Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00573 ATGAATTCTCTGTCACTCCTCCACAACACAAATGCAACTCTCCACTTGCACTCCTTCATCTTCTCCAAACCCACCCCTTCCTTCATCTCCCTCAAACCAAAACCCTCAACCACAATCCAATGCTCCAACAACAACAACATCATCGACATTGACATGGTAAAAACCAAACAAGGAACCTACGAACAAAAACAGAACAAAGTCGTAGTTCTATGGGACCTCGACAACAAACCACCACGTGGACCACCCTACGACACCACACTCTCTCAAAACCCTAGCCAAAAGTTTCAGCATACTCACCGACATCTCCGCTTAAGCTAA 318 0.456 MNSLSLLHNTNATLHLHSFIFSKPTPSFISLKPKPSTTIQCSNNNNIIDIDMVKTKQGTYEQKQNKVVVLWDLDNKPPRGPPYDTTLSQNPSQKFQHTHRHLRLS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00573 105 MobiDBLite consensus disorder prediction 74 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00573 Trre-Chr2 4674972 4675289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00573 4 84 C2H2 Transcription Factor Family AT5G52010 41.935 8.33e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00573 - - bvg:104900620 78.9517