Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00619 ATGGCTGTTTCATCTTCATCATCTCTTTTGCTCCTTTTTCTTGTGTTTGGTTTTGCTGCTGCTGCAGCTAGGGATGTCTATCTTGATGGCGGAAAGCCAGATTCTTGGAAAATTCCATCTGAATCTGATTCACTCAACAAATGGGCTCAAACTGTTCGCTTCCGAATTGGAGACCATCTAATTTTGAAATATGAAGCTGGAGAAGACTCAGTTTTGCAAGTTACCAAAGAGGATTATGTGAGTTGCAACATCTCAAACCCAATCAAACACTACAATGATGGTTACACTAAAGTGAGATTTGATCATTCTGGTCCATACTACTACATCAGTGGAGAAAAGGGTCACTGTGAAAAGGGTCAGAAGCTTACAATAGTGGTTTTGAGTCCAAGGGGAAAGAGTCCTACTACTCCTGCTGCTGCTACTTCACCTGCACCTTCACCAGCTGAGGTTGAAGGTCCCGGTCCTGCTGTTGCTCCAGCTCCAACTAGTACTGCAACTGTTTTGCAAGGTGGTGGTGTTTTTGTGGCTATTGGAGTGATTGTTGCTATGTGGCTTTTCTGA 561 0.4349 MAVSSSSSLLLLFLVFGFAAAAARDVYLDGGKPDSWKIPSESDSLNKWAQTVRFRIGDHLILKYEAGEDSVLQVTKEDYVSCNISNPIKHYNDGYTKVRFDHSGPYYYISGEKGHCEKGQKLTIVVLSPRGKSPTTPAAATSPAPSPAEVEGPGPAVAPAPTSTATVLQGGGVFVAIGVIVAMWLF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00619 186 CDD OsENODL1_like 30 127 IPR041846 -
Trre2g00619 186 SUPERFAMILY Cupredoxins 31 127 IPR008972 -
Trre2g00619 186 MobiDBLite consensus disorder prediction 130 157 - -
Trre2g00619 186 ProSiteProfiles Phytocyanin domain profile. 25 128 IPR003245 GO:0009055
Trre2g00619 186 Pfam Plastocyanin-like domain 36 120 IPR003245 GO:0009055
Trre2g00619 186 PANTHER BLUE COPPER PROTEIN 31 141 IPR039391 GO:0009055
Trre2g00619 186 FunFam Early nodulin-like protein 1 25 131 - -
Trre2g00619 186 Gene3D - 27 139 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00619 Trre-Chr2 5020827 5022023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00619 14 183 Phytocyanin Superfamily AT2G25060 52.632 1.30e-57 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00619 - - gmx:100527857 187.963