Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00680 ATGAAGACAGGAAAGCTAATTAATCATAACTTACAAAACTTGTCGGACACTTTTCCTGATATTTCTTCTGGGGCAATGGTTGGTACTAGTAGTGGTAGTAATATTGTATTTCATGATATTCAGAGCAATAATACTGCTTCTTGGCCAACATTTCCTGGTGGTGAGAGGGCAAGGGAGTCTTATTCTTATAGAGGGCAATCCTGTGTTACAATCCCTGCCTCTGGTCTAAATTTTTGCACCCCAAATATGCAACCGACATCAAGAACGGCTTTTGAATGGTTTTCAGCTAACTATGCAACTCCTTCTGTGAGTGGGGGTCCTCGTGTCTTCTGCATGGGAAAAAGTGGCCATCTTCTTATAAGCAATACAGGGCTTCTTGGCATCGTTTGCTCATGTCATTGTTGCCACATGTCTATACTTAAGTTTTGTGAGCATTCAGGGTTACACAGTGCCAACCCAGGGGATGCTGTTCGTATGGAAAGCGGAGAGACCATTGCACAGTGGCAGAAGTTGTATTTCTTAAAATTTGGGATTAGGTCTTCGGAAAATGAGAGTGAATGGGACTGGCCAGAAGTATTTTCAACAACAGGCAATCTGATGAAATCCAATGCATCTGATATGTCCAAGAGTGATCTGTCACATAATTTGAATTCCGCTGCAGTCACATTAAGAAAACAACCGATGCCAAACCAGGATGGTTGCAACATTCCACTCAAGGGTTTAAACGCTTTTATGCAGAACAACCTGTATGATCGGGTGAAAAGCCAGTTAATGGAATCTAATATGGCTATTTTTACACCTTCACCAAACTTTGTTGGAGTTCAATTGAATGATGGTTGTCAGCCTATACCTCCTTTCCTTGATTCTTTGAAAAGGGATGAAAATTTGTCAATTACCCAGTCTGCACAAATTCCAACAAGCCATAAAGACCATGCATGTATCAAAAAGAAGAATGTAGAGACTGGTATACTAGACAAAGATGCAACTTCCTCTAACATCGAGCTTAGGCTTGGTCAACCACATCAGGCAGGAAATCCAGTTGCATCATTTGTAGAATCACCATTGTTTACCTTTGCTAGTTCTCCAAAACTGCATTTCCTGAAGCAGATGACTAATAATCTTAGCAGGGAGGAGAAAATGCAGAATAATTTTAGTCATGCTGCCGGTTCATCCAAAATGCTTGAGGAACAACCTCTACTTAACCCCCAATACTATATGCCTGGATGTAGTAATATTTCAAATGCTGTCACAGCTAGTTCACAAACTGACAATGTGGCCACGAGTTCATTGTTTTTACCATTTCCACAATTTACTTCTCAACACAAGGGTAATACAAATGCAAGTGGAAATTTGGTGAATGATGGTAGCATGCCCAAGAACTTGCATTCTGAATATGGTACCGCACAATTTGGTTCTTCTAATGTTCTCTTGAATAGTAATGGTCAGAAAGGAAGGCAATCAAATGATTCTGCACCAGAATTCAATAAATATTTGGACAATGATAATGGTGCAAGGGTTGGTGAAGATTCCTGCACCAAAATAAATTCTGGATTTGAAGTAAATCAGTTCATGGAATTTGGCTCCATCAGAAGAACTGTTGGCGGTAGTGGTAGTTGTACTCCTATTGTTAACGGAAAGATATATGAATCAAGCTTTGCATCAGATACATCTGTGGGTGCAAATGCTTTGCAAGGTTCAAAAAATGTATTTTCTTTTGGACGAAGCAATCACTTGACTTTGGGGACAGCTGTTCCATTTGAAGGAAATTTGACGAGCCTTCCCTATCTTGTTTCAAGCTCTACATCAAATCAGAATTCTACACTGAAACAACGGGGTGTTAATATGGATACTTACATGCTTGATGAAAATATGAGGTTGCTTGCATTGACACAGATGCTGGAGTTATCTAAGCAACAACAAGCTTTGTATTTTCATGATATGAATCAGAAACTAGGGAAATCAAATATTTCAAAACCTCAGAACTATATATACAAGGCTTCAGTACCTGAGCCGGGTTCTTCTGGTGCATCACTGAAATTGGCCCAAAATAGGGGGACTTGTGGAAATCTTGAGATTACTGATGGTTTGAACAGCTATTGTGATGTCTCTGCCTTAATACCAATACCTTTACAATCCAAAGAAAAGGAATCACAATGTAAACATTCCTATGATCTTCAAAATGATGGTCCGTCTTTGAGCCTTGGAATGAACAATACCAGATCAAGTGAAAAATGCTCTGAGCAACAATCAGATCTACATTTTGCAGGCATATATGCTAGTGCTGCTTGGGAAAACTGTTCCAGAAACAATGTTTGCACTGGAATTGAACCCTCTCGCGATATTCTAAAAGAAAAGTTTGCAGATGCCAATGGTGTGACCTTTTTGAAGATAGCTTCAGAGTGTAGGAGAGATCAGAAGGCTTCAAAGAATAAAAATATCTACTTTGAGCTAAGTGGATTAGATGGTCGCAATACAGTAAAAACTGGCTCCCATACACCTCAATGGAGAGATGTGCCAAGTAGGTTCAGGAAACCATTATGTGATGCAACAATTTTAGATCAGATGGCCACTGTATTGGATAGGGAAGGAGAAGACAGTGTCCAAGTGGGAAACATTTCCACCAAACGTTTGAAAAAAATTATTGATAGGGAAGATTTGTTGAAAGAGCGGGGAAATTTTAATGTTTCTTCTGGATGTTCTGCTCCTGTTGTTTCTCAAGCCTCGGGGATGGAGGTGAACATGGTTGATTCTTGTAATGTAGATACTACATATGCTGGTTGTATTGAGAACCTTGTGCTTGATGAGGGGTCAGGAATTGATAAAGGCTGGTCCTCTGATTTGGTTGAAAGTGAAAGAAGTGCAGAGTATGCAGGCTCAACCAGTGGGTGTGACTTGAAAAAAGGTTATATGAGAGTCTTAAATGATCAACCATGCCGGAGTCTCCTTGACGATATTAAACTGTTAGATTCTTTGATTTGGAAGAAAGGGCAGGACCAAAATCATATAATGCTTAGTGTTAATTGTAGAGCCAGTGAATCTCAACAAGGCAAGAAGGGCTTCAAAGGAAAAGAGCGAAAGAGAAACAAGGCGAGAGTTCTAGGTGCTTCATTGCTTCCTGGAATCTCTTGCTCATTGGATAACCAGATTGGAGAAAGTCCTGGAGCTTTTGATCCCCCTTCTAGTTTATCTGAAGAAATGCGATTGTACTTTTCATCTACCCAACAAAGATCATCTACCAAGGTTTCTATTGTTCAACCTATAACTAGTCACGGACCCTCTTCATTGTCATCTAAATTTTGCTCTTGTAATAATAATAATCCAAACAAACATCACAGAGATGAAGATAGCTGCGAGTCAGAATCAAATTCTCATGCCGAGTTTCACACATTACCTGGAATTTCTAGAATAAAGAAATCAAGGAAGGTTTTCACTTCTGATTGCTTTGGGAATTTCCAAACGGAAGTACCATACTATGATGAACCAAAAAATGCTACGCAGGTGTTATCCTCTAGCAGAAAAGGAAGCGCTCATAGAATCAAAAGGCCAGTAGTGTGTGGAAAATATGGGGAAATATCTAGTGAATTATCAATTACAGAAGTACCAAAACCAGCAAAAATTGTCCCTCTTAGCAAGGTTCTTAGAAATTCCAAAAGATGTATGATCCCTACAACTGAAACACCTGGTCTAACAGCAAAAAGAAAAAGGAGGACATTGGGCCTTGGAACAAGTTGGGGGCATAGCTGTGCGAAATCTGGTTTAAAAGCTAAGAAAGATAATGAATCCGAATATACAATAATTTGCGATGAAACAAATTCCGACGTGTCTATGGAGGGTTTTGAGAGAGCCCACAAGCAAACTGTTGTTTACAAAGGGAAGAGAGATACCAAAGAAGGGCAGGGTGATATTTTAAGCAGAGCTGATTCTTCATTGAAGGTGAAGAGCAGAGAAATACAGAAACAGCGCAGCATTAACGAAATCATTACTGAAGAAACCCAAATGCAGGATATGTTGAAGTATGCAGAAGATCATCAGCTTAGTTTGTGTAACAAAAGAAGTAACATCTCAGTTCAGGAACACACAAATCTGTCCATCACCAATTCAGATTCCTTCTGCGGTGTCTGTCAAAGGTCAAGCAATGACGAAGCTAACATTTTATTGGAGTGTAGTAAATGTCTAATTAAAGTTCGTCATGCTTGCTATGGTATTTCAGCATTACCTAAAAGAGGTCAAAGGTGTTGTAGACCGTGCCAAATAAACTCAAAAGATATTGTGTGTTCAATTTGCAATCAATGGGGTGGTTCGTGTATAGAGTGCAGGAATGTTGATTGCTCTGTCAAGTTTTATCCTTGTGCTCATCAGAAGAGCCCGTTGCAAATCGAAACTGATGGAATTAATGATGAGAAAGTTTTTTTTTATCGAAGATCTGTGCTTCATGGTATTGGCCCTGAATGTCAGTCTACATATGATTCTACTGATGAGATGGGCAGTCGAGAGGAATTCACCTGTGCTAGGACAGAGGGTTACAAGGGCCGTAAATGCGATGGTATCCAGAATAAGCATAGCAGTGCCTTAAAACTCCAGGGCAGATGCCGTGTTCCGGATGAGCAGTTAAATGCTTGGATTCACATAAACGGGAAGAAATTGAGCTCAAAAGGAATTCCAAAATTTCCAGATTCAGATATTGAGCGTGATTCTCGGAAAACATGTGCTCAGTACAAACAAGTGAAGGGTCTTTTTGTATACAAATCTGGGATACATGGCCTCGGTCTTTATACTTCTCAAGTAATATCTCAGGGTAGAATGGTTGTAGAGTATGTCGGTGAAATTGTGAGACAAAGTGTGGCTGATAAAAGAGAAATTGAATACATATCTGGAAGGAAACTTCAGTACAAAAGTGCCTGCTACTTATTTAGGATAGACAATGAACATGTAATTGATGCCACAAGGAAGGGGGGGATTGCTCGATTTGTTAACCACTCATGTCTGCCAAATTGTGTGTCGAAAGTGATTACTGTAAGGCATCTGAAGAAGGTTGTCTTCTTTGCAAAGAGGGACATACTTCCTGGTGAAGAGATTACTTATGATTACAAATTTAACTATGAAGATGAAGGAAAGAAAATTCCATGTTCCTGCAACGCAAAAACTTGCAGGCGCTCTCTGAACTGA 5166 0.3966 MKTGKLINHNLQNLSDTFPDISSGAMVGTSSGSNIVFHDIQSNNTASWPTFPGGERARESYSYRGQSCVTIPASGLNFCTPNMQPTSRTAFEWFSANYATPSVSGGPRVFCMGKSGHLLISNTGLLGIVCSCHCCHMSILKFCEHSGLHSANPGDAVRMESGETIAQWQKLYFLKFGIRSSENESEWDWPEVFSTTGNLMKSNASDMSKSDLSHNLNSAAVTLRKQPMPNQDGCNIPLKGLNAFMQNNLYDRVKSQLMESNMAIFTPSPNFVGVQLNDGCQPIPPFLDSLKRDENLSITQSAQIPTSHKDHACIKKKNVETGILDKDATSSNIELRLGQPHQAGNPVASFVESPLFTFASSPKLHFLKQMTNNLSREEKMQNNFSHAAGSSKMLEEQPLLNPQYYMPGCSNISNAVTASSQTDNVATSSLFLPFPQFTSQHKGNTNASGNLVNDGSMPKNLHSEYGTAQFGSSNVLLNSNGQKGRQSNDSAPEFNKYLDNDNGARVGEDSCTKINSGFEVNQFMEFGSIRRTVGGSGSCTPIVNGKIYESSFASDTSVGANALQGSKNVFSFGRSNHLTLGTAVPFEGNLTSLPYLVSSSTSNQNSTLKQRGVNMDTYMLDENMRLLALTQMLELSKQQQALYFHDMNQKLGKSNISKPQNYIYKASVPEPGSSGASLKLAQNRGTCGNLEITDGLNSYCDVSALIPIPLQSKEKESQCKHSYDLQNDGPSLSLGMNNTRSSEKCSEQQSDLHFAGIYASAAWENCSRNNVCTGIEPSRDILKEKFADANGVTFLKIASECRRDQKASKNKNIYFELSGLDGRNTVKTGSHTPQWRDVPSRFRKPLCDATILDQMATVLDREGEDSVQVGNISTKRLKKIIDREDLLKERGNFNVSSGCSAPVVSQASGMEVNMVDSCNVDTTYAGCIENLVLDEGSGIDKGWSSDLVESERSAEYAGSTSGCDLKKGYMRVLNDQPCRSLLDDIKLLDSLIWKKGQDQNHIMLSVNCRASESQQGKKGFKGKERKRNKARVLGASLLPGISCSLDNQIGESPGAFDPPSSLSEEMRLYFSSTQQRSSTKVSIVQPITSHGPSSLSSKFCSCNNNNPNKHHRDEDSCESESNSHAEFHTLPGISRIKKSRKVFTSDCFGNFQTEVPYYDEPKNATQVLSSSRKGSAHRIKRPVVCGKYGEISSELSITEVPKPAKIVPLSKVLRNSKRCMIPTTETPGLTAKRKRRTLGLGTSWGHSCAKSGLKAKKDNESEYTIICDETNSDVSMEGFERAHKQTVVYKGKRDTKEGQGDILSRADSSLKVKSREIQKQRSINEIITEETQMQDMLKYAEDHQLSLCNKRSNISVQEHTNLSITNSDSFCGVCQRSSNDEANILLECSKCLIKVRHACYGISALPKRGQRCCRPCQINSKDIVCSICNQWGGSCIECRNVDCSVKFYPCAHQKSPLQIETDGINDEKVFFYRRSVLHGIGPECQSTYDSTDEMGSREEFTCARTEGYKGRKCDGIQNKHSSALKLQGRCRVPDEQLNAWIHINGKKLSSKGIPKFPDSDIERDSRKTCAQYKQVKGLFVYKSGIHGLGLYTSQVISQGRMVVEYVGEIVRQSVADKREIEYISGRKLQYKSACYLFRIDNEHVIDATRKGGIARFVNHSCLPNCVSKVITVRHLKKVVFFAKRDILPGEEITYDYKFNYEDEGKKIPCSCNAKTCRRSLN 1721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00680 1721 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 369 1426 - -
Trre2g00680 1721 ProSiteProfiles Post-SET domain profile. 1705 1721 IPR003616 -
Trre2g00680 1721 Pfam Tify domain binding domain 125 171 IPR032308 -
Trre2g00680 1721 Gene3D SET domain 1483 1721 IPR046341 -
Trre2g00680 1721 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1355 1422 IPR013083 -
Trre2g00680 1721 ProSiteProfiles SET domain profile. 1576 1697 IPR001214 GO:0005515
Trre2g00680 1721 SUPERFAMILY SET domain 1568 1717 IPR046341 -
Trre2g00680 1721 CDD SET_SETD1-like 1570 1717 - -
Trre2g00680 1721 Pfam SET domain 1587 1696 IPR001214 GO:0005515
Trre2g00680 1721 SMART set_7 1576 1703 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00680 Trre-Chr2 5395146 5407700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00680 1578 1717 C2H2 Transcription Factor Family AT2G23740 33.962 1.84e-16 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre2g00680 SET 1.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00680 - - tpra:123915468 3040.37