Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00718 ATGGCAAAGAAGAAGAACCCCATGGTGTTTATGAATGTGTCTATAGATGGGGATCCGGGTGAAAGAATGGTTTTTGAGCTTTTCTATGATGTTGCTCCAAAGACTGCTGAAAATTTTCGTGCACTGTGTACCGGAGAAAGAGGAGTCAGTCCCAATACTGGAAAATCACTGCACTATAAGGGTTCTTTCTTCCATCAGATTGTAAAAGGCTCTATTGTTAGGGGTGGTGATTTTATCAATCGAAATGGGACTGGTGGAGAAAGCATATACCCCAAGTTCCCAGACGAGTCTCCTAGGCTAAAGCATGATTCTCCTGGCCTTCTATCCATGTCAATTGCTGATCGTGACACTCTCGGTTCACATTTTATCATCACTTTGAAAGCTGATCACCATCTTGATAGGAAGTATGTAGTTTTTGGCAAGCTTGTGCAAGGTTATGATATCTTGAAAAAAATTGAAGATGTAGGCGATGAAGAAGGACTCCCAACCGTAACTGTTAAAATAATTAATTGTGGTGAACATAATGAGGATACAAAGAAGACACACAAGTTAAAAAGTGGAAGGAACGGAGCTTCTGAAGCCAATAGTCATGAAGTGCGGAGGAAGGGAAAGCATAAGAAATCTTCAGGACACCGAAGGAAAAAGAGAAAACATTACTCATCAGAATCAGATAGTTCCTCAGATTCCGACATTGAATCTTCATCAAGTGAATCTTCATCAAGTGATAGTGACTCTGACTCAGATGTGTCCTCGTCATCTTACACAAGTTCATCTAGTGATGACAGGCGGAGGAAAAGAAAGAGATCTAGGAAAGATAAACGTAGACATAGAAAAAGGAGAGATAAACGTCGAGAAAAGCGGCGAAGGAAACAAGATAAGAGATCAAAACGTAAATCAAGGGAATCAAGCAGTCATGCGGATGCAGATAGTGCAAGTAAGAGTGACGATAGCTCCAATGGCAAAGGTCTTGATACTCAGGGGAGAATTCAGAAGCATAAAGATCATTCGCAGAAAGATGCTGAAGTCCAGTCATCCTCAGTTTTGGAGAAAGAATTGCCTCCCATGAGTCATAAAAGGAGGGAGGTGGATGGCATGCTAGGTGAGGAAGAATTCCCAAAAGAAAATGGAGCACAGCGTAGCAACGGCATTGGGGTCAACTACAGACTCGACAGAAGTGAAGAGAGGCAGCCTGATGTGATGGATGATAATCCAGGAAAATCTAGGATTCGAAGCATGAGCCCTAAGCAAACTGTGAGCAAGAGTATGAGTATTAGTCCCAAGTGTGTGTGCAAAAGCCCGAGCATTAGTCCAAAAGGGAGGTTGAGCAGAAGTCCAAGTGGTAGTAAGAGCCCACATGCTCCATCACAGAGGAGTTTGAGCAGGAGTCCTGTTAGAAGCATCAGCAGAAGCCCCGTGAGAGGGAGGAAGGGGAGAAGTATCAGTAGAAGCCCTATAAGAACACACATTCATAGGAGTGTCAGCAAGAGCCCTGTGAGAAGTCCTGACCGTAGAAGTTTTAGCAAGAGTCCTGCTAGATCTGTTTCTCTAAGCCGCAGAAGTAGAAGTTCTGCTAGAGTATCATCACGAAGAACAGTCAGTAGGAGCCCTGTGAGAATGTCAAGAAAGAGCATCAGCAGGAGTCCAGTTAGATCTTCTGCTAGAAGCCTCAGCAGAAGTTCTGGCCGAGTTCCTTTGAGAAGCATTAGCCGAAGTCCTGTCAGAGTGGCAAGCAGGGGCAATCACCGCAGCTATTCCAGGAGTCGTAGCCCTATTCGTAGTAGAGAAAGGACACCTCGTGAAAGGAGTCTGTCAAGGAGTGTGTCACCTGATGCTTCACCAAAACGTATCAGGAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGATACAGAACACCCTCTCAGTCTCCTGTGAGGTACCGCCATAATGGAAGGAATGACCGGGACAGATATCCAGGATACCGAAGGTACTCCCCTAGACGTTTTAGGAGCCCACCACCACGGAGAAGAAGTCCACCAAGGTACCGAAGTAGGAGAAGCAGGACACCATCTGTATCACGCAGCCCACCTTACCGAGCACGTCGGTATAGCCCAAGCCTCAGCCCAGTTCGCAACCGCTCACCTGCTCGTAAGGATAGACGCATATCATTATCTCCCAGCAGGAGTCCATCTCGATCCAGGTCCAGGTCTCCAGTGGAATCACAGTCTCCAAAAAAAGCAAGCAGAGTTAACAGGTCAAGATCTTCGTCTAGAAGCTCAGATGGAAAGAAAGGCCTGGTCTCGTATGGAAATGGCTCTCCGGATTCAATTCATAGGTGA 2325 0.4568 MAKKKNPMVFMNVSIDGDPGERMVFELFYDVAPKTAENFRALCTGERGVSPNTGKSLHYKGSFFHQIVKGSIVRGGDFINRNGTGGESIYPKFPDESPRLKHDSPGLLSMSIADRDTLGSHFIITLKADHHLDRKYVVFGKLVQGYDILKKIEDVGDEEGLPTVTVKIINCGEHNEDTKKTHKLKSGRNGASEANSHEVRRKGKHKKSSGHRRKKRKHYSSESDSSSDSDIESSSSESSSSDSDSDSDVSSSSYTSSSSDDRRRKRKRSRKDKRRHRKRRDKRREKRRRKQDKRSKRKSRESSSHADADSASKSDDSSNGKGLDTQGRIQKHKDHSQKDAEVQSSSVLEKELPPMSHKRREVDGMLGEEEFPKENGAQRSNGIGVNYRLDRSEERQPDVMDDNPGKSRIRSMSPKQTVSKSMSISPKCVCKSPSISPKGRLSRSPSGSKSPHAPSQRSLSRSPVRSISRSPVRGRKGRSISRSPIRTHIHRSVSKSPVRSPDRRSFSKSPARSVSLSRRSRSSARVSSRRTVSRSPVRMSRKSISRSPVRSSARSLSRSSGRVPLRSISRSPVRVASRGNHRSYSRSRSPIRSRERTPRERSLSRSVSPDASPKRIRRGRGFSERYSYARRYRTPSQSPVRYRHNGRNDRDRYPGYRRYSPRRFRSPPPRRRSPPRYRSRRSRTPSVSRSPPYRARRYSPSLSPVRNRSPARKDRRISLSPSRSPSRSRSRSPVESQSPKKASRVNRSRSSSRSSDGKKGLVSYGNGSPDSIHR 