Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00585 ATGTTAACTTGGAACCTTTTTCACGCAAGAATAACCTCTACACACGCAATATTGTTATTGTTTCTTCTTCATTTTTTCGTTTTTTTGGTTACACAAGTTGTTTCTGAGAACCTTGTTGAATATTCAACCTGTGATATGGGTTATCTCAATTCTGTTTTGTCATCTTCAAGTCAGGTTAATTCTGCTGATGATTCACCTGTTAGTGGTGGGGGACTCAGTCAGAATGGAAAATTCAGCTATGGATATGCCAGCTCCCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGACGGCGTTGATGGTGAAGTTGTTGGCCTTTTTGGAGTTTTTGACGGTCACGGCGGTGCTCGTGCTGCTGAGTATGTCAAGCAAAACCTGTTTAGTAATTTGATCAGCCATCCAAAATTCATTTCTGACACTAAATCTGCAATAGCTGATGCGTATACGCACACCGACTCTGAATTTCTGAAATCAGAAAATAATCAAAACAGAGATGCTGGATCTACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGAGGCGGAAACGCAATTGCTGTGTCCCGAGATCATAAACCAGATCAAACCGATGAGAGGCAAAGGATAGAGGATGCAGGAGGGTTTGTTATGTGGGCCGGAACTTGGAGAGTTGGTGGTGTTCTTGCCGTTTCTCGTGCATTTGGCGATAGACTTCTTAAGCAATACGTTGTTGCTGATCCGGAAATCCAGGAAGAAAAGGTGGATGGCTCTCTCGAGTTTCTTATATTAGCCAGTGACGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTTGCTATGATTAAACCAATTGAGGACGCAGAGGAAGCGGCTAAGAGACTGATGAAAGAAGCATATCAGAGAGGTAGTTCTGACAACATTACTTGTGTCGTCGTTCGTTTCATATTGAACAACCAAGGTTCTTCTTCTCGTAATAGCTCTGGCTAA 1020 0.4265 MLTWNLFHARITSTHAILLLFLLHFFVFLVTQVVSENLVEYSTCDMGYLNSVLSSSSQVNSADDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEVVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYTHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDGSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMKEAYQRGSSDNITCVVVRFILNNQGSSSRNSSG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00585 339 Pfam Protein phosphatase 2C 107 318 IPR001932 -
Trre2g00585 339 SMART PP2C_SIG_2 74 325 IPR001932 -
Trre2g00585 339 Gene3D - 71 329 IPR036457 -
Trre2g00585 339 PANTHER PROTEIN PHOSPHATASE 65 324 IPR015655 GO:0004722|GO:0006470
Trre2g00585 339 FunFam probable protein phosphatase 2C 59 71 329 - -
Trre2g00585 339 SMART PP2C_4 69 323 IPR001932 -
Trre2g00585 339 ProSiteProfiles PPM-type phosphatase domain profile. 79 325 IPR001932 -
Trre2g00585 339 SUPERFAMILY PP2C-like 73 325 IPR036457 -
Trre2g00585 339 CDD PP2Cc 78 325 IPR001932 -
Trre2g00585 339 ProSitePatterns PPM-type phosphatase domain signature. 110 118 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00585 Trre-Chr2 4779473 4783083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00585 46 336 PP2C-type Phosphatase Gene Family AT4G31750 90.476 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00585 K17506 - gmx:547661 570.852