Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00654 ATGGAATTGATGGCTCCTGATATTTTTGGTCCAACATTCTTGCATTTAATTGACCGTACAATTTCAATTATATGGCTCCAAATAAGAAACCCTATTTCACCGCCAAATCCGATCCAAGTGAAACAAAAGGTTCTCTTCTCAATTGAATCTCTGGCCTATTTCCAGACCCATCCCAAAGCCCCAGCAGTGGAAGATGCTTCAAGGAAAAGATCAATGGATCTTAGATTACTTCATGGAGTTGCTTATGGTCACTCTTGGTTTGGTAGGTGGGGCTATAAGTTCTATCGCGGAAGCTTTGGTGTGACAGAAGAAAACTACTACTATGAAGCAATGGAAATTTCAAATCTAATATCAGTTATAGTGAGTTGCAAGAAAAGATTGATGAGAAAGTGGCAAGAGAGATTATAA 408 0.3873 MELMAPDIFGPTFLHLIDRTISIIWLQIRNPISPPNPIQVKQKVLFSIESLAYFQTHPKAPAVEDASRKRSMDLRLLHGVAYGHSWFGRWGYKFYRGSFGVTEENYYYEAMEISNLISVIVSCKKRLMRKWQERL 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00654 135 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 62 113 - -
Trre2g00654 135 Coils Coil 128 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00654 Trre-Chr2 5181481 5185730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00654 62 112 PHD Transcription Factor Family AT5G22260 56.863 2.84e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00654 K26271 - cit:102619384 90.1225