Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00722 ATGAATATTGGATTAAAGTCTTATAACCGTAATAACAATAACAATAACAGTGAAAATCAAATCCTCAAAGATGATGCCGGTAGCCAATACAGTCTTACCGGAATCATGCTTCCACCTCTCGGCGCCGCCACCAACAACCGCACCGAGCTCCCACGTTGGATCATCTCCCCTAACAACCGTACTTATCAACAATGGTGCAAGTTTTTGATGATATGGGTTTTCTACACTGCATGGGTGTGTCCTTTTGAATTTGGGTTTCTTAAGGCATCAAAAGGTCCAATCACTTATGTAGACAACATTGTGAATGGATTTTTTTTTGCTGACATTGTTCTTACTTTCTTTGTTGCCTATCCTGACAAAACTACTTTTCTACTTGTCGGCGATCAAAAGAAAATCGCCAAGAGATATATGAAATCCTGGTTTTTCTTTGATTTGGTCTCTATCGTTCCGTATGAATTGGTTAAGAACCGCTTGCCAGCATCACTCCAGACATATGGTTACTTCAATATTCTTCGCCTTTGGCGCCTTCATAGAGCCAGTGCTATGTTTTCGAGGTTAGAAAAGGATAGGAATTATAACTATTTTTGGGTGCGATGTTTAAAACTTATATGCGTAACACTGTTTTCGGCGCATGTAGCAGCGTGTTTTTTCTATTTTCTTGCTACAGGACACAACCATAAAAAAGTTACATGGTTATCACTTGTTTCAAATGGTTCTGACCTAAGTATGTGGGATGGTTATGTAACATCATTATATTGGTCCATAGTGACTCTTTCATCAGTTGGTTATGGAGATCTGCATCCTGTTAGTACAGATGAAATGGTTTTTTGCATTTTTTACATGATGTTCAATTTTGGACTTTCTGCATATCTTATAGGAAACATGACCAATTTGGTTGTTCATTGGACACAAAGAACTAAGAGATATAGAGATACTGTCCAATCTGCATCGAATTTTGCTCATAGGAATCAGTTACCTAAACGTTTGCAAGATCAGATATTTTCTCATTTTCATATGAAGTACAAAATAGATTTGGAAGGGCTGGAACAACAAGAAATAATTGGTTCCCTTCCGAAAGCTATTCAGTCGAGCATCGCACACCACCGGTTCTTTGATGTTATCAAAGAAGCATACTTGTTTAAGGGAGTGTCAAATGACCTGCTATTTCAACTGGTGACAGAGTTGAAGGCTGAGTTTTTTCCTCCAAGAGAAGATGTAATCTTGCAGAATGAATCACCAACTGATTTTTATATATTGTCCATTGGATCTGTTGCTTTTAAAGAAATAAAGTCATCTCAGGTTTTTGGAGAAATAGGAGTGCTATGTTACAGGCCACAACTTTTTACCGCTCGGACCAAGCAATTAAGCCAAATCTTGCGTTTGAGTCGAACATCATTTCTAAACATTGTTCATAACAATGTTGAAGACGGAACAATTATCATGAACAATTTTCTCAATCATGTGCACGATTTAAGTTTAACGTACCCTATCATGGTAGGATTTATGGCTGAAATACAGACATATTTGTCAACAGGCAAAATAGATTTGCCTATAAGTTTAGTATTTGCAGCTAACAAAGATGATGATATGTTGTTGCATCAATTGCTAAAAAAAGGCTCAGATCCAAATGAAATAGATCACAAAACTGGAAAGACACCACTGCATGTTGCAGCTTTTCAAGGCAATGATCATTGTGTGGCTTTGCTTCTAGAATTTGGGGCTGATCCCAACATACAAGACTTTGAAGGAAATATATCACTATGTGAAGCAATGAAAGGAGGGCATGAATTAGTGAAAAAACTACTTATAGACAATGGTGCAAATATATCTTATGCTAATGTGGCTCCTTTAGCGATCTTCGCTGTTGAGAAAAATGACATTCAATTGCTAAAAGATGTTATGAAACTTGGTGGTGATATTGTGAAAAACTCCACAAAAGAAGGAACCACTGCACTTCATGCTGCTGTATGTGAAGGAAATTTTGAAATAGTTAAGTTTCTTGTAGAACAAGGAGCAAATATTGATAAGCAAGATAAAGTCGGTTGGACTCCAAGAACTTTAGCAGATCATCAATGCCATGAAGAGATAAAAAATATGTTTAAAGAAATTGAACAAGATGATAAAATTTCCTATGTTATTCCTCCAATTCCAAATGAAAATGGAGGGTCAATTATTGCTAAGTCTTACAGTGACCCTTCTTTGCTAGCTATGTCTCAAGGTGGTAGCTTCCGACCTAATCAAGAGTTGACATCTTTGAATAATCATCAAGGAAGAACGGTTAGCCCTTTTAGGAATTTTGTTTTTGGAATGAATGCAGCGGCTAATCGAGATAAATATAACTTTCCTGCATCTCAAGACAGTTCAACTACAACTTCTACACGAGCGAATGAATTGCGGATTAGAGTAATTCTTAGTCATGAAGAAAAAAGTGAACATCGTAAAAGGCTTGTTTTTCTACCACAGTCCCTTCAAGAGCTGCTAGATGTTGGTGCTCAAAAGCTTGGCTTCTCTCCCTCTAAAATTTTGACTGAAGATGGAGCTGAAATTGAAGATATTAACTTGATTAGAGAGGGTGATCATCTTATTCTTGTATGA 2595 0.3699 MNIGLKSYNRNNNNNNSENQILKDDAGSQYSLTGIMLPPLGAATNNRTELPRWIISPNNRTYQQWCKFLMIWVFYTAWVCPFEFGFLKASKGPITYVDNIVNGFFFADIVLTFFVAYPDKTTFLLVGDQKKIAKRYMKSWFFFDLVSIVPYELVKNRLPASLQTYGYFNILRLWRLHRASAMFSRLEKDRNYNYFWVRCLKLICVTLFSAHVAACFFYFLATGHNHKKVTWLSLVSNGSDLSMWDGYVTSLYWSIVTLSSVGYGDLHPVSTDEMVFCIFYMMFNFGLSAYLIGNMTNLVVHWTQRTKRYRDTVQSASNFAHRNQLPKRLQDQIFSHFHMKYKIDLEGLEQQEIIGSLPKAIQSSIAHHRFFDVIKEAYLFKGVSNDLLFQLVTELKAEFFPPREDVILQNESPTDFYILSIGSVAFKEIKSSQVFGEIGVLCYRPQLFTARTKQLSQILRLSRTSFLNIVHNNVEDGTIIMNNFLNHVHDLSLTYPIMVGFMAEIQTYLSTGKIDLPISLVFAANKDDDMLLHQLLKKGSDPNEIDHKTGKTPLHVAAFQGNDHCVALLLEFGADPNIQDFEGNISLCEAMKGGHELVKKLLIDNGANISYANVAPLAIFAVEKNDIQLLKDVMKLGGDIVKNSTKEGTTALHAAVCEGNFEIVKFLVEQGANIDKQDKVGWTPRTLADHQCHEEIKNMFKEIEQDDKISYVIPPIPNENGGSIIAKSYSDPSLLAMSQGGSFRPNQELTSLNNHQGRTVSPFRNFVFGMNAAANRDKYNFPASQDSSTTTSTRANELRIRVILSHEEKSEHRKRLVFLPQSLQELLDVGAQKLGFSPSKILTEDGAEIEDINLIREGDHLILV 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00722 864 ProSiteProfiles KHA domain profile. 