Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00609 ATGGCATTGTTCCGTAAGTTCTTCTATAAGAAACCCCCTGATGGCCTTCTTGAAATCACTGAAAGGGTTTATGTCTTTGATTACTGCTTTACCACGGATGTTATGGACGAAGATGAATATAAAGTGTATATAGGAGGAATAATTAGGCAAATAGGCGAGCACTTCCCCGACGCTTCATTTATGGTGTTCAACATGAGGGAAGGAGAAAACCAAAGCCATATATCAAGCATTTTGTGTGACTATGACATGACTGTGATGGACTATCCAAGACAATATGAAGGCTGTCCTTTACTTACCATGGAGATGATCCATCATTTCTTGAGATCAGGTGAAAATTGGCTTCAACTAGGGCAACAAAATGTTGTCTTGATGCACTGCGAACGAGGTGGATGGCCAGTTTTAGCATTTATGCTGGCTGCACTCTTGATTTATAGAAAAATGTATACAGGGGAACAAAAAACACTGGATATGATATATAAGCAAGCGCCTCGGGAACTTTTGCAATTGATGTCACCATTGAATCCGTTACCTTCACAATTAAGGTATCTTCAGTACATATCAAGAAGAAATGTTGGTTCAGAATGGCCTCCTTTGGATAGGGCACTTACGTTGGACTGCGTAATTATACGACATATTCCTAATATGGATGGAGAGGGTGGTTGCCGTCCTATCTTTAGGATATATGGACAAGATCCTTTTATTCCTGCGAATCGGACTCCCAAAGTTCTCTTTTCTACTCCGAAAAAGAGCAAACTTGTTCGGCACTACAAGCAGGCTGATTGCGAACTAGTCAAGATCGACATCCATTGTCATGTTCAAGGCGATGTTGTACTTGAGTGTATTAGTTTGGAAGGTGATTTGGAACGTGAACAAATGATGTTCCGGGTGATGTTTAATACGGCATTCATAAGATCAAACATTTTGATGCTTAACCGCGATGAAATCGACATGTTATGGAATGCTAAAGATCATTTCCCTAAAGATTTTAGAGTAGAGGTTCTTTTCTCAGATATGGAGGCTTCTTCGTCTTCTGTTATTTCAATCGATCTTCCTCGTATTGAGGAGAAAGAAGGTCTACCTGTTGAAGCATTTGCTAAAGTTAAGGAAATTTTCAGTCAGGTTGAATGGCTCGATTCAAAGTCCGATGTAGCAAATATGCTACAACAGATCACAGCATCAAATATCATTCTAGAAAGATTGGACAGTGGAGGTTTAGCTTCACCAACCGCCTTGCTAAACGAGTCATTGTCTGGAAGATTTAAATTTGATTCAAAGACACCAAACGAAACAGACAATCTCAAATCTTCTTTTCATGAGGAACTTCCCTTGTCTCCATTGCGATCGTCTGAGGATGTTCCTATGAAAAAAATGATTGAACCATTAAAAATAGAGGAATTGTCAGAAGAGAAAATCGAGACTCTTGCAAGTTTAGGTCAAGCGAGCAAACCTATTCCTTCATTTGATCTGTCAAAAGATTCAGATTCGACTAAAGTTGAGACTGAATCATCAGAATCAAAACAATCATTGGAAAATTATCCTAAATTTCCTGCTTCTACAGCTCAGTTGGAACAATCTGTCCCCTTAATTGAACCATCAATAGATGCAGATTCTATGAAAAAGAAGACTGGATCATTGGAATCTGAGGAAAAGAAGATTGAATCATTAGCATCAAAGGCGGTATTGGAAAACGACACCATGTTTCCTGCATCTGATTCTTCTACTAAAGCAAATTCTGTGAAAAGTATTGGACTGTTGGGATCAAAAGAAAAGGAGATTGAATCATTAGACTCAAAGGCACTGTTGGAGAATGATAGCGGAGTTAAATCCAAACCAAAGATGCGTCCAGAAGCTGAGATAAGAAGTCCGAGTTCTGCAGGTCAAGAGAAATTTTCAGCGTCCTCATTTGAATCAATTGGGGATGCTACAATGGAAAAGAAGAAAAAACCTTCAGATTTAACGGCATCACCAGAAAATAACATCAAGATTCCTGCACCGGCAGATTCAAATTCTACTGCGATGAAGATTGAATCATTAGAATCAAAGGCACCAGTGGAAAATGATACCAAGTTTCCTACGTCTACGGCTCAAGCAAAACAATCTACTCCCTCAATCAAGCCATCCACAGAAGCAAATTCAGTGAAACAGTCGATGGAGCAATTAGAGTCAAAGAAAAAGGATATTGAATCAATAGAATCAAAGTCATTGGAAAATGATACCAAGGGGAAACAATCAGTTCCCTTAATTCAAACATCAGTGGATGCAAGTTCAATGAAAACAATGAATGAGAAATCAGAATCAACGGCGTTGTCAGAAAATGATACCAAGAGTCCCACATCCGAGGTTGATAAGAAACAAATTAGTCCTTCACTTGAACCCACCGTTGATGAAAAATCAATTAAAAAGAAGATTGATTCTCAAGAGTTGCAGGTTTCTCTTCAGCTACCAACCCAATCGAAAATAATTTCTCCACGGATACATCAAGCTAATCGATCAGCTACAGCTTCTTATTCTTCTAATTCCTCGCTAGGTTCACCTGTAGGATCGGCTCTCGGAATAACATCTGTGTTGCAAGATCATGCACCAAAGGATATCAAAGAAGACGTCACTCATGCAGTGTCGATATCTCCTCCTTCAGACTCAAAGGTGCCAAAGTCTGTAGAGACTTGTTCTACAAGTATTCCTACAACATCATCAACACCGGCATTGCTTCCATCTTCGCCGTTAAAGTCTTCAGCGGATCCTCCTGATGCTGTCGAAAAGACTTCTAAACCTCTTGCTCCTATTCCTCCTCCACCTCCACCTCCACAACAAGAGCCTACTTCAAAATTGATGCAATCTACTATCACACAACATGGTGAAAATTCAATGCATGATAAAAAACAGATATCATCTGCTATTCCTCCTCCTCCCCCTCCTCCGTCCCTTCCTGAAACATCTCTTTCCACCATCAAAGATTCATCAAAAAGTCCTTCTTGTCTGCCACCTCCACCACCACCACCACCACCTCCATCTTCAACCGGACAAACTTCATCATCTTCAATACCTCCTCCTCCACTTCCTCCTCCACAGAGTATGAACAACTCTGTTGCTATGCCTGGTCCTCCCCCTCCACCTCCACCACCAAGCCAACCCGGAACCACTCCTGGTTCCACTTCTACACAGTCTGTGCCACCACCACCCCCTCCTCCAGCTTCTGCAACCCAAAATTCTCTGTCTAAAAGCTCTCCAAATGTTCCACCTGTACCTCCACCTCCTTCTGCCAATGGATTAGCAAAACCCGGCACTGCAACACCTCAGCCTCCTGGAATTCCTGGACCACCTCAGCCTCCTGCAATTCCTGGACCGCCAGGAAATGCACCTCCAGTTCCTGGACCACCTGGAAATGTGCCTCCAATTCCTGGACCACCTTCCGGTGCATTTGGTGCAAAGGGACGTGGATTGCTACGAACTACTGCAAAAACTCAGACTAAAAGGAGCAATCTAAAACCTTACCATTGGTTAAAGTTAACAAGGGCCATGCAAGGTAGCTTGTGGGCTGAGACACAGAAACTTGATGAAGCTAGTAGGGCTCCTGAGTTTGACATGTCTGAACTTGAGACTCTTTTCTCTGCAGCTACTCCAAGTAATAATAGTGAAAAAGGAGGAAATTCAAATCGCCGTGGCTCAGCGCAAAAACCTGACAAAGTTCAATTAATTGAACTCAGACGAGCGTATAACTGCGAGATTATGCTTACAAAAGTCAAAATACCATTGCCTGATTTAATGGGTCATGTTCTCGCATTGGACGATTCTGTATTATATGTTGATCAGGTTGAGAACCTCATTAAGTTCTGTCCGACTAAAGAAGAGATGGACCAGCTCAAGGCATACACAGGAGATAAGGACAATTTGGGGAAGTGTGAACAGTTCTTCTTAGAATTAATGAAAGTTCCAAGAGTGGAAAGCAAGCTAAGAGTTTTCTGTTTTAAGATGCAATTCTGCTCCCAGGTTCTAGAACTCAAAAGAGACTTGAATATCGTAAATTCTGCATCTGAAGAGATAAGGAATTCAGTCAAATTGAAAAGAATCATGCAGACCATTCTTTCGCTCGGAAATGCTTTGAACCATGGAACTGCAAGAGGTGCTGCTGTTGGGTTCCGATTGGATAGTCTTCTTAAACTCACTGATACACGAGCCAGAAACAACAAAATGACCCTCATGCATTATCTTTGTAAGGTGCTTTCTGAAAAGCTTCCAGAACTTTTAGATTTCCACAAAGACCTAGTTAATTTGGAGGCTTCAACAAAGATACAATTGAAATTTTTGGCGGAAGAAATGCAAGCTATTAGCAAAGGACTAGAGAAAGTAATTCAAGAACTGACTGCATCAGAGAATGATGGACCTGTGTCAGAAACCTTCTGCCAGATTCTGAAAGAATTTCTTAGTGACGCTGAAGCTGAAGTGAGGTCTTTGGCTCAGCTTTATGCCAATGTGGGTAGAAATGCAGATGCATTAGCGTCATACTTCGGAGAAGACCCAGCACGTTGCCCATTTGAACAAGTTGTAACTACTCTGCTGAACTTTGTGAGGATGTTCATCCGAGCACACGACGAAAATTGCAAGCAGATTGAATATGATAAAAAGAAAGCCGAGAAGGAAGCAGCAGCAGAAAATGAAAAGTTGAAGCTAGCTGCTAAAAATGACTCTCCGCGTATGATGAGAACCACCATCAAGAGTGGTGATATCAAATAA 4731 0.4141 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVMDEDEYKVYIGGIIRQIGEHFPDASFMVFNMREGENQSHISSILCDYDMTVMDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGQQNVVLMHCERGGWPVLAFMLAALLIYRKMYTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRHIPNMDGEGGCRPIFRIYGQDPFIPANRTPKVLFSTPKKSKLVRHYKQADCELVKIDIHCHVQGDVVLECISLEGDLEREQMMFRVMFNTAFIRSNILMLNRDEIDMLWNAKDHFPKDFRVEVLFSDMEASSSSVISIDLPRIEEKEGLPVEAFAKVKEIFSQVEWLDSKSDVANMLQQITASNIILERLDSGGLASPTALLNESLSGRFKFDSKTPNETDNLKSSFHEELPLSPLRSSEDVPMKKMIEPLKIEELSEEKIETLASLGQASKPIPSFDLSKDSDSTKVETESSESKQSLENYPKFPASTAQLEQSVPLIEPSIDADSMKKKTGSLESEEKKIESLASKAVLENDTMFPASDSSTKANSVKSIGLLGSKEKEIESLDSKALLENDSGVKSKPKMRPEAEIRSPSSAGQEKFSASSFESIGDATMEKKKKPSDLTASPENNIKIPAPADSNSTAMKIESLESKAPVENDTKFPTSTAQAKQSTPSIKPSTEANSVKQSMEQLESKKKDIESIESKSLENDTKGKQSVPLIQTSVDASSMKTMNEKSESTALSENDTKSPTSEVDKKQISPSLEPTVDEKSIKKKIDSQELQVSLQLPTQSKIISPRIHQANRSATASYSSNSSLGSPVGSALGITSVLQDHAPKDIKEDVTHAVSISPPSDSKVPKSVETCSTSIPTTSSTPALLPSSPLKSSADPPDAVEKTSKPLAPIPPPPPPPQQEPTSKLMQSTITQHGENSMHDKKQISSAIPPPPPPPSLPETSLSTIKDSSKSPSCLPPPPPPPPPPSSTGQTSSSSIPPPPLPPPQSMNNSVAMPGPPPPPPPPSQPGTTPGSTSTQSVPPPPPPPASATQNSLSKSSPNVPPVPPPPSANGLAKPGTATPQPPGIPGPPQPPAIPGPPGNAPPVPGPPGNVPPIPGPPSGAFGAKGRGLLRTTAKTQTKRSNLKPYHWLKLTRAMQGSLWAETQKLDEASRAPEFDMSELETLFSAATPSNNSEKGGNSNRRGSAQKPDKVQLIELRRAYNCEIMLTKVKIPLPDLMGHVLALDDSVLYVDQVENLIKFCPTKEEMDQLKAYTGDKDNLGKCEQFFLELMKVPRVESKLRVFCFKMQFCSQVLELKRDLNIVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGAAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLSEKLPELLDFHKDLVNLEASTKIQLKFLAEEMQAISKGLEKVIQELTASENDGPVSETFCQILKEFLSDAEAEVRSLAQLYANVGRNADALASYFGEDPARCPFEQVVTTLLNFVRMFIRAHDENCKQIEYDKKKAEKEAAAENEKLKLAAKNDSPRMMRTTIKSGDIK 1576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00609 1576 PANTHER FORMIN-J 1 640 - -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 990 1006 - -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 1013 1046 - -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 624 638 - -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 739 786 - -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 924 939 - -
Trre2g00609 1576 SMART it6_source 663 1574 IPR015425 -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 686 717 - -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 534 557 - -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 1202 1226 - -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 861 1144 - -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 421 452 - -
Trre2g00609 1576 Pfam Formin Homology 2 Domain 1153 1525 IPR015425 -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 593 798 - -
Trre2g00609 1576 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1226 1552 - -
Trre2g00609 1576 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 718 738 - -
Trre2g00609 1576 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 1097 1137 - -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 821 848 - -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 873 906 - -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 593 617 - -
Trre2g00609 1576 Coils Coil 710 733 - -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 482 579 - -
Trre2g00609 1576 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Trre2g00609 1576 Gene3D Formin, FH2 domain 1170 1565 IPR042201 -
Trre2g00609 1576 SMART PTEN_C2_2 197 337 IPR014020 -
Trre2g00609 1576 Gene3D - 196 341 - -
Trre2g00609 1576 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1151 1551 IPR015425 -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 653 676 - -
Trre2g00609 1576 Coils Coil 1526 1560 - -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 1202 1224 - -
Trre2g00609 1576 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Trre2g00609 1576 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Trre2g00609 1576 MobiDBLite consensus disorder prediction 505 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00609 Trre-Chr2 4942031 4950628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00609 751 930 FH2 protein (formin) Gene Family AT2G25050 33.161 5.10e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00609 - - tpra:123915978 2415.96