Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00634 ATGTCAAATTCTTGTTCTTCCTCAAACATCATTAATCCCTCCAAAAAAATCCTTGTTTTTCTTTCACTACTCATCACTCTTTCTTCCCTCCCAACAAAAACAAACTCACTTTTCTTCAACATAACAAATTTCGACGACCCAACCGTCGCTAAAAACATTTCATTCCAAGGTGACGGAAGAATCACCAACGGTTCCATTGATCTTAACAAAGTAAGTTACCTTTTCCGTGTTGGAAGAGCAATATATTCACAACCATTACACTTATGGGACAAAAACACAAAAACTCTCACTAGTTTCACCACACGTTTCACTTTCACAATCAATAGTTTAAACGACACTTCCTATGGTGACGGTTTTGTGTTTTTCTTAGCTCCTGTAGGATATCAAATTCCACCTAATTCAGCTGGTGGTGTTTTTGGTCTTTTTAATGCTACTACAAATAGTGATTTTGTTATGAACTATGTTGTTGCTGTTGAGTTTGATACTTTTGTTGGTTCTATTGACCCACCAATGAAACATGTTGGTATTGATGATAATGCTTTGACTTCTGTTGCTTTTGGGAAATTTGATATTGATAATAATCTTGGTAAAGTTTGTCATGTTTTGATTGATTATAGTTCTGATAAGAAGATGTTGGAAGTTTTTTGGTCTTTTAAAGGTGATGGAAATTTTGGGAATTCTTCAATTTCTTATCAGATTGATCTCATGAAGAAAATGCCTGAATATGTTAATATTGGTTTTTCGGCTTCAACGGGTCTTGTGGCCGAAAGTAATGTTATTCATTCGTGGGAGTTTAGTTCGAATTTGAATTCGGATTCTACCCCGGATGTGTTGTTGGAGGGAAATGGAAAAAAAGGGTCGTCAAAAACGGTTGTGGTTATTGTTGCGGTGATTGTTCCGGTTATTTTGATATTTTTGATAGCGAGTGTTGTTGGTTGGATGATAGTGAAGAGGAAAAGGAAGAATGTTGATGAAGGGTTGGATGAATATGGAATGCCTGTTTCGGCGAAATTTGATTTGGATAAAGCGACTATACCGAGAAGATTTGAATACAGCGAATTAGTTGCGGCTACTAATGGTTTTGCTGATGATAGAATGCTTGGAAGGGGAGGGTATGGACAAGTTTACAAAGGTGCTTTGAGTTATTTAGGTAGGGTTGTTGCTGTGAAGAGGATTTTCGCCGATTTCGAGAATTCAGAAAGAGTTTTCATCAATGAGGTTAGGATTATAAGCCGTTTAATACATCGAAACTTGGTTCAATTTATAGGTTGGTGTCATGAACAAGGTGAGTTTCTTTTAGTTTTTGAGTTCATGCCTAATGGAAGCCTTGACACACATTTATTTGGTGACAAGAAAAGTTTGGCTTGGGAAGTAAGATACAAAATTGCATTAGGTGTAGCGAATGCGCTTCGTTATCTTCACGATGACGCCGAGCAATGTGTTCTTCATAGGGATATTAAATCAGCTAATGTGTTGTTAGACACTGATTTCAGCACAAAACTCGGCGATTTCGGGATGGCAAAACTTGTTGATCCAATGTTGAGGACACAAAGAACAGGTGTAGTCGGAACATACGGTTATCTAGCACCTGAATATATCAATGGAGGAAGGGCTAGTAAAGAATCTGATATGTATAGTTTTGGCATTGTTGCTTTGGAGATAGCAACTGGTAGAAGGATTTTTCAAGATGATGGTGATTTTCATGTGCCTTTGATGAATTGGGTTTGGGGACTTTATGTTGAAGGGAATCTTATGAGTGCTGCTGATGAAAGATTGAATTTGGAGTTTGATGTTAATGAAATGAAGAGTTTGCTTATTGTAGGGTTATGGTGTACTCATTCAAATGATAAAGAAAGACCTAAAGCTTATGAAGTGATTAAGGTTCTTAATCATGAAATGGCATTACCTGAACTTCCACTTGATATGCATGATCATGCTCCTCCAATTGTAAGTTTTAGGCCATCCAATTATGTATCTTTGCAACCACAAATGACTAATAGTCTTGTTTCTGATGGAAGATAG 2022 0.3689 MSNSCSSSNIINPSKKILVFLSLLITLSSLPTKTNSLFFNITNFDDPTVAKNISFQGDGRITNGSIDLNKVSYLFRVGRAIYSQPLHLWDKNTKTLTSFTTRFTFTINSLNDTSYGDGFVFFLAPVGYQIPPNSAGGVFGLFNATTNSDFVMNYVVAVEFDTFVGSIDPPMKHVGIDDNALTSVAFGKFDIDNNLGKVCHVLIDYSSDKKMLEVFWSFKGDGNFGNSSISYQIDLMKKMPEYVNIGFSASTGLVAESNVIHSWEFSSNLNSDSTPDVLLEGNGKKGSSKTVVVIVAVIVPVILIFLIASVVGWMIVKRKRKNVDEGLDEYGMPVSAKFDLDKATIPRRFEYSELVAATNGFADDRMLGRGGYGQVYKGALSYLGRVVAVKRIFADFENSERVFINEVRIISRLIHRNLVQFIGWCHEQGEFLLVFEFMPNGSLDTHLFGDKKSLAWEVRYKIALGVANALRYLHDDAEQCVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPMLRTQRTGVVGTYGYLAPEYINGGRASKESDMYSFGIVALEIATGRRIFQDDGDFHVPLMNWVWGLYVEGNLMSAADERLNLEFDVNEMKSLLIVGLWCTHSNDKERPKAYEVIKVLNHEMALPELPLDMHDHAPPIVSFRPSNYVSLQPQMTNSLVSDGR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00634 673 CDD lectin_legume_LecRK_Arcelin_ConA 39 269 IPR001220 GO:0030246
Trre2g00634 673 ProSitePatterns Legume lectins beta-chain signature. 156 162 IPR019825 -
Trre2g00634 673 CDD STKc_IRAK 367 630 - -
Trre2g00634 673 Pfam Protein kinase domain 362 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00634 673 SMART serkin_6 361 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00634 673 FunFam L-type lectin-domain containing receptor kinase IX.1 438 639 - -
Trre2g00634 673 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 274 IPR013320 -
Trre2g00634 673 FunFam L-type lectin-domain containing receptor kinase IX.1 346 437 - -
Trre2g00634 673 Gene3D - 34 278 - -
Trre2g00634 673 Gene3D Phosphorylase Kinase; domain 1 346 437 - -
Trre2g00634 673 Gene3D Transferase(Phosphotransferase) domain 1 438 646 - -
Trre2g00634 673 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Trre2g00634 673 ProSiteProfiles Protein kinase domain profile. 361 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00634 673 Pfam Legume lectin domain 38 272 IPR001220 GO:0030246
Trre2g00634 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Trre2g00634 673 PANTHER - 61 633 - -
Trre2g00634 673 SUPERFAMILY Protein kinase-like (PK-like) 345 656 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00634 Trre-Chr2 5094595 5096616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00634 36 642 Receptor kinase-like Gene Family AT5G10530 46.191 3.35e-178 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre2g00634 Pkinase 2.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00634 - - gmx:100791220 875.544