801 864 IPR021789 -
Trre2g00722 864 SUPERFAMILY cAMP-binding domain-like 304 487 IPR018490 -
Trre2g00722 864 Coils Coil 5 25 - -
Trre2g00722 864 SMART cnmp_10 379 485 IPR000595 -
Trre2g00722 864 SUPERFAMILY Ankyrin repeat 495 703 IPR036770 -
Trre2g00722 864 PRINTS EAG/ELK/ERG potassium channel family signature 98 108 IPR003938 GO:0005249|GO:0006813|GO:0016020
Trre2g00722 864 PRINTS EAG/ELK/ERG potassium channel family signature 75 82 IPR003938 GO:0005249|GO:0006813|GO:0016020
Trre2g00722 864 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Trre2g00722 864 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Trre2g00722 864 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Trre2g00722 864 Gene3D - 516 702 IPR036770 -
Trre2g00722 864 ProSiteProfiles Ankyrin repeat region circular profile. 549 580 - -
Trre2g00722 864 FunFam Potassium channel KAT2 368 492 - -
Trre2g00722 864 Pfam Ankyrin repeats (3 copies) 590 678 IPR002110 GO:0005515
Trre2g00722 864 Pfam Ankyrin repeats (3 copies) 521 580 IPR002110 GO:0005515
Trre2g00722 864 ProSiteProfiles Ankyrin repeat profile. 549 581 IPR002110 GO:0005515
Trre2g00722 864 Gene3D Jelly Rolls 368 488 IPR014710 -
Trre2g00722 864 PRINTS Ankyrin repeat signature 663 677 IPR002110 GO:0005515
Trre2g00722 864 PRINTS Ankyrin repeat signature 550 565 IPR002110 GO:0005515
Trre2g00722 864 FunFam Potassium channel KAT3 64 301 - -
Trre2g00722 864 PANTHER POTASSIUM CHANNEL AKT1 28 863 IPR045319 GO:0005249|GO:0006813
Trre2g00722 864 ProSiteProfiles Ankyrin repeat profile. 647 679 IPR002110 GO:0005515
Trre2g00722 864 Pfam Ion transport protein 64 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Trre2g00722 864 Gene3D - 62 300 - -
Trre2g00722 864 SUPERFAMILY Voltage-gated potassium channels 58 300 - -
Trre2g00722 864 ProSiteProfiles Ankyrin repeat profile. 582 614 IPR002110 GO:0005515
Trre2g00722 864 Pfam KHA, dimerisation domain of potassium ion channel 800 863 IPR021789 -
Trre2g00722 864 CDD CAP_ED 379 481 IPR000595 -
Trre2g00722 864 ProSiteProfiles Ankyrin repeat region circular profile. 647 679 - -
Trre2g00722 864 Gene3D Helix hairpin bin 301 367 - -
Trre2g00722 864 SMART ANK_2a 515 544 IPR002110 GO:0005515
Trre2g00722 864 SMART ANK_2a 647 676 IPR002110 GO:0005515
Trre2g00722 864 SMART ANK_2a 549 578 IPR002110 GO:0005515
Trre2g00722 864 SMART ANK_2a 582 611 IPR002110 GO:0005515
Trre2g00722 864 ProSiteProfiles cAMP/cGMP binding motif profile. 379 487 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00722 Trre-Chr2 5696263 5701299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00722 12 863 Ion Channels AT2G25600 51.088 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00722 K21867 - gmx:100809960 1021.15