Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00656 ATGTCTAATGGTTTCATGAGTGTAAATACAACATTAGGAGTACAAAGAGTTTTCCTGAGATCCATTTGTGAGCAGGATGCTGCTTGGGGAATTGATCTTGAAGGTGTGCATGCTGGATTCAAGGGAGCAGGGATTGGATGTGTTGCCCGTACAATATCAATTAGATTCGGATTTTTCTTTTCTTTCATTGAGATTGATGTTCATGAATTTGGGGGAAAACATGACCGAGAAGAAAGCCTGGAACCATTAGGGGTGATCTGGCTGTTGTTGTTGGAAGGTGTGAACCGATACTACATCTCTTTGAGTGATTTACTTGGACTTGGTGGTAGATGGATATTTGTACTTGGAGGGAATGCTTGGTGGTTTGACTGGTTTCTGGCTCAACACATTGCAATATTTTCTTATTTCATGACAATTTTAATAAAACCAATGGAAAATCAGAAAAATGCTGTGACAGCACAAGGAAGAACTGATCCAAATCAAACCACTGGAATTTCAATCCAAAACTGTACTATTGATGCTGCACCTGATTTGGCTAATGACTTGAATTCGACATCGAGTTACTTAGGTAGACCATGGAAGATTTATTCAAGAACTGTTTATATGCAATCATATATTGGTGATTTTGTTGATCCTTCTGGTTGGTTAGAGTGGAATGGAACACTTGGATTAGACACTATTTTTTATGGTGAGTTTAATAACTATGGACCTGGTTCTATAACTGATAATAGGGTTCAATGGCCTGGTTATTTTCTTTTGAATGATACTCAATCTTGGAATTTCACTGTTCTTAAATTTACTTTGGGAAATACATGGCTTCCTGATACAGATATACCCTACACTGAAGGATTATTAAAGTAG 861 0.374 MSNGFMSVNTTLGVQRVFLRSICEQDAAWGIDLEGVHAGFKGAGIGCVARTISIRFGFFFSFIEIDVHEFGGKHDREESLEPLGVIWLLLLEGVNRYYISLSDLLGLGGRWIFVLGGNAWWFDWFLAQHIAIFSYFMTILIKPMENQKNAVTAQGRTDPNQTTGISIQNCTIDAAPDLANDLNSTSSYLGRPWKIYSRTVYMQSYIGDFVDPSGWLEWNGTLGLDTIFYGEFNNYGPGSITDNRVQWPGYFLLNDTQSWNFTVLKFTLGNTWLPDTDIPYTEGLLK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00656 286 SUPERFAMILY Pectin lyase-like 125 283 IPR011050 -
Trre2g00656 286 PANTHER PECTINESTERASE 139 276 - -
Trre2g00656 286 Gene3D - 107 286 IPR012334 -
Trre2g00656 286 Pfam Pectinesterase 123 269 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00656 Trre-Chr2 5187909 5191080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00656 123 285 Carbohydrate Esterase AT3G10720 62.577 9.39e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00656 K01051 - gmx:100816503 269.24