Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00617 ATGGCGGGGAGGCACTGTTACAAGGATGTGATTCCATTCACAGTAATGGTTGCAATGGAGTGCTCTAACGTTGGTGTCAGTGTTCTATTCAAAGCAGCTACTGAAAAGGGATTGAGTTACTATGTCTTCATCGCTTATTCATATGTTGTCTCCGCTCTTGTTCTTCTTTTGCCTCTCCCCTTCTTCGTCTTCAAATGGTCAAGAGGGCTTCCTCCTTTGAATGTGTCTCTAATCTTCAGAATTTTTCTCCTTGGAGTTTTGGGAGTTATAGCTCAGCTTTTTGGATATAAAGGACTTCAATACACTACGCCTACTCTTTATTCTGCTCTTTCAAACCTTATACCTGCTTTTACATTCATCCTTGCTATCTTTTTCAGGATGGAGAAGGTAAATATAAGATCCAAAAGCACTCAAGCAAAAATATTGGGTTCTACAATATCAATATTAGGTGCACTCATAGTTGTTCTTTATAAGGGTCCAATAATCACACCCTCATCAATACAACCATCACCACCACCTATTATTAATTCTCCAATAAGCTCAACATCAGAATCAAATTGGGTTCTTGGTGGATCTCTACTAGTTATTGAGGCTCTTATTATTCCAATTTGGTACATTATTCAGACTAATGTTATAAAACAATATCCATCAGAGATTATTGTGGTCTTTTTATACAACCTATGTGGAACACTAGTGTCTTTACCACTATGCCTACTACTTGAATCAAATTTGAGTGCTTGGAAGATAAATCATGATATAACATTGATCTCCATTTTATACTCGGGAATATTTTGCACAGGACTAAGTTCACTTGTTCACACTTGGGGACTCCATGTTAAAGGACCTGTATATATATCACTCTTTAAGCCATTGTCAATTGCTATTGCGGCATCTTTTAGCGCTATATTCCTCGGCGATCCCCTGTATTTTGGAACTGTAGTTGGAGCAGTAATAATATCAATTGGATTTTATGCTGTTTTATGGGGGAAATCCAAAGAAGAATCAAATGAAGATTTTGACATAGGTAGAGTTTCACTTCCATCCAATACTAAAACTCCTTTGTTGAAAGGGCCAAATGTGATAGATATGTAA 1092 0.3709 MAGRHCYKDVIPFTVMVAMECSNVGVSVLFKAATEKGLSYYVFIAYSYVVSALVLLLPLPFFVFKWSRGLPPLNVSLIFRIFLLGVLGVIAQLFGYKGLQYTTPTLYSALSNLIPAFTFILAIFFRMEKVNIRSKSTQAKILGSTISILGALIVVLYKGPIITPSSIQPSPPPIINSPISSTSESNWVLGGSLLVIEALIIPIWYIIQTNVIKQYPSEIIVVFLYNLCGTLVSLPLCLLLESNLSAWKINHDITLISILYSGIFCTGLSSLVHTWGLHVKGPVYISLFKPLSIAIAASFSAIFLGDPLYFGTVVGAVIISIGFYAVLWGKSKEESNEDFDIGRVSLPSNTKTPLLKGPNVIDM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00617 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 158 - -
Trre2g00617 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 332 - -
Trre2g00617 363 PANTHER WAT1-RELATED PROTEIN 12 335 IPR030184 GO:0016020|GO:0022857
Trre2g00617 363 Pfam EamA-like transporter family 192 327 IPR000620 GO:0016020
Trre2g00617 363 Pfam EamA-like transporter family 27 155 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00617 Trre-Chr2 5009629 5013446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00617 1 335 Nodulin-like Gene Family AT5G40240 54.464 7.83e-127 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00617 - - gmx:100805667 476.092