Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g00634 | ATGTCAAATTCTTGTTCTTCCTCAAACATCATTAATCCCTCCAAAAAAATCCTTGTTTTTCTTTCACTACTCATCACTCTTTCTTCCCTCCCAACAAAAACAAACTCACTTTTCTTCAACATAACAAATTTCGACGACCCAACCGTCGCTAAAAACATTTCATTCCAAGGTGACGGAAGAATCACCAACGGTTCCATTGATCTTAACAAAGTAAGTTACCTTTTCCGTGTTGGAAGAGCAATATATTCACAACCATTACACTTATGGGACAAAAACACAAAAACTCTCACTAGTTTCACCACACGTTTCACTTTCACAATCAATAGTTTAAACGACACTTCCTATGGTGACGGTTTTGTGTTTTTCTTAGCTCCTGTAGGATATCAAATTCCACCTAATTCAGCTGGTGGTGTTTTTGGTCTTTTTAATGCTACTACAAATAGTGATTTTGTTATGAACTATGTTGTTGCTGTTGAGTTTGATACTTTTGTTGGTTCTATTGACCCACCAATGAAACATGTTGGTATTGATGATAATGCTTTGACTTCTGTTGCTTTTGGGAAATTTGATATTGATAATAATCTTGGTAAAGTTTGTCATGTTTTGATTGATTATAGTTCTGATAAGAAGATGTTGGAAGTTTTTTGGTCTTTTAAAGGTGATGGAAATTTTGGGAATTCTTCAATTTCTTATCAGATTGATCTCATGAAGAAAATGCCTGAATATGTTAATATTGGTTTTTCGGCTTCAACGGGTCTTGTGGCCGAAAGTAATGTTATTCATTCGTGGGAGTTTAGTTCGAATTTGAATTCGGATTCTACCCCGGATGTGTTGTTGGAGGGAAATGGAAAAAAAGGGTCGTCAAAAACGGTTGTGGTTATTGTTGCGGTGATTGTTCCGGTTATTTTGATATTTTTGATAGCGAGTGTTGTTGGTTGGATGATAGTGAAGAGGAAAAGGAAGAATGTTGATGAAGGGTTGGATGAATATGGAATGCCTGTTTCGGCGAAATTTGATTTGGATAAAGCGACTATACCGAGAAGATTTGAATACAGCGAATTAGTTGCGGCTACTAATGGTTTTGCTGATGATAGAATGCTTGGAAGGGGAGGGTATGGACAAGTTTACAAAGGTGCTTTGAGTTATTTAGGTAGGGTTGTTGCTGTGAAGAGGATTTTCGCCGATTTCGAGAATTCAGAAAGAGTTTTCATCAATGAGGTTAGGATTATAAGCCGTTTAATACATCGAAACTTGGTTCAATTTATAGGTTGGTGTCATGAACAAGGTGAGTTTCTTTTAGTTTTTGAGTTCATGCCTAATGGAAGCCTTGACACACATTTATTTGGTGACAAGAAAAGTTTGGCTTGGGAAGTAAGATACAAAATTGCATTAGGTGTAGCGAATGCGCTTCGTTATCTTCACGATGACGCCGAGCAATGTGTTCTTCATAGGGATATTAAATCAGCTAATGTGTTGTTAGACACTGATTTCAGCACAAAACTCGGCGATTTCGGGATGGCAAAACTTGTTGATCCAATGTTGAGGACACAAAGAACAGGTGTAGTCGGAACATACGGTTATCTAGCACCTGAATATATCAATGGAGGAAGGGCTAGTAAAGAATCTGATATGTATAGTTTTGGCATTGTTGCTTTGGAGATAGCAACTGGTAGAAGGATTTTTCAAGATGATGGTGATTTTCATGTGCCTTTGATGAATTGGGTTTGGGGACTTTATGTTGAAGGGAATCTTATGAGTGCTGCTGATGAAAGATTGAATTTGGAGTTTGATGTTAATGAAATGAAGAGTTTGCTTATTGTAGGGTTATGGTGTACTCATTCAAATGATAAAGAAAGACCTAAAGCTTATGAAGTGATTAAGGTTCTTAATCATGAAATGGCATTACCTGAACTTCCACTTGATATGCATGATCATGCTCCTCCAATTGTAAGTTTTAGGCCATCCAATTATGTATCTTTGCAACCACAAATGACTAATAGTCTTGTTTCTGATGGAAGATAG | 2022 | 0.3689 | MSNSCSSSNIINPSKKILVFLSLLITLSSLPTKTNSLFFNITNFDDPTVAKNISFQGDGRITNGSIDLNKVSYLFRVGRAIYSQPLHLWDKNTKTLTSFTTRFTFTINSLNDTSYGDGFVFFLAPVGYQIPPNSAGGVFGLFNATTNSDFVMNYVVAVEFDTFVGSIDPPMKHVGIDDNALTSVAFGKFDIDNNLGKVCHVLIDYSSDKKMLEVFWSFKGDGNFGNSSISYQIDLMKKMPEYVNIGFSASTGLVAESNVIHSWEFSSNLNSDSTPDVLLEGNGKKGSSKTVVVIVAVIVPVILIFLIASVVGWMIVKRKRKNVDEGLDEYGMPVSAKFDLDKATIPRRFEYSELVAATNGFADDRMLGRGGYGQVYKGALSYLGRVVAVKRIFADFENSERVFINEVRIISRLIHRNLVQFIGWCHEQGEFLLVFEFMPNGSLDTHLFGDKKSLAWEVRYKIALGVANALRYLHDDAEQCVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPMLRTQRTGVVGTYGYLAPEYINGGRASKESDMYSFGIVALEIATGRRIFQDDGDFHVPLMNWVWGLYVEGNLMSAADERLNLEFDVNEMKSLLIVGLWCTHSNDKERPKAYEVIKVLNHEMALPELPLDMHDHAPPIVSFRPSNYVSLQPQMTNSLVSDGR | 673 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g00634 | 673 | CDD | lectin_legume_LecRK_Arcelin_ConA | 39 | 269 | IPR001220 | GO:0030246 | |
Trre2g00634 | 673 | ProSitePatterns | Legume lectins beta-chain signature. | 156 | 162 | IPR019825 | - | |
Trre2g00634 | 673 | CDD | STKc_IRAK | 367 | 630 | - | - | |
Trre2g00634 | 673 | Pfam | Protein kinase domain | 362 | 626 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00634 | 673 | SMART | serkin_6 | 361 | 634 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00634 | 673 | FunFam | L-type lectin-domain containing receptor kinase IX.1 | 438 | 639 | - | - | |
Trre2g00634 | 673 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 36 | 274 | IPR013320 | - | |
Trre2g00634 | 673 | FunFam | L-type lectin-domain containing receptor kinase IX.1 | 346 | 437 | - | - | |
Trre2g00634 | 673 | Gene3D | - | 34 | 278 | - | - | |
Trre2g00634 | 673 | Gene3D | Phosphorylase Kinase; domain 1 | 346 | 437 | - | - | |
Trre2g00634 | 673 | Gene3D | Transferase(Phosphotransferase) domain 1 | 438 | 646 | - | - | |
Trre2g00634 | 673 | ProSitePatterns | Protein kinases ATP-binding region signature. | 367 | 390 | IPR017441 | GO:0005524 | |
Trre2g00634 | 673 | ProSiteProfiles | Protein kinase domain profile. | 361 | 634 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00634 | 673 | Pfam | Legume lectin domain | 38 | 272 | IPR001220 | GO:0030246 | |
Trre2g00634 | 673 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 481 | 493 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g00634 | 673 | PANTHER | - | 61 | 633 | - | - | |
Trre2g00634 | 673 | SUPERFAMILY | Protein kinase-like (PK-like) | 345 | 656 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g00634 | Trre-Chr2 | 5094595 | 5096616 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g00634 | 36 | 642 | Receptor kinase-like Gene Family | AT5G10530 | 46.191 | 3.35e-178 | 520 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Trre2g00634 | Pkinase | 2.7e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g00634 | - | - | gmx:100791220 | 875.544 |