Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00729 ATGGCTAAGAGATCAGATTTTGCACAGAAGCTTCTCGATGATTTGCGCCTAAGGAAAGAACGAATGGCTACTACTACATCACATTCTCACAACTCAAACCAATCCCGCCATTTGCCTATAGATGCATATGCATACACCAAGCAAACCTACAGAAATGGGGAGATGGTAAATATGTCTAGCAGAAAGCAGAGATCTGTAAAGAGCGGGGGAAACTCGTCAAATCAGATTATTATTCCATACGGGAAAGAGCATAATGGAGGGAAACTAAGAAGAGCCGATTTGTCTTACACCAATTCAATTTTGGGTTTCCTTCACCAAATTCAAAGGGGAACAACAATGGATAGAGGAAGCAACTTGGAAAGGCAACTAGCTTCAACTAGCCAAACCCTCTCTCTTGTGCAGATAAATGAGATATCAAAAGGTGCACACAAACTAAACCACATATTGAGAGCTTGTTTCTCGAATGGTGTTAATATGGATACTTATTCATTCAATTTTGCAAAGGAACTATTACAAGGAGCTATTGATTTGGAACAATCCCTCAGGATGCTAGTAGACCTGCAGAAAAGTTCTACCTCGCAAGCGCAGAACAAAAATCGAATCACACTATTAGAAGAGAAGGAGGATGAGGAGGAGGATAGGAGAATGGAGAAAATGCAACTGGCACTTCCAACTTTCTCGTTTGACAACAAGATGCAGAGACCAATTACCATCACTAACTCTAAGGAAGCCAGAAAGATAAAAGATTTTCAGCAGAAACAACGAATATCAACTAAAACTAGTGGAGCTGCTGACATTTCAAACCAGACGGTCGACAAGGGAAGGATTCCAAACGTAATAGCCAAACTAATGGGGCTGGAAAACCATCCCGAGAAGGACTCGAGTAATAATAGTAATATTGCATCATCCAAGCACTCTGCCAAAGGAAGCAGCAGCACTACACTGAAGAGCAAACAAATAGACAATTTGATCAAAAACCAAAAAGTGGCTGCTCGATCCTTCAAAAACCTGACTTTTGGTGGTCCAGATACAAATTTGGTCCTCGAAAACCAAAAGGCTACCTATTATTCTGAGTCTGAGGTGGCTGGAATAAAAGCATTGAAGGGCTTTGACAAGGCCAGCATCATCAACGGTTCTGCTCGTCAAAACTATGTTGAGGTGATGATGGGAAGGAAACAGGATCACCCACATAACAGTGGCACGTTGAAGGGAAGAAGCACCAATGGCAATGATGTGGGTCAAAATCTAAATAATATGCATGAAAGAAGATCCCAAGTTACAAACAAGCACATGCAGATTGCAAAAGAAGAACATACAGTTACAAACAAGCACATGCAGATGAACAATGAAAACAAGTCTCGGGATCATCTCGTAGTTCAAAAGTCAATACTCTCCACAGGTGGTGGAGGGAGTGAAATGACACCCAAGAATTCACCAAAACAATCCACCAATAATGTTCAGAAGAAGAAAAAGAAATCATCCATAAACCAACCCACACCATCCAAGAAATCAAGTGATGATCATAATCTAGTCGCATCCAATGAGAAAGTAAAAGAAATTATTAATAGGAAGAAGAAGTCCTCCCCAAGATATCCAGAATTTGAACGAGCTAATGGGAGGCAAACACTCAAGGATCATAAACACGCGACCAGCAACAAAATAAAGCCTGAAAAGATTGAACAAATTTTGAGTAGAAGTAGACAGGAAGCATGTGATAGAGCATCTGGCAAATTCAATGTCTTAAATGGAGCAGAGAAAAAAAGGTTTAGCATGTTCGTTGAACAGGAACTGCTTCCTCCTACTACATTATACAATTCTGGCGGTGGTGGAGATTTACAAGAACCGTCCAATGATTTGAAATATCAAGCTGTGCAACGGATAGCAATCAATTTGCAAGATCAAGCTGTTCCTGAGGCACCACATGAAGGATTCAAGACTAGTGAAGTTGAATATCATAAAAGTAAAACAAACGGAGTTCTGGAAGACAGAATGGTTGTGAAACTACAGGATCAAAATATAAGCATCCAACAACCACTAACAGAAAGTGAAAATTGCCTCAAGTGGATTTTGGTCATGAGTCAATTATTCGTCAACACTGCAGAAGCACTTTTCAGACTAAACATCCCGTTTGGTATTCTTCAAGGTGGTCGTCAAGACAGTCAAGACCAAAGTAGCAAACTCATATTAGATTGCGGCTATGAAGTGATGAAAAGAAAGGGGATACGGCAGGAACTCAAAGCTCATACTTGTTCAAAGATATCATCAATCACTAGTACTTTTAACTTAATAAGATCCTTAGATGACTTGGTTAGGAAGCTGAATGAGGACATGGAGAAGCTTAAATTCTACGGAAGGAAAAAAGGTAGTCAAGTTGACGTCGAAGATTACCTGCCTAAGATGCTTGAGCATGATGTCTATGATAAATGTCCAGACATAGACTGCATGTGGGATTTGGGTTGGAATGATGAGACATTTGCATTTATCGAAAAATATGATGTTATAAGGGATACAGAAAAGCATATCCTTAGTGTACTTCTCGATGAGATCACCAAAGATTATTGCACGTTCAAGGAGGATTGA 2580 0.3996 MAKRSDFAQKLLDDLRLRKERMATTTSHSHNSNQSRHLPIDAYAYTKQTYRNGEMVNMSSRKQRSVKSGGNSSNQIIIPYGKEHNGGKLRRADLSYTNSILGFLHQIQRGTTMDRGSNLERQLASTSQTLSLVQINEISKGAHKLNHILRACFSNGVNMDTYSFNFAKELLQGAIDLEQSLRMLVDLQKSSTSQAQNKNRITLLEEKEDEEEDRRMEKMQLALPTFSFDNKMQRPITITNSKEARKIKDFQQKQRISTKTSGAADISNQTVDKGRIPNVIAKLMGLENHPEKDSSNNSNIASSKHSAKGSSSTTLKSKQIDNLIKNQKVAARSFKNLTFGGPDTNLVLENQKATYYSESEVAGIKALKGFDKASIINGSARQNYVEVMMGRKQDHPHNSGTLKGRSTNGNDVGQNLNNMHERRSQVTNKHMQIAKEEHTVTNKHMQMNNENKSRDHLVVQKSILSTGGGGSEMTPKNSPKQSTNNVQKKKKKSSINQPTPSKKSSDDHNLVASNEKVKEIINRKKKSSPRYPEFERANGRQTLKDHKHATSNKIKPEKIEQILSRSRQEACDRASGKFNVLNGAEKKRFSMFVEQELLPPTTLYNSGGGGDLQEPSNDLKYQAVQRIAINLQDQAVPEAPHEGFKTSEVEYHKSKTNGVLEDRMVVKLQDQNISIQQPLTESENCLKWILVMSQLFVNTAEALFRLNIPFGILQGGRQDSQDQSSKLILDCGYEVMKRKGIRQELKAHTCSKISSITSTFNLIRSLDDLVRKLNEDMEKLKFYGRKKGSQVDVEDYLPKMLEHDVYDKCPDIDCMWDLGWNDETFAFIEKYDVIRDTEKHILSVLLDEITKDYCTFKED 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00729 859 MobiDBLite consensus disorder prediction 56 79 - -
Trre2g00729 859 MobiDBLite consensus disorder prediction 290 316 - -
Trre2g00729 859 MobiDBLite consensus disorder prediction 248 268 - -
Trre2g00729 859 MobiDBLite consensus disorder prediction 254 268 - -
Trre2g00729 859 MobiDBLite consensus disorder prediction 464 507 - -
Trre2g00729 859 MobiDBLite consensus disorder prediction 464 512 - -
Trre2g00729 859 MobiDBLite consensus disorder prediction 56 82 - -
Trre2g00729 859 PANTHER OS01G0228800 PROTEIN-RELATED 428 854 - -
Trre2g00729 859 MobiDBLite consensus disorder prediction 392 411 - -
Trre2g00729 859 MobiDBLite consensus disorder prediction 288 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00729 Trre-Chr2 5733461 5736846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00729 1 297 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 36.875 4.08e-34 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00729 - - mtr:11406578 1259.2