGCTGCAATCGTAATGAGAACAGTAAGAAACACCGTGGACACAGGACGTACCGTGGTTTGCACCATCCATCAGCCAAGTATAGATATATTTGACGCCTTCGATGAGCTTCTACTTTTGAAATCGGGAGGTGAGCAGATATTTGCCGGTCCAATAGGCGACCACGGTTCCGATCTGATCCAGTACTTTGAGGCTATTCAAGGAGTTCCTATGATCAAAGATGGTTATAATCCTGCAACATGGATGTTGGAAGTTACATCAGCAGCAAAAGAAGCAAATCTTAAGGTCAACTTCACTGATGTGTACAAAAACTCCGAACTACACCGGAGAAATAAACAACTGATCCAGGAGCTTAGTGTTTCTTCTCAAGGTTCCGAGGATATATACTTCAATGCTCAGTATTCACAAACTTTTGTAGCACAATGTATAGCTTGTCTATGGAAACAACATTTATCGTATTGGCGGAATACATCCTATACAGCAGTTAGACTCCTATTTACAATCATGACAGGTGTATTGTTTGGCCTGATTTTTTGGGATGTTGGCTCGAAAAGGAGAAAAGAGCAAGATCTATTCAATGCAATGGGATCAATGTATGCTGCTGTTACCTTCATAGGGGTTGTAAATGGTGCCTCAGTGCAACCAATAGTAGCAATTGAGAGATCAGTTTTTTATAGAGAAAGAGCTGCAGGAATGTATTCAGCTTTGCCATATGCTCTTGCACAGGTTATTATAGAGCTACCTCATATCTTGGTTCAAGCTCTTGTATATGGTATCATAGTATATGTGATGATGGGATTTGAGAGGACAGTAGTAAAACTTTTGTGGAATCTCTTCTTCACTTACTTTAGTTTCTTATACTATACCTACTATGGTATGATGACAATGGCCATAACTCCAAATCCACATGTTGCTGGTATATTGTCTACCTCATTCTATGCAATATGGTGCCTTTTCTCAGGCTTCATCATTCCCTTATCTAGAATACCAATATGGTGGAAGTGGTACTATTGGATTTGTCCAGTTGCATGGACCTTGAATGGATTGGTGACTTCTCAATATGGAGACAACATGGAAATACTTGAGAATGGTCAAAGGGTTGAAGAATTTGTGAGGAATTATTTTGGGTTTAAACATGGCTTACTAGGAGAGGCTGCAATTTTTGTGGTTGGTTTCTCAGTGTTGTTTGCATTTATTTTCACCTTTAGTATCAAAGCATTCAACTTCCAAAAAAGATGA 4275 0.3846 MENSDTKTWKNHCMNVFSKSEREDDEEALKCVAMKRILTNACYRKSVETKEEEGKDFDTMQLKLTEKKALLERLVKIAEEDNEKFLLKLKERMDRVGLELPTIEVRFKDINVEAKVYVGSRALPTLLNFFVNVIEGCLNNLQIIPSPKKQLHILQNVSGIIKPKRMTLLLGPPGSGKTTLLLALAGRLGKDLKKSGRVTYNGEGLEEFVPQRTSAYVSQYDNHIGEMTVRETLAFSARCQGVGQNYEMLTELLRREKESNVEPDPDIDAYMKEAAIEGHQNSVVIDYILKILGLEVCADIMVGDQMIRGISGGEKKRLTTGEMLVGPIKVLFMDEISNGLDSSTTFQIINSIKQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVLEFFEAIGFKCPERKGVADFLQEVTSRKDQWQYWARKDEPYNFVTVKDFARAFELFHVGQQLGEEMADPFDKSKFHSNVLIKKKYGINKKELLRACASRELLLMKRNSFVYIFKATQLTYLATLTTMLFLRPTMHHSTIEDAETYMGALFFTVTVAMFNGISELNMAIMKLPIFYKQRDLLFYPSWAYSLPPWILKIPVTLIEVAIWECISYYGIGYDRDIGRFLKQYLVVLCINQMASALFRFMAALGRDIVVANTFGTFSLLSVTVLGGFVISRDDVSKWFLWGYWSSPLMYGQNAIAVNEFLGHSWRNVTSTNSNETLGVLILKSRGFFPQAYWYWIGVGALIGYVFLFNSLFALALHCLSPFRKDQAGLSQEKLQERNASTPEEFIQSQTQKSSSDTKMDEAVVENKASSTGRKGMVLPFQPLSLTFDDIKYFVDMPQGMKSQGVCEDRLELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYIEGNITISGYPKNQKTFARISGYCEQSDIHSPNVTVYESLLYSAWLRLSPEVDRTTRKMFIEEVMDLVELNSLRHALVGLPGENGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKSGGEQIFAGPIGDHGSDLIQYFEAIQGVPMIKDGYNPATWMLEVTSAAKEANLKVNFTDVYKNSELHRRNKQLIQELSVSSQGSEDIYFNAQYSQTFVAQCIACLWKQHLSYWRNTSYTAVRLLFTIMTGVLFGLIFWDVGSKRRKEQDLFNAMGSMYAAVTFIGVVNGASVQPIVAIERSVFYRERAAGMYSALPYALAQVIIELPHILVQALVYGIIVYVMMGFERTVVKLLWNLFFTYFSFLYYTYYGMMTMAITPNPHVAGILSTSFYAIWCLFSGFIIPLSRIPIWWKWYYWICPVAWTLNGLVTSQYGDNMEILENGQRVEEFVRNYFGFKHGLLGEAAIFVVGFSVLFAFIFTFSIKAFNFQKR 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00733 1424 CDD ABCG_PDR_domain2 824 1062 IPR034003 -
Trre2g00733 1424 Gene3D - 138 446 IPR027417 -
Trre2g00733 1424 Pfam ABC-transporter N-terminal 35 129 IPR029481 -
Trre2g00733 1424 Pfam ABC-2 type transporter 490 702 IPR013525 GO:0016020|GO:0140359
Trre2g00733 1424 Pfam ABC-2 type transporter 1153 1365 IPR013525 GO:0016020|GO:0140359
Trre2g00733 1424 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 138 411 IPR003439 GO:0005524
Trre2g00733 1424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 850 1065 IPR027417 -
Trre2g00733 1424 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 827 1079 IPR003439 GO:0005524
Trre2g00733 1424 MobiDBLite consensus disorder prediction 773 801 - -
Trre2g00733 1424 Gene3D - 844 1067 IPR027417 -
Trre2g00733 1424 Pfam ABC-2 type transporter 369 421 IPR043926 GO:0140359
Trre2g00733 1424 FunFam ABC transporter G family member 34 141 445 - -
Trre2g00733 1424 Pfam ABC transporter 855 1007 IPR003439 GO:0005524
Trre2g00733 1424 Pfam ABC transporter 154 337 IPR003439 GO:0005524
Trre2g00733 1424 Pfam Plant PDR ABC transporter associated 707 769 IPR013581 -
Trre2g00733 1424 SMART AAA_5 864 1056 IPR003593 GO:0016887
Trre2g00733 1424 SMART AAA_5 163 388 IPR003593 GO:0016887
Trre2g00733 1424 MobiDBLite consensus disorder prediction 774 799 - -
Trre2g00733 1424 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 3 1424 - -
Trre2g00733 1424 FunFam ABC transporter G family member 40 841 1071 - -
Trre2g00733 1424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 411 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00733 Trre-Chr2 5767881 5775465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00733 865 1039 Calmodulin-binding Proteins AT2G36910 26.087 8.00e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00733 K08711 - gmx:100800368 2331.21