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00718 774 MobiDBLite consensus disorder prediction 226 257 - -
Trre2g00718 774 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 173 IPR002130 GO:0000413|GO:0003755
Trre2g00718 774 MobiDBLite consensus disorder prediction 388 405 - -
Trre2g00718 774 Gene3D - 1 174 IPR029000 -
Trre2g00718 774 MobiDBLite consensus disorder prediction 437 467 - -
Trre2g00718 774 MobiDBLite consensus disorder prediction 297 314 - -
Trre2g00718 774 MobiDBLite consensus disorder prediction 721 761 - -
Trre2g00718 774 MobiDBLite consensus disorder prediction 507 566 - -
Trre2g00718 774 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 181 - -
Trre2g00718 774 MobiDBLite consensus disorder prediction 326 340 - -
Trre2g00718 774 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Trre2g00718 774 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
Trre2g00718 774 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 149 IPR002130 GO:0000413|GO:0003755
Trre2g00718 774 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 121 IPR002130 GO:0000413|GO:0003755
Trre2g00718 774 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Trre2g00718 774 MobiDBLite consensus disorder prediction 643 658 - -
Trre2g00718 774 MobiDBLite consensus disorder prediction 471 493 - -
Trre2g00718 774 Coils Coil 772 774 - -
Trre2g00718 774 MobiDBLite consensus disorder prediction 611 627 - -
Trre2g00718 774 MobiDBLite consensus disorder prediction 177 774 - -
Trre2g00718 774 MobiDBLite consensus disorder prediction 200 218 - -
Trre2g00718 774 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 173 - -
Trre2g00718 774 MobiDBLite consensus disorder prediction 588 603 - -
Trre2g00718 774 MobiDBLite consensus disorder prediction 409 430 - -
Trre2g00718 774 SUPERFAMILY Cyclophilin-like 4 178 IPR029000 -
Trre2g00718 774 MobiDBLite consensus disorder prediction 263 296 - -
Trre2g00718 774 MobiDBLite consensus disorder prediction 352 375 - -
Trre2g00718 774 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 172 IPR002130 GO:0000413|GO:0003755
Trre2g00718 774 MobiDBLite consensus disorder prediction 663 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00718 Trre-Chr2 5658692 5664498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00718 25 169 U-box Gene Family AT5G67530 38.514 6.08e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00718 K09566 - cave:132189182 631.713