Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00635 ATGTCAAATTCTTGTTCTTCCTCAAACATCATTAATCCCTCCAAAAAAATCCTTGTTTTTCTTTCACTACTCATCACTCTTTCTTCCCTCCCAACAAAAACAAACTCACTTTTCTTCAACATAACAAATTTCGACGACCCAACCGTCGCTAAAAACATTTCATTCCAAGGTGACGGAAGAATCACCAACGGTTCCATTGATCTTAACAAAGTAAGTTACCTTTTCCGTGTTGGAAGAGCAATATATTCACAACCATTACACTTATGGGACAAAAACACAAAAACTCTCACTAGTTTCACCACACGTTTCACTTTCACAATCAATAGTTTAAACGACACTTCCTATGGTGACGGTTTTGTGTTTTTCTTAGCTCCTGTAGGATATCAAATTCCACCTAATTCAGCTGGTGGTGTTTTTGGTCTTTTTAATGCTACTACAAATAGTGATTTTGTTATGAACTATGTTGTTGCTGTTGAGTTTGATACTTTTGTTGGTTCTATTGACCCACCAATGAAACATGTTGGTATTGATGATAATGCTTTGACTTCTGTTGCTTTTGGGAAATTTGATATTGATAATAATCTTGGTAAAGTTTGTCATGTTTTGATTGATTATAGTTCTGATAAGAAGATGTTGGAAGTTTTTTGGTCTTTTAAAGGTGATGGAAATTTTGGGAATTCTTCAATTTCTTATCAGATTGATCTCATGAAGAAAATGCCTGAATATGTTAATATTGGTTTTTCGGCTTCAACGGGTCTTGTGGCCGAAAGTAATGTTATTCATTCGTGGGAGTTTAGTTCGAATTTGAATTCGGATTCTACCCCGGATGTGTTGTTGGAGGGAAATGGAAAAAAAGGGTCGTCAAAAACGGTTGTGGTTATTGTTGCGGTGATTGTTCCGGTTATTTTGATATTTTTGATAGCGAGTGTTGTTGGTTGGATGATAGTGAAGAGGAAAAGGAAGAATGTTGATGAAGGGTTGGATGAATATGGAATGCCTGTTTCGGCGAAATTTGATTTGGATAAAGCGACTATACCGAGAAGATTTGAATACAGCGAATTAGTTGCGGCTACTAATGGTTTTGCTGATGATAGAATGCTTGGAAGGGGAGGGTATGGACAAGTTTACAAAGGTGCTTTGAGTTATTTAGGTAGGGTTGTTGCTGTGAAGAGGATTTTCGCCGATTTCGAGAATTCAGAAAGAGTTTTCATCAATGAGGTTAGGATTATAAGCCGTTTAATACATCGAAACTTGGTTCAATTTATAGGTTGGTGTCATGAACAAGGTGTAGTCGGAACATACGGTTATCTAGCACCTGAATATATCAATGGAGGAAGGGCTAGTAAAGAATCTGATATGTATAGTTTTGGCATTGTTGCTTTGGAGATAGCAACTGGTAGAAGGATTTTTCAAGATGATGGTGATTTTCATGTGCCTTTGATGAATTGGGTTTGGGGACTTTATGTTGAAGGGAATCTTATGAGTGCTGCTGATGAAAGATTGAATTTGGAGTTTGATGTTAATGAAATGAAGAGTTTGCTTATTGTAGGGTTATGGTGTACTCATTCAAATGATAAAGAAAGACCTAAAGCTTATGAAGTGATTAAGGTTCTTAATCATGAAATGGCATTACCTGAACTTCCACTTGATATGCATGATCATGCTCCTCCAATTGTAAGTTTTAGGCCATCCAATTATGTATCTTTGCAACCACAAATGACTAATAGTCTTGTTTCTGATGGAAGATAG 1749 0.3642 MSNSCSSSNIINPSKKILVFLSLLITLSSLPTKTNSLFFNITNFDDPTVAKNISFQGDGRITNGSIDLNKVSYLFRVGRAIYSQPLHLWDKNTKTLTSFTTRFTFTINSLNDTSYGDGFVFFLAPVGYQIPPNSAGGVFGLFNATTNSDFVMNYVVAVEFDTFVGSIDPPMKHVGIDDNALTSVAFGKFDIDNNLGKVCHVLIDYSSDKKMLEVFWSFKGDGNFGNSSISYQIDLMKKMPEYVNIGFSASTGLVAESNVIHSWEFSSNLNSDSTPDVLLEGNGKKGSSKTVVVIVAVIVPVILIFLIASVVGWMIVKRKRKNVDEGLDEYGMPVSAKFDLDKATIPRRFEYSELVAATNGFADDRMLGRGGYGQVYKGALSYLGRVVAVKRIFADFENSERVFINEVRIISRLIHRNLVQFIGWCHEQGVVGTYGYLAPEYINGGRASKESDMYSFGIVALEIATGRRIFQDDGDFHVPLMNWVWGLYVEGNLMSAADERLNLEFDVNEMKSLLIVGLWCTHSNDKERPKAYEVIKVLNHEMALPELPLDMHDHAPPIVSFRPSNYVSLQPQMTNSLVSDGR 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00635 582 FunFam L-type lectin-domain containing receptor kinase IX.1 346 434 - -
Trre2g00635 582 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 274 IPR013320 -
Trre2g00635 582 Pfam Legume lectin domain 38 272 IPR001220 GO:0030246
Trre2g00635 582 CDD lectin_legume_LecRK_Arcelin_ConA 39 269 IPR001220 GO:0030246
Trre2g00635 582 PANTHER - 61 427 - -
Trre2g00635 582 Gene3D - 34 278 - -
Trre2g00635 582 ProSitePatterns Legume lectins beta-chain signature. 156 162 IPR019825 -
Trre2g00635 582 Gene3D Transferase(Phosphotransferase) domain 1 430 544 - -
Trre2g00635 582 ProSiteProfiles Protein kinase domain profile. 361 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00635 582 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Trre2g00635 582 Gene3D Phosphorylase Kinase; domain 1 346 429 - -
Trre2g00635 582 Pfam Protein kinase domain 362 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00635 582 Pfam Protein kinase domain 429 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00635 582 SUPERFAMILY Protein kinase-like (PK-like) 347 561 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00635 Trre-Chr2 5094595 5096616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00635 429 551 Receptor kinase-like Gene Family AT5G10530 48.031 9.65e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre2g00635 Lectin_legB 6.8e-62 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00635 - - vun:114193012 520.39