Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00580 ATGAGAAGTATACCCACCACAATGCTAAACACACACCCCAACAATACCAACACAACCATTACTCACTCATTATGGCAAACTCCAATCCCATATCTCTTTGGAGGTTTAGCTGCCATTATGGGTCTCATAGCTTTGGCCTTGTTGGCACTAGCTTGCTCTTATTGTAAACTTTCAAGGAACAACCAAGATGGGTCCCACAATGACTTGGACAACAAAGAGAGTGACCCTCAAACTAAGGAACCCATCAAGGCCTACGAAGAGAAAATCCTTGTCATTATGGCTGGGAATGAAAATCCAACATTCTTGGCTACCCCTGTTGTTTTGTCCATCATTGACAAAGAAATTGACAACCTTGTACTTGTTCCAACTACTTCAACTCCACAAGAAAATGAAGGTTCTTGCTCTTCACAACATTGGCAGTGA 423 0.4208 MRSIPTTMLNTHPNNTNTTITHSLWQTPIPYLFGGLAAIMGLIALALLALACSYCKLSRNNQDGSHNDLDNKESDPQTKEPIKAYEEKILVIMAGNENPTFLATPVVLSIIDKEIDNLVLVPTTSTPQENEGSCSSQHWQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00580 140 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 10 111 IPR040359 GO:0080143
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00580 Trre-Chr2 4740466 4740888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00580 16 107 Glutamine Dumper (GDU) Family AT4G31730 51.020 2.78e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00580 - - tpra:123916214 214